Contig 008625:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS115H11-                                                               TCGAGTAC
                      ____________________________________________________________
consensus                                                                 TCGAGTAC
 
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JMFS115H11-           ATGGTTGTTGAAGATGATGATGCTCCTCTGTTAACGGCCGATAATGAGATAAAACTAGAG
                      ____________________________________________________________
consensus             ATGGTTGTTGAAGATGATGATGCTCCTCTGTTAACGGCCGATAATGAGATAAAACTAGAG
 
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JMFS115H11-           GTAGTGCAATGCATTAAGAGACTGCTCGATAGGTTTAGCCAACTCGTAGAGTCTTTACTG
rJMSF042F08+          GTAGTGCNATGCATTAAGAGACTGCTCGATAGGTTTAGCCAACTNGTAGAGTCTTTACTG
                      ____________________________________________________________
consensus             GTAGTGCAATGCATTAAGAGACTGCTCGATAGGTTTAGCCAACTCGTAGAGTCTTTACTG
 
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JMFS115H11-           TGCGATGTCCAAGAATCGATATCCGAGGACGGGAAATTGCAGTTATTTAAGTCGTGTTTA
rJMSF042F08+          TGCGATGTCCAAGAATCGATATCCGAGGACGGGAAATTGCAGTTATTTAAGTCGTGTTTA
                      ____________________________________________________________
consensus             TGCGATGTCCAAGAATCGATATCCGAGGACGGGAAATTGCAGTTATTTAAGTCGTGTTTA
 
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JMFS115H11-           TCGGATTTATCCTGGGCTTGCCAGATATTAACGAAATTGGAGATTATGAGAGATTTTGTT
rJMSF042F08+          TCGGATTTATCCTGGGCTTGCCAGATATTAACGAAATTGGAGATTATGAGAGATTTTGTT
                      ____________________________________________________________
consensus             TCGGATTTATCCTGGGCTTGCCAGATATTAACGAAATTGGAGATTATGAGAGATTTTGTT
 
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JMFS115H11-           CACAGATGGACAGAGATATCAGTTAAAATAATAAAGGTTGTTCAGCAGTTGAGCCCCGAA
rJMSF042F08+          CACAGATGGACAGAGATATCAGTTAAAATAATAAAGGTTGTTCAGCAGTTGAGCCCCGAA
                      ____________________________________________________________
consensus             CACAGATGGACAGAGATATCAGTTAAAATAATAAAGGTTGTTCAGCAGTTGAGCCCCGAA
 
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JMFS115H11-           GCTGAAACAATCGGGACCAAATTGAAGGTTCTTGAGGTGGCGGCAAAAGTCCTAGAGGCA
rJMSF042F08+          GCTGAAACAATCGGGACCAAATTGAAGGTTCTTGAGGTGGCGGCAAAAGTCCTAGAGGCA
                      ____________________________________________________________
consensus             GCTGAAACAATCGGGACCAAATTGAAGGTTCTTGAGGTGGCGGCAAAAGTCCTAGAGGCA
 
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JMFS115H11-           ATAGGATATGGCACGGTTATTCTGCCCGCGACGAAGCGCCTCCACATGGCAAAGGTCTGG
rJMSF042F08+          ATAGGATATGGCACGGTTATTCTGCCCGCGACGAAGCGCCTCCACATGGCAAAGGTCTGG
                      ____________________________________________________________
consensus             ATAGGATATGGCACGGTTATTCTGCCCGCGACGAAGCGCCTCCACATGGCAAAGGTCTGG
 
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JMFS115H11-           CTTCCGTTTGTCCGGGCAATTAAGCCTTTGAGTGATTCGGTGACTGCCGACAGTGACGAT
rJMSF042F08+          CTTCCGTTTGTCCGGGCAATTAAGCCTTTGAGTGATTCGGTGACTGCCGACAGTGACGAT
                      ____________________________________________________________
consensus             CTTCCGTTTGTCCGGGCAATTAAGCCTTTGAGTGATTCGGTGACTGCCGACAGTGACGAT
 
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JMFS115H11-           GATCTGATTCCGAAAATAGACGGTGATCTATGGCAATCCTTAGAGGCGTCGTTTGTTTCA
rJMSF042F08+          GATCTGATTCCGAAAATAGACGGTGATCTATGGCAATCCTTAGAGGCGTCGTTTGTTTCA
                      ____________________________________________________________
consensus             GATCTGATTCCGAAAATAGACGGTGATCTATGGCAATCCTTAGAGGCGTCGTTTGTTTCA
 
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JMFS115H11-           ATGATACTTACATTGCCCTCGGCAGATCAGGCGGAGATCTTGACGGAGTGGTGGACAAAC
rJMSF042F08+          ATGATACTTACATTGCCCTCGGCAGATCAGGCGGAGATCTTGACGGAGTGGTGGACAAAC
                      ____________________________________________________________
consensus             ATGATACTTACATTGCCCTCGGCAGATCAGGCGGAGATCTTGACGGAGTGGTGGACAAAC
 
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JMFS115H11-           CAGCATGTCCAGTATCCAGACCTCACCGAGGCC                           
rJMSF042F08+          CAGCATGTCCAGTATCCAGACCTCACCGAGGCCTTTGAAGCGTGGTGTTATAGATCCAAG
                      ____________________________________________________________
consensus             CAGCATGTCCAGTATCCAGACCTCACCGAGGCCTTTGAAGCGTGGTGTTATAGATCCAAG
 
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rJMSF042F08+          GCTGCCAAGCGAAGGCTGGCAATGCTCGAAGGAGATCATAGCACCGCCAATCCAGTATGA
                      ____________________________________________________________
consensus             GCTGCCAAGCGAAGGCTGGCAATGCTCGAAGGAGATCATAGCACCGCCAATCCAGTATGA
 
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rJMSF042F08+          TCACTTCTTCCGACAGATTAGAACACCGTTTTGTCAATCTAATCGTTAGGAACTGGAAAT
                      ____________________________________________________________
consensus             TCACTTCTTCCGACAGATTAGAACACCGTTTTGTCAATCTAATCGTTAGGAACTGGAAAT
 
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rJMSF042F08+          TTTTTTCTTCTGTTCTCGACATGGCTAAAATGGTCTCGGTTTTGTAAATTCATACCCGTA
                      ____________________________________________________________
consensus             TTTTTTCTTCTGTTCTCGACATGGCTAAAATGGTCTCGGTTTTGTAAATTCATACCCGTA
 
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rJMSF042F08+          CTTCTGGCACCCCATTCCGTTCGATTGTTTTAATCGTGGGGCCTTTTGTAAAACTCGAGT
                      ____________________________________________________________
consensus             CTTCTGGCACCCCATTCCGTTCGATTGTTTTAATCGTGGGGCCTTTTGTAAAACTCGAGT