Contig 008609:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN019M23Sequence642008609 (8)ref|XP_009613032.1|172PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|
JMFN033F16Sequence647008609 (8)ref|XP_009613032.1|206PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|
JMSF029G17Sequence660008609 (8)ref|XP_009613032.1|185PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|709008609 (8)ref|XP_009613032.1|185PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|
JMSF040A04Sequence670008609 (8)ref|XP_009613032.1|178PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|771008609 (8)ref|XP_009613032.1|206PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|
JMSF046K18Sequence717008609 (8)ref|XP_009613032.1|206PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|674008609 (8)ref|XP_009613032.1|206PREDICTED: uncharacterized protein LOC104106240 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046K18- ATTTGAATATG
JMSF046K18+ TTTTTTTTTTGTGATGAGAAATTTTCAACTTTAAAGTTTCACTTTGAATTTGAATATG
                      ____________________________________________________________
consensus TTTTTTTTTTGTGATGAGAAATTTTCAACTTTAAAGTTTCACTTTGAATTTGAATATG
 
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rJMSF046K18- AATGCATTTATAGAGAAGTGGAAGCAGACAGAAATAGAGATTATGATAATGAAGGATATA
JMSF046K18+ AATGCATTTATAGAGAAGTGGAAGCAGACAGAAATAGAGATTATGATAATGAAGGATATA
JMFN033F16+ AGCAGACAGAAATAGAGATTATGATAATGAAGGATATA
rJMSF029G17- AGCAGACAGAAATAGAGATTATGATAATGAAGGATATA
                      ____________________________________________________________
consensus AATGCATTTATAGAGAAGTGGAAGCAGACAGAAATAGAGATTATGATAATGAAGGATATA
 
. : . : . : . : . : . :
rJMSF046K18- TGTTATCCACACAATATATATGATGAGAAGGGAAAACCAATTTTGGTGTTCCTTTAGTGC
JMSF046K18+ TGTTATCCACACAATATATATGATGAGAAGGGAAAACCAATTTTGGTGTTCCTTTAGTGC
JMFN033F16+ TGTTATCCACACAATATATATGATGAGAAGGGAAAACCAATTTTGGTGTTCCTTTAGTGC
rJMSF029G17- TGTTATCCACACAATATATATGATGAGAAGGGAAAACCAATTTTGGTGTTCCTTTAGTGC
rJMSF040A04- CACAATATATATGATGAGAAGGGAAAACCAATTTTGGTGTTCCTTTAGTGC
                      ____________________________________________________________
consensus TGTTATCCACACAATATATATGATGAGAAGGGAAAACCAATTTTGGTGTTCCTTTAGTGC
 
. : . : . : . : . : . :
rJMSF046K18- TTATTTCCACATAATGCAGCATTTTTCTTGGAGGGTCTGAAAGTCAAAGCACTGAGGCTG
JMSF046K18+ TTATTTCCACATAATGCAGCATTTTTCTTGGAGGGTCTGAAAGTCAAAGCACTGAGGCTG
JMFN033F16+ TTATTTCCACATAATGCAGCATTTTTCTTGGAGGGTCTGAAAGTCAAAGCACTGAGGCTG
rJMSF029G17- TTATTTCCACATAATGCAGCATTTTTCTTGGAGGGTCTG-AAGTCAAAGCACTGAGGCTG
JMSF040A04+ ACTGAGGCTG
JMSF029G17+ ACATAATGCAGCATTTTTCTTGGAGGGTCTG-AAGTCAAAGCACTGAGGCTG
rJMSF040A04- TTATTTCCACATAATGCAGCATTTTTCTTGGAGGGTCTGAAAGTCAAAGCACTGAGGCTG
                      ____________________________________________________________
consensus TTATTTCCACATAATGCAGCATTTTTCTTGGAGGGTCTGAAAGTCAAAGCACTGAGGCTG
 
. : . : . : . : . : . :
rJMSF046K18- TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
JMSF046K18+ TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
JMFN033F16+ TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
rJMSF029G17- TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
JMFN019M23+ GATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
JMSF040A04+ TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
JMSF029G17+ TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
rJMSF040A04- TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
                      ____________________________________________________________
consensus TAGATGCAGGTGTTGGCACTTCTGGATTTGACTGTGACTTCCTGAGTTGTGGTTATTGAG
 
. : . : . : . : . : . :
rJMSF046K18- GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
JMSF046K18+ GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
JMFN033F16+ GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
rJMSF029G17- GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
JMFN019M23+ GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
JMSF040A04+ GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
JMSF029G17+ GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
rJMSF040A04- GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
                      ____________________________________________________________
consensus GCAGGAACACTGCAGGCTGAGGATGAGGAGTGCAGCAGGCTTGCCCGGCATGAATTCCCG
 
. : . : . : . : . : . :
rJMSF046K18- ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
JMSF046K18+ ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
JMFN033F16+ ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
rJMSF029G17- ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
JMFN019M23+ ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
JMSF040A04+ ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
JMSF029G17+ ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
rJMSF040A04- ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
                      ____________________________________________________________
consensus ATTTCGTTCTCTCTGGCGCACTCGATCCCATCCACTGAAGGTATCACCAACCTGTAAATA
 
. : . : . : . : . : . :
rJMSF046K18- CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
JMSF046K18+ CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
JMFN033F16+ CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
rJMSF029G17- CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
JMFN019M23+ CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
JMSF040A04+ CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
JMSF029G17+ CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
rJMSF040A04- CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
                      ____________________________________________________________
consensus CCAAACCTGTTTGTAGTCCTGTTCACTGAGAATTCTATTTGCTCTGCTGTTTTTGGTGAA
 
. : . : . : . : . : . :
rJMSF046K18- CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
JMSF046K18+ CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
JMFN033F16+ CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
rJMSF029G17- CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
JMFN019M23+ CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
JMSF040A04+ CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
JMSF029G17+ CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
rJMSF040A04- CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
                      ____________________________________________________________
consensus CTTGCTTTGAATGTGCAGTCGATTTTCACTTCCACACCTGGCATGAAGTAGCTGTGCCTG
 
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rJMSF046K18- GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
JMSF046K18+ GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
JMFN033F16+ GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
rJMSF029G17- GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
JMFN019M23+ GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
JMSF040A04+ GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
JMSF029G17+ GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
rJMSF040A04- GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
                      ____________________________________________________________
consensus GAGAAGGAATTATTGGAGCAGATGTCACAGTAAACCATTCCCATGACAGTGATCTGGGGA
 
. : . : . : . : . : . :
rJMSF046K18- TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
JMSF046K18+ TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
JMFN033F16+ TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
rJMSF029G17- TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
JMFN019M23+ TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
JMSF040A04+ TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
JMSF029G17+ TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
rJMSF040A04- TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
                      ____________________________________________________________
consensus TCAGGGATATGGGCTAGTCTTGGACCTCTTGGTGGTGGTGCCACAACATGAAGAGGGAGT
 
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rJMSF046K18- GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAG
JMSF046K18+ GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAG
JMFN033F16+ GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
rJMSF029G17- GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
JMFN019M23+ GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
JMSF040A04+ GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
JMSF029G17+ GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
rJMSF040A04- GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
                      ____________________________________________________________
consensus GAGGACAGAGTGAAGAAGAAGAAGAAGAAGAAGAAGCAGCAAAAAAACAAGAAAACAGGA
 
. : . : . : . : . : . :
JMFN033F16+ GGAGGTGAA
rJMSF029G17- GGAGGTGAAGTCATTGCAGAAAAACTCCAAGAAGAGTGAGTTTGAGTTTGAGTTTTGGTT
JMFN019M23+ GGAGGTGAAGTCATTGCAGAAAAACTCCAAGAAGAGTGAGTTTGAGTTTGAGTTTTGGTT
JMSF040A04+ GGAGGTGAAGTCATTGCAGAAAAACTCCAAGAAGAGTGAGTTTGAGTTTGAGTTTTGGTT
JMSF029G17+ GGAGGTGAAGTCATTGCAGAAAAACTCCAAGAAGAGTGAGTTTGAGTTTGAGTTTTGGTT
rJMSF040A04- GGAGGTGAAGTCATTGCAGAAAAACTCCAAGAAGAGTGAGTTTGAGTTTGAGTTTTGGTT
                      ____________________________________________________________
consensus GGAGGTGAAGTCATTGCAGAAAAACTCCAAGAAGAGTGAGTTTGAGTTTGAGTTTTGGTT
 
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rJMSF029G17- TGAGGCTAGG
JMFN019M23+ TGAGGCTAGGAAAGGATGGAGTGGGTAAGATTGTAGTGTGGCTGAGAAGCAAGGCAAAGT
JMSF040A04+ TGAGGCTAGGAAAGGATGGAGTGGGTAAGATTGTAGTGTGGCTGAGAAGCAAGGCAAAGT
JMSF029G17+ TGAGGCTAGGAAAGGATGGAGTGGGTAAGATTGTAGTGTGGCTGAGAAGCAAGGCAAAGT
rJMSF040A04- TGAGGCTAGGAAAGGATGGAGTGGGTAAGATTGTAGTGTGGCTGANAAGCAAGGCAAAGT
                      ____________________________________________________________
consensus TGAGGCTAGGAAAGGATGGAGTGGGTAAGATTGTAGTGTGGCTGAGAAGCAAGGCAAAGT
 
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JMFN019M23+ GTGAGTATAGGGATAATGGTGAAAGAATGCCAACTGGGTAAAAG
JMSF040A04+ GTGAGTATAGGGATAATGGTGAAAGAATGCCAACTGGGTAAAAGTGAGGCACCTGCACTC
JMSF029G17+ GTGAGTAT
rJMSF040A04- GTGAGTATAGGGATAATGGTGAAAGAATGCCAACTGGGTAAAAGTGAGGCACCTGCACTC
                      ____________________________________________________________
consensus GTGAGTATAGGGATAATGGTGAAAGAATGCCAACTGGGTAAAAGTGAGGCACCTGCACTC