Contig 008620:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041G21+                                                                    AA
                      ____________________________________________________________
consensus                                                                       AA
 
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rJMSF029M08+              TTGGACGGCCCAGAAGCCTTGTTCTCAGTACCAAGAGTTACTCCTCTACAAGGATC
rJMSF041G21+          TTCTTTGGACGGCCCAGAAGCCTTGTTCTCAGTACCAAGAGTTACTCCTCTACAAGGATC
                      ____________________________________________________________
consensus             TTCTTTGGACGGCCCAGAAGCCTTGTTCTCAGTACCAAGAGTTACTCCTCTACAAGGATC
 
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rJMSF029M08+          TTCGCTT-CAAGCCACCTCAAATCCAAATATCGGGATCAGCAAATTGCTTGAAGGAGCTT
rJMSF041G21+          TTCGCTTNCAAGCCACCTCAAATCCAAATATCGGGATCAGCAAATTGCTTGAAGGAGCTT
                      ____________________________________________________________
consensus             TTCGCTTNCAAGCCACCTCAAATCCAAATATCGGGATCAGCAAATTGCTTGAAGGAGCTT
 
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rJMSF029M08+          TTGGTGAACAATTGGTTCCTTGTCAGTGTGGCCATGGTTGCTGTGGAAATTCACCTCAAG
rJMSF041G21+          TTGGTGAACAATTGGTTCCTTGTCAGTGTGGCCATGGTTGCTGTGGAAATTCACCTCAAG
                      ____________________________________________________________
consensus             TTGGTGAACAATTGGTTCCTTGTCAGTGTGGCCATGGTTGCTGTGGAAATTCACCTCAAG
 
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rJMSF029M08+          GAAATCATAACAGTTCCTTACTGGGTCCTGAGTTCGTTGACTATTCAGAGTCTCCATCCT
rJMSF041G21+          GAAATCATAACAGTTCCTTACTGGGTCCTGAGTTCGTTGACTATTCAGAGTCTCCATCCT
                      ____________________________________________________________
consensus             GAAATCATAACAGTTCCTTACTGGGTCCTGAGTTCGTTGACTATTCAGAGTCTCCATCCT
 
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rJMSF029M08+          TCCCAATCCATGAATTGGCTGCATTAGCCACCGACATAAGTAACGTCGCTTGGCGTAATA
rJMSF041G21+          TCCCAATCCATGAATTGGCTGCATTAGCCACCGACATAAGTAACGTCGCTTGGCGTAATA
                      ____________________________________________________________
consensus             TCCCAATCCATGAATTGGCTGCATTAGCCACCGACATAAGTAACGTCGCTTGGCGTAATA
 
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rJMSF029M08+          GTGGATTGGAAAATGGAAGCATCAACTTGTTCTCCAATTCAGCTAGTAGTGTGATGTGTG
rJMSF041G21+          GTGGATTGGAAAATGGAAGCATCAACTTGTTCTCCAATTCAGCTAGTAGTGTGATGTGTG
                      ____________________________________________________________
consensus             GTGGATTGGAAAATGGAAGCATCAACTTGTTCTCCAATTCAGCTAGTAGTGTGATGTGTG
 
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rJMSF029M08+          GCGCCTCTCATGCACAAGGAGAAAGTTTGGAGGAGATGAGGAAGAGCGACCACCATTCAC
rJMSF041G21+          GCGCCTCTCATGCACAAGGAGAAAGTTTGGAGGAGATGAGGAAGAGCGACCACCATTCAC
                      ____________________________________________________________
consensus             GCGCCTCTCATGCACAAGGAGAAAGTTTGGAGGAGATGAGGAAGAGCGACCACCATTCAC
 
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rJMSF029M08+          AGCTTGAAAAGGGCAAGGCATTGATGGCAGATCCAGCTTCAACACCAATATCTAGACAAC
rJMSF041G21+          AGCTTGAAAAGGGCAAGGCATTGATGGCAGATCCAGCTTCAACACCAATATCTAGACAAC
                      ____________________________________________________________
consensus             AGCTTGAAAAGGGCAAGGCATTGATGGCAGATCCAGCTTCAACACCAATATCTAGACAAC
 
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rJMSF029M08+          CTCTACAAGTAAATACTAAAACTTGAAGCACGAGCTAATCGGGTGAATTCATTCGCATAA
rJMSF041G21+          CTCTACAAGTAAATACTAAAACTTGAAGCACGAGCTAATCGGGTGAATTCATTCGCATAA
                      ____________________________________________________________
consensus             CTCTACAAGTAAATACTAAAACTTGAAGCACGAGCTAATCGGGTGAATTCATTCGCATAA
 
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rJMSF029M08+          TTTGGTAAAATTTTCAAAGCCACANGACAAGTAAGTAATCCAGAATNCATTATCGTGTAT
rJMSF041G21+          TTTGGTAAAATTTTCAAAGCCACATGACAAGTAAGTAATCCAGAATACATTATCGTGTAT
                      ____________________________________________________________
consensus             TTTGGTAAAATTTTCAAAGCCACATGACAAGTAAGTAATCCAGAATACATTATCGTGTAT
 
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rJMSF029M08+          TNGAGCCTNTAATCANTAAA                                        
rJMSF041G21+          TTGAGCCTCTAATCAGTAAAATATCTTGGCCTTGGCCCATGGCTTAGAGTTGCTCACAAA
                      ____________________________________________________________
consensus             TTGAGCCTCTAATCAGTAAAATATCTTGGCCTTGGCCCATGGCTTAGAGTTGCTCACAAA
 
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rJMSF041G21+          TTGTTCAAGCTAAAAGCCTAAAACAGTCTTGAGTCCTTGCATTAACGTGCGGAGAGATGG
                      ____________________________________________________________
consensus             TTGTTCAAGCTAAAAGCCTAAAACAGTCTTGAGTCCTTGCATTAACGTGCGGAGAGATGG