Contig 008610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011N11Sequence239002396 (7)768008610 (3)gb|KCW59892.1|3e-31hypothetical protein EUGRSUZ_H026192, partial [Eucalyptus grandis]
JMSF040B08Sequence667002396 (7)778008610 (3)gb|KCW59892.1|3e-31hypothetical protein EUGRSUZ_H026192, partial [Eucalyptus grandis]
JMSF041D20Sequence756002396 (7)645008610 (3)gb|KCW59892.1|1e-31hypothetical protein EUGRSUZ_H026192, partial [Eucalyptus grandis]

Alignment

This contig is upended


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rJMSF011N11+                     AATGTGGTGGTGCTATCGGTGGTATTGGAGGAGGTGAAGAACAAGAACA
rJMSF040B08+            GCGATTGATAATGTGGTGGTGCTATCGGTGGTATTGGAGGAGNTGAAGAACAAGAACA
                      ____________________________________________________________
consensus               GCGATTGATAATGTGGTGGTGCTATCGGTGGTATTGGAGGAGGTGAAGAACAAGAACA
 
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rJMSF011N11+          TTTCTGTTTATAATAGACTTAGAGCCCTATGTAGCAATTCTCTCAGGAAGTTCTTTGTCT
rJMSF040B08+          TTTCTGTTTATAATAGACTTAGAGCCCTATGTAGCAATTCTCTCAGGAAGTTCTTTGTCT
                      ____________________________________________________________
consensus             TTTCTGTTTATAATAGACTTAGAGCCCTATGTAGCAATTCTCTCAGGAAGTTCTTTGTCT
 
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rJMSF011N11+          TTTCCAATGAGTACCATAAGGATACATATGTGAAGGCCATGCCTGGTGAAAGTCCAAATG
rJMSF041D20+             CCAATGAGTACCATAAGGATACATATGTGAAGGCCATGCCTGGTGAAAGTCCAAATG
rJMSF040B08+          TTTCCAATGAGTACCATAAGGATACATATGTGAAGGCCATGCCTGGTGAAAGTCCAAATG
                      ____________________________________________________________
consensus             TTTCCAATGAGTACCATAAGGATACATATGTGAAGGCCATGCCTGGTGAAAGTCCAAATG
 
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rJMSF011N11+          ATCGTAATGACAGGGAATTCCATAAATGGAGTCTAAAGCTGCTGTCAAATACCAACCTTT
rJMSF041D20+          ATCGTAATGACAGGGAATTCCATAAATGGAGTCTAAAGCTGCTGTCAAATACCAACCTTT
rJMSF040B08+          ATCGTAATGACAGGGAATTCCATAAATGGAGTCTAAAGCTGCTGTCAAATACCAACCTTT
                      ____________________________________________________________
consensus             ATCGTAATGACAGGGAATTCCATAAATGGAGTCTAAAGCTGCTGTCAAATACCAACCTTT
 
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rJMSF011N11+          GAGAGGGGGGAGAAATAGATGGGCACTTGAAGATATTGGAAATCTTGTGATTGCTCCTGT
rJMSF041D20+          GAGAGGGGGGAGAAATAGATGGGCACTTGAAGATATTGGAAATCTTGTGATTGCTCCTGT
rJMSF040B08+          GAGAGGGGGGAGAAATAGATGGGCACTTGAAGATATTGGAAATCTTGTGATTGCTCCTGT
                      ____________________________________________________________
consensus             GAGAGGGGGGAGAAATAGATGGGCACTTGAAGATATTGGAAATCTTGTGATTGCTCCTGT
 
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rJMSF011N11+          TGTTGATAGTAAACCGCAGACCCGCCCCATCACAAGAAGCTTTACTGCACAATGTCTATG
rJMSF041D20+          TGTTGATAGTAAACCGCAGACCCGCCCCATCACAAGAAGCTTTACTGCACAATGTCTATG
rJMSF040B08+          TGTTGATAGTAAACCGCAGACCCGCCCCATCACAAGAAGCTTTACTGCACAATGTCTATG
                      ____________________________________________________________
consensus             TGTTGATAGTAAACCGCAGACCCGCCCCATCACAAGAAGCTTTACTGCACAATGTCTATG
 
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rJMSF011N11+          AAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAATATCAATGAACA
rJMSF041D20+          AAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAATATCAATGAACA
rJMSF040B08+          AAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAATATCAATGAACA
                      ____________________________________________________________
consensus             AAGAGGTTCTGGAGATTGTTTCTTATATGACATTTTACTCGCCAAAAATATCAATGAACA
 
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rJMSF011N11+          TGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGGCTATTGATTATTTCC
rJMSF041D20+          TGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGGCTATTGATTATTTCC
rJMSF040B08+          TGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGGCTATTGATTATTTCC
                      ____________________________________________________________
consensus             TGTGGAGTCTCTGGCCATTAATGATGGAGGCCCTTGCAGACTGGGCTATTGATTATTTCC
 
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rJMSF011N11+          CAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAACATTTCCTTACTT
rJMSF041D20+          CAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAACATTTCCTTACTT
rJMSF040B08+          CAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAACATTTCCTTACTT
                      ____________________________________________________________
consensus             CAAACATATTGGTTCCATTGGACAACTATATATCGAGGAGCACTGAACATTTCCTTACTT
 
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rJMSF011N11+          GCAAGGAGAAGGTCATGACATCAATGGAGAAACCCTCGTATACAATGCGTGTTCCAAGGA
rJMSF041D20+          GCAAGGAGAAGGTCATGACATCAATGGAGAAACCCTCGTATACAATGCGTGTTCCAAGGA
rJMSF040B08+          GCAAGGAGAAGGTCATGACATCAATGGAGAAACCCTCGTATACAATGCGTGTTCCAAGGA
                      ____________________________________________________________
consensus             GCAAGGAGAAGGTCATGACATCAATGGAGAAACCCTCGTATACAATGCGTGTTCCAAGGA
 
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rJMSF011N11+          AGTCAGAACCGGATTACTATTTGGGCCAAGTACTGCCAGTACTCCAGCGAAGACGTGTAT
rJMSF041D20+          AGTCAGAACCGGATTACTATTTGGGCCAAGTACTGCCAGTACTCCAGCGAAGACGTGTAT
rJMSF040B08+          AGTCAGAACCGGATTACTATTTGGGCCAAGTACTGCCAGTACTCCAGCGAAGACGTGTAT
                      ____________________________________________________________
consensus             AGTCAGAACCGGATTACTATTTGGGCCAAGTACTGCCAGTACTCCAGCGAAGACGTGTAT
 
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rJMSF011N11+          GTAGGCGAGCTTGTTTCTGCTATTAGTTCTTTTCCAATGCTCAAGAAAATATATTTTTTG
rJMSF041D20+          GTAGGCGAGCTTGTTTCTGCTATTAGTTCTTTTCCAATGCTCAAGAAAATATATTTTTTG
rJMSF040B08+          GTAGGCGAGCTTGTTTCTGCTATTAGTTCTTTTCCAATGCTCAAGAAAATATATTTTTTG
                      ____________________________________________________________
consensus             GTAGGCGAGCTTGTTTCTGCTATTAGTTCTTTTCCAATGCTCAAGAAAATATATTTTTTG
 
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rJMSF011N11+          GCAAGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATTATTGTATTAAAGT 
rJMSF041D20+          GCAAGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATTAT            
rJMSF040B08+          GCAAGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATTATTGTATTAAAGTA
                      ____________________________________________________________
consensus             GCAAGTTTACCTCTTGTAGACAAAATTCATATGTTTTGATGATATTATTGTATTAAAGTA