Contig 008613:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF040I16Sequence686023265ref|XP_009587456.1|7e-110PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Nicotiana tomentosi849008613 (2)ref|XP_004233561.1|2e-63PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Solanum lycopersicu
JMSF051D04Sequence629023295733008613 (2)ref|XP_004233561.1|6e-43PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Solanum lycopersicu

Alignment

This contig is upended


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rJMSF040I16+                                                             AAGTTGAGG
                      ____________________________________________________________
consensus                                                                AAGTTGAGG
 
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rJMSF040I16+          AGAAATTATCACGAGGGATGGGGTGGTGAGAATGCATATCATGTGAGTGGGTACCGCTAT
                      ____________________________________________________________
consensus             AGAAATTATCACGAGGGATGGGGTGGTGAGAATGCATATCATGTGAGTGGGTACCGCTAT
 
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rJMSF051D04+                                                      GGGAAAAGTAACAACT
rJMSF040I16+          TTGCTGGTAGACAGTGATAGATATATCTCTAGAGCTTCTCCGACGGGAAAAGTAACAACT
                      ____________________________________________________________
consensus             TTGCTGGTAGACAGTGATAGATATATCTCTAGAGCTTCTCCGACGGGAAAAGTAACAACT
 
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rJMSF051D04+          CTGACAAAGGATTCTTTAATTGCACTGACTAAGCTTCGAGAAGAGGTTGATTTGGAAAGA
rJMSF040I16+          CTGACAAAGGATTCTTTAATTGCACTGACTAAGCTTCGAGAAGAGGTTGATTTGGAAAGA
                      ____________________________________________________________
consensus             CTGACAAAGGATTCTTTAATTGCACTGACTAAGCTTCGAGAAGAGGTTGATTTGGAAAGA
 
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rJMSF051D04+          AACAGAGCAAAGTGTGATGTTTCTGGCAATGAAAAAGATCAAGAAATATGTATCAGAGCC
rJMSF040I16+          AACAGAGCAAAGTGTGATGTTTCTGGCAATGAAAAAGATCAAGAAATATGTATCAGAGCC
                      ____________________________________________________________
consensus             AACAGAGCAAAGTGTGATGTTTCTGGCAATGAAAAAGATCAAGAAATATGTATCAGAGCC
 
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rJMSF051D04+          AAAAACAATGCTTGGGTGATTGCTAGGCTAACAAGAGGGAAGGTTCTTTTCATGGTTCTT
rJMSF040I16+          AAAAACAATGCTTGTGTGATTGCTAGGCTAACAAGAGGGAAGGTTCTTTTCATGGTTCTT
                      ____________________________________________________________
consensus             AAAAACAATGCTTGTGTGATTGCTAGGCTAACAAGAGGGAAGGTTCTTTTCATGGTTCTT
 
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rJMSF051D04+          GAGAAGGCCAATGAGACACTTCTCTATGCCAATGATACTGTTGAGAAATTCAGTGACAGG
rJMSF040I16+          GAGAAGGCCAATGAGACACTTCTCTATGCCAATGATACTGTTGAGAAATTCAGTGACAGG
                      ____________________________________________________________
consensus             GAGAAGGCCAATGAGACACTTCTCTATGCCAATGATACTGTTGAGAAATTCAGTGACAGG
 
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rJMSF051D04+          TATTGCAATGGAGCTTTTTCCCTGGGGTGATGATTATCATCTTTAGTTTTCGTACTCATA
rJMSF040I16+          TATTGCAATGGAGCTTTTTCCCTGGGGTGATGATTATCATCTTTAGTTTTCGTACTCATA
                      ____________________________________________________________
consensus             TATTGCAATGGAGCTTTTTCCCTGGGGTGATGATTATCATCTTTAGTTTTCGTACTCATA
 
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rJMSF051D04+          TGAAGGAGAGACACTTGGAACACTTGTTTTAACTTAGGCACTTAAATGTTATACTTGGTG
rJMSF040I16+          TGAAGGAGAGACACTTGGAACACTTGTTTTAACTTAGGCACTTAAATGTTATACTTGGTG
                      ____________________________________________________________
consensus             TGAAGGAGAGACACTTGGAACACTTGTTTTAACTTAGGCACTTAAATGTTATACTTGGTG
 
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rJMSF051D04+          CTCTGATAATATGAGATTGGTGACAAAGGAATATACCCCCGAATATGCTTCTAGTACTGC
rJMSF040I16+          CTCTGATAATATGAGATTGGTGACAAAGGAATATACCCCCGAATATGCTTCTAGTACTGC
                      ____________________________________________________________
consensus             CTCTGATAATATGAGATTGGTGACAAAGGAATATACCCCCGAATATGCTTCTAGTACTGC
 
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rJMSF051D04+          CTATGATTTGGAGAATGGTTGGACTGGCTCCAATCAGTTGGAAAGGGATTTGATATTACA
rJMSF040I16+          CTATGATTTGGAGAATGGTTGGACTGGCTCCAATCAGTTGGAAAGGGATTTGATATTACA
                      ____________________________________________________________
consensus             CTATGATTTGGAGAATGGTTGGACTGGCTCCAATCAGTTGGAAAGGGATTTGATATTACA
 
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rJMSF051D04+          ACTGCCATAAAGTATATTGTACACGTTCGCAAATATGTTGATCATCTTCAGGTTGAGTTT
rJMSF040I16+          ACTGCCATAAAGTATATTGTACACGTTCGCAAATATGTTGATCATCTTCAGGTTGAGTTT
                      ____________________________________________________________
consensus             ACTGCCATAAAGTATATTGTACACGTTCGCAAATATGTTGATCATCTTCAGGTTGAGTTT
 
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rJMSF051D04+          TACAAAGGTAGCAATGCTGGAACACCATGCTATGCTATATTCCATGTATTAACCTAATTG
rJMSF040I16+          TACAAAGGTAGCAATGCTGGAACACCATGCTATGCTATATTCCATGTATTAACCTAATTG
                      ____________________________________________________________
consensus             TACAAAGGTAGCAATGCTGGAACACCATGCTATGCTATATTCCATGTATTAACCTAATTG
 
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rJMSF051D04+          TACACTAGCTTTCCTTTTTGCCTCTTTGTGATTTCTTGGAAGAGGTTAAATTAAGAACAT
rJMSF040I16+          TACACTAGCTTTCCTTTTTGCCTCTTTGTGATTTCTTGGAAGAGGTTAAATTAAGAACAT
                      ____________________________________________________________
consensus             TACACTAGCTTTCCTTTTTGCCTCTTTGTGATTTCTTGGAAGAGGTTAAATTAAGAACAT
 
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rJMSF051D04+          GACACTCTTGTGAATGTACAGATATCTAGATTATTCTATGTAC                 
rJMSF040I16+          GACACTCTTGTGAATGTACAGATATCTAGATTATTCTATGTACCTTGAGGACAAATCTCA
                      ____________________________________________________________
consensus             GACACTCTTGTGAATGTACAGATATCTAGATTATTCTATGTACCTTGAGGACAAATCTCA