| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF001L01 | Sequence | 451 | 007729 (2) | ref|XP_010677415.1| | 5e-15 | PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Beta vu | 697 | 008623 (3) | ref|XP_004245932.1| | 1e-93 | PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Solanum |
| JMSF017B03 | Sequence | 282 | 005306 (2) | 745 | 008623 (3) | ref|XP_004245932.1| | 2e-104 | PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Solanum | |||
| JMSF041L16 | Sequence | 660 | 007729 (2) | ref|XP_010677415.1| | 3e-58 | PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Beta vu | 705 | 008623 (3) | ref|XP_009618552.1| | 1e-68 | PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Nicotia |
This contig is upended
. : . : . : . : . : . :
rJMSF017B03+ GCTCTGGACTTGATCCAGTTTTAGGGTATTATCTTACAAAGGCC
____________________________________________________________
consensus GCTCTGGACTTGATCCAGTTTTAGGGTATTATCTTACAAAGGCC
. : . : . : . : . : . :
rJMSF017B03+ TCAGCTAATCCTGGAGCTGGTGACATTTTAATGGGATTTTTGGGATCAG-TTATCATCTC
rJMSF001L01+ GAGCTGGTGACATTTTAATGGGATTTTTGGGATCAG-TTATCATCTC
rJMSF041L16+ GAGCTGGTGACATTTTAATGGGATTTTTGGGATCAGNTTATCATCTC
____________________________________________________________
consensus TCAGCTAATCCTGGAGCTGGTGACATTTTAATGGGATTTTTGGGATCAG-TTATCATCTC
. : . : . : . : . : . :
rJMSF017B03+ CTTTGCTTTCTCAATGTTCAAACAAAGAAAGCTTGTTAAGCGACATGCGGCTGAGA-TTT
rJMSF001L01+ CTTTGCTTTCTCAATGTTCAAACAAAGAAAGCTTGTTAAGCGACATGCGGCTGAGA-TTT
rJMSF041L16+ CTTTGC-TTCTCAATGTTCAAACAAAGAAAGCTTGTTAAGCGACATGCGGCTGAGATTTT
____________________________________________________________
consensus CTTTGCTTTCTCAATGTTCAAACAAAGAAAGCTTGTTAAGCGACATGCGGCTGAGA-TTT
. : . : . : . : . : . :
rJMSF017B03+ TCACCTCTGTCATAATTTCTTCATTATTCTCGTTGTATTCTACTGCTTTCATTGGGCGGC
rJMSF001L01+ TCACCTCTGTCATAATTTCTTCATTATTCTCGTTGTATTCTACTGCTTTCATTGGGCGGC
rJMSF041L16+ TCACCTCTGTCATAATTTCTTCATTATTCTCGTTGTATTCTACTGCTTTCATTGGGCGGC
____________________________________________________________
consensus TCACCTCTGTCATAATTTCTTCATTATTCTCGTTGTATTCTACTGCTTTCATTGGGCGGC
. : . : . : . : . : . :
rJMSF017B03+ TTGTTGGCTTAGAACCCGATTTAACAATATCGATTCTACCACGATGTATAACAGTCGCGC
rJMSF001L01+ TTGTTGGCTTAGAACCCGATTTAACAATATCGATTCTACCACGATGTATAACAGTCGCGC
rJMSF041L16+ TTGTTGGCTTAGAACCCGATTTAACAATATCGATTCTACCACGATGTATAACAGTCGCGC
____________________________________________________________
consensus TTGTTGGCTTAGAACCCGATTTAACAATATCGATTCTACCACGATGTATAACAGTCGCGC
. : . : . : . : . : . :
rJMSF017B03+ TTGCTCTAAGCATTGTTTCTTTCTTTGAAGGTGCCAATTCGTCTCTCACGGCTGCTGTTG
rJMSF001L01+ TTGCTCTAAGCATTGTTTCTTTCTTTGAAGGTGCCAATTCGTCTCTCACGGCTGCTGTTG
rJMSF041L16+ TTGCTCTAAGCATTGTTTCTTTCTTTGAAGGTGCCAATTCGTCTCTCACGGCTGCTGTTG
____________________________________________________________
consensus TTGCTCTAAGCATTGTTTCTTTCTTTGAAGGTGCCAATTCGTCTCTCACGGCTGCTGTTG
. : . : . : . : . : . :
rJMSF017B03+ TTGTACTAACTGGTCTTGTGGGTGCCAATTTTGTTCAGACGGTGTTAGATAGGCTTGGCT
rJMSF001L01+ TTGTACTAACTGGTCTTGTGGGTGCCAATTTTGTTCAGACGGTGTTAGATAGGCTTGGCT
rJMSF041L16+ TTGTACTAACTGGTCTTGTGGGTGCCAATTTTGTTCAGACGGTGTTAGATAGGCTTGGCT
____________________________________________________________
consensus TTGTACTAACTGGTCTTGTGGGTGCCAATTTTGTTCAGACGGTGTTAGATAGGCTTGGCT
. : . : . : . : . : . :
rJMSF017B03+ TCACCGATCCTATTGCTCGAGGAATAGCAACTGCTTCTAGTGCTCATGGATTGGGTACAG
rJMSF001L01+ TCACCGATCCTATTGCTCGAGGAATAGCAACTGCTTCTAGTGCTCATGGATTGGGTACAG
rJMSF041L16+ TCACCGATCCTATTGCTCGAGGAATAGCAACTGCTTCTAGTGCTCATGGATTGGGTACAG
____________________________________________________________
consensus TCACCGATCCTATTGCTCGAGGAATAGCAACTGCTTCTAGTGCTCATGGATTGGGTACAG
. : . : . : . : . : . :
rJMSF017B03+ CAGCGTTGTCGGCCAAGGAACCCGAAGCCCTTCCATTCTGTGCGATTGCATATGCTCTGA
rJMSF001L01+ CAGCGTTGTCGGCCAAGGAACCCGAAGCCCTTCCATTCTGTGCGATTGCATATGCTCTGA
rJMSF041L16+ CAGCGTTGTCGGCCAAGGAACCCGAAGCCCTTCCATTCTGTGCGATTGCATATGCTCTGA
____________________________________________________________
consensus CAGCGTTGTCGGCCAAGGAACCCGAAGCCCTTCCATTCTGTGCGATTGCATATGCTCTGA
. : . : . : . : . : . :
rJMSF017B03+ CGGGTATATTCGGTTCATTGATTTGCTCAGTTCCTGCAGTGAGACAGAGCTTAATTGCAA
rJMSF001L01+ CGGGTATATTCGGTTCATTGATTTGCTCAGTTCCTGCAGTGAGACAGAGCTTAATTGCAA
rJMSF041L16+ CGGGTATATTCGGTTCATTGATTTGCTCAGTTCCTGCAGTGAGACAGAGCTTAATTGCAA
____________________________________________________________
consensus CGGGTATATTCGGTTCATTGATTTGCTCAGTTCCTGCAGTGAGACAGAGCTTAATTGCAA
. : . : . : . : . : . :
rJMSF017B03+ TAGTTGGTTGAATAGGAGGACTTGGTATTTGCAAGTGAAATCCTCTTTATTCCATTCTTA
rJMSF001L01+ TAGTTGGTTGAATAGGAGGACTTGGTATTTGCAAGTGAAATCCTCTTTATTCCATTCTTA
rJMSF041L16+ TAGTTGGTTGAATAGGAGGACTTGGTATTTGCAAGTGAAATCCTCTTTATTCCATTCTTA
____________________________________________________________
consensus TAGTTGGTTGAATAGGAGGACTTGGTATTTGCAAGTGAAATCCTCTTTATTCCATTCTTA
. : . : . : . : . : . :
rJMSF017B03+ CCAATCTCTTTCTCTATATATATTTGGTTGATGTGCAGAGCTATTTATTTAGCCCTTTTG
rJMSF001L01+ CCAATCTCTTTCTCTATATATATTTGGTTGATGTGCAGAGCTATTTATTTAGCCCTTTTG
rJMSF041L16+ CCAATCTCTTTCTCTATATATATTTGGTTGATGTGCAGAGCTATTTATTTAGCCCTTTTG
____________________________________________________________
consensus CCAATCTCTTTCTCTATATATATTTGGTTGATGTGCAGAGCTATTTATTTAGCCCTTTTG
. : . : . : . : . : . :
rJMSF017B03+ TGTTTTGCATGTTGTCAAAGACAAGGAC
rJMSF001L01+ TGTTTTGCATGTTGTCAAAGACCAAGGACAATGTATGTATATG
rJMSF041L16+ TGTTTTGCATGTTGTCAAAGA-CAAGGACAATGTATGTATATGTATATATATTGAAAATA
____________________________________________________________
consensus TGTTTTGCATGTTGTCAAAGACCAAGGACAATGTATGTATATGTATATATATTGAAAATA