Contig 008624:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF041E12Sequence125009490 (3)520008624 (3)ref|XP_011079923.1|2e-06PREDICTED: BEACH domain-containing protein lvsA isoform X2 [Sesamum indicum]
JMSF041G12Sequence125009490 (3)521008624 (3)ref|XP_011079923.1|2e-06PREDICTED: BEACH domain-containing protein lvsA isoform X2 [Sesamum indicum]
JMSF042E12Sequence125009490 (3)535008624 (3)ref|XP_011079923.1|2e-10PREDICTED: BEACH domain-containing protein lvsA isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF041G12+             TNTNTCNAAAAAAAAAAAGAGCAAAAAAATAATCGAAGCTAGATCATCCGAATAAGA
rJMSF041E12+                    AAAAAAAAAAAGAGCAAAAAAATAATCGAAGCTAGATCATCCGAATAAGA
rJMSF042E12+                    AAAAAAAAAAAGAGCAAAAAAATAATCGAAGCTAGATCATCCGAATAAGA
                      ____________________________________________________________
consensus                TNTNTCNAAAAAAAAAAAGAGCAAAAAAATAATCGAAGCTAGATCATCCGAATAAGA
 
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rJMSF041G12+          GGAAAAATCGGATTAAAAAACTGATCAAAATATCCAGATCTTGCTGCTTTCAATCAATTT
rJMSF041E12+          GGAAAAATCGGATTAAAAAACTGATCAAAATATCCAGATCTTGCTGCTTTCAATCAATTT
rJMSF042E12+          GGAAAAATCGGATTAAAAAACTGATCAAAATATCCAGATCTTGCTGCTTTCAATCAATTT
                      ____________________________________________________________
consensus             GGAAAAATCGGATTAAAAAACTGATCAAAATATCCAGATCTTGCTGCTTTCAATCAATTT
 
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rJMSF041G12+          ATTTATTTCTGCTTTTCTTCACATTTTATGTGAATTATATTGTTGGTAGATAGGTAGACA
rJMSF041E12+          ATTTATTTCTGCTTTTCTTCACATTTTATGTGAATTATATTGTTGGTAGATAGGTAGACA
rJMSF042E12+          ATTTATTTCTGCTTTTCTTCACATTTTATGTGAATTATATTGTTGGTAGATAGGTAGACA
                      ____________________________________________________________
consensus             ATTTATTTCTGCTTTTCTTCACATTTTATGTGAATTATATTGTTGGTAGATAGGTAGACA
 
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rJMSF041G12+          GAGACATATAATCGTCTGGTTTTTTTATGTATTGAGCTGAGAGATCCTTCTAGAGCTCTG
rJMSF041E12+          GAGACATATAATCGTCTGGTTTTTTTATGTATTGAGCTGAGAGATCCTTCTAGAGCTCTG
rJMSF042E12+          GAGACATATAATCGTCTGGTTTTTTTATGTATTGAGCTGAGAGATCCTTCTAGAGCTCTG
                      ____________________________________________________________
consensus             GAGACATATAATCGTCTGGTTTTTTTATGTATTGAGCTGAGAGATCCTTCTAGAGCTCTG
 
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rJMSF041G12+          CCTAGAAGGGATCGGATCTGCCTGGGATTGAACTAATCGGCGGTCGGGTTGTTCGTCGGA
rJMSF041E12+          CCTAGAAGGGATCGGATCTGCCTGGGATTGAACTAATCGGCGGTCGGGTTGTTCGTCGGA
rJMSF042E12+          CCTAGAAGGGATCGGATCTGCCTGGGATTGAACTAATCGGCGGTCGGGTTGTTCGTCGGA
                      ____________________________________________________________
consensus             CCTAGAAGGGATCGGATCTGCCTGGGATTGAACTAATCGGCGGTCGGGTTGTTCGTCGGA
 
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rJMSF041G12+          TGAGAGACGGCGTTGAATGTTCGGGAAATCGGCCGGGAGAACGATGAAATGGGCATCATT
rJMSF041E12+          TGAGAGACGGCGTTGAATGTTCGGGAAATCGGCCGGGAGAACGATGAAATGGGCATCATT
rJMSF042E12+          TGAGAGACGGCGTTGAATGTTCGGGAAATCGGCCGGGAGAACGATGAAATGGGCATCATT
                      ____________________________________________________________
consensus             TGAGAGACGGCGTTGAATGTTCGGGAAATCGGCCGGGAGAACGATGAAATGGGCATCATT
 
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rJMSF041G12+          GCTTAAAGACTTTAAGGAAAAGGTCGGCCTCGCTCAGCCTCCTTCCGCTGTCTCCTCACC
rJMSF041E12+          GCTTAAAGACTTTAAGGAAAAGGTCGGCCTCGCTCAGCCTCCTTCCGCTGTCTCCTCACC
rJMSF042E12+          GCTTAAAGACTTTAAGGAAAAGGTCGGCCTCGCTCAGCCTCCTTCCGCTGTCTCCTCACC
                      ____________________________________________________________
consensus             GCTTAAAGACTTTAAGGAAAAGGTCGGCCTCGCTCAGCCTCCTTCCGCTGTCTCCTCACC
 
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rJMSF041G12+          TTCGGCTTCTGCTTCCTCGTCATTTCACGATAACTATGCCTTGCCTACCAACCTCAATCT
rJMSF041E12+          TTCGGCTTCTGCTTCCTCGTCATTTCACGATAACTATGCCTTGCCTACCAACCTCAATCT
rJMSF042E12+          TTCGGCTTCTGCTTCCTCGTCATTTCACGATAACTATGCCTTGCCTACCAACCTCAATCT
                      ____________________________________________________________
consensus             TTCGGCTTCTGCTTCCTCGTCATTTCACGATAACTATGCCTTGCCTACCAACCTCAATCT
 
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rJMSF041G12+          CGACTTCAGCTTATCTCCTTCGAGAGACAAAC                            
rJMSF041E12+          CGACTTCAGCTTATCTCCTTCGAGAGACAAAC                            
rJMSF042E12+          CGACTTCAGCTTATCTCCTTCGAGAGACAAACATGAATTGGAATTGGACTCAAGAGATAT
                      ____________________________________________________________
consensus             CGACTTCAGCTTATCTCCTTCGAGAGACAAACATGAATTGGAATTGGACTCAAGAGATAT