Contig 008608:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF039M05-                                   GGTGGAGTTGAGGGTTAGAGATTTCGCCTTTTGAGG
                      ____________________________________________________________
consensus                                     GGTGGAGTTGAGGGTTAGAGATTTCGCCTTTTGAGG
 
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JMSF039M05-           GTGAGAATAAGCTTTTCCTGGCTATAGATATCCTAGTAGAAGCTGTGTGCATGCATAGAA
                      ____________________________________________________________
consensus             GTGAGAATAAGCTTTTCCTGGCTATAGATATCCTAGTAGAAGCTGTGTGCATGCATAGAA
 
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JMSF039M05-           CCAGGGTGTGAGGTTCGGAGGTCAGGGATTTCATCTTTAATTTTGAGGGTGAGAATAAGC
                      ____________________________________________________________
consensus             CCAGGGTGTGAGGTTCGGAGGTCAGGGATTTCATCTTTAATTTTGAGGGTGAGAATAAGC
 
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JMSF039M05-           TTTTCTTGATTATAAATATGAAGCTATGTGAACCAGGGTGTGAGGTTCGGGGATCAGGGA
                      ____________________________________________________________
consensus             TTTTCTTGATTATAAATATGAAGCTATGTGAACCAGGGTGTGAGGTTCGGGGATCAGGGA
 
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JMSF039M05-           TTTCACCTTTTGAAGTTGAGAATAAGATTTTCTTGGCTTAAATACCCTAGGAGAAGCTGT
                      ____________________________________________________________
consensus             TTTCACCTTTTGAAGTTGAGAATAAGATTTTCTTGGCTTAAATACCCTAGGAGAAGCTGT
 
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JMSF039M05-           GTGGCAACCACACTCTTATTCATCTACTCCTTTAATAATTTAGCTTTATTTAATTCATCT
                      ____________________________________________________________
consensus             GTGGCAACCACACTCTTATTCATCTACTCCTTTAATAATTTAGCTTTATTTAATTCATCT
 
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JMSF039M05-           TCTGAAGGGGAAAATAAGCTTTTCTTGGCTATAAATACCCTAGGAGAAGCTGTGTGGCAG
                      ____________________________________________________________
consensus             TCTGAAGGGGAAAATAAGCTTTTCTTGGCTATAAATACCCTAGGAGAAGCTGTGTGGCAG
 
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JMSF039M05-           CCACACTCTCATTCATCTACTCCTTTAATAATTTAGCTTTATTTAATTCATTTTCTTCAT
JMSF045H02-             ACACTCTCATTCATCTACTCCTTTAATAATTTAGCTTTATTTAATTCATTTTCTTCAT
                      ____________________________________________________________
consensus             CCACACTCTCATTCATCTACTCCTTTAATAATTTAGCTTTATTTAATTCATTTTCTTCAT
 
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JMSF039M05-           ATACACAATTAAGCTAGCTTGTTCTTGTTCTTGTTCTTGTTGTTCCATGGCGGCTTCTAA
JMSF045H02-           ATACACAATTAAGCTAGCTTGTTCTTGTTCTTGTTCTTGTTGTTCCATGGCGGCTTCTAA
                      ____________________________________________________________
consensus             ATACACAATTAAGCTAGCTTGTTCTTGTTCTTGTTCTTGTTGTTCCATGGCGGCTTCTAA
 
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JMSF039M05-           CCATGCATTCCAGCAAGAACCCAAGCATGTTGTCCCTAACAATGGCGACGACATGGAGCA
JMSF045H02-           CCATGCATTCCAGCAAGAACCCAAGCATGTTGTCCCTAACAATGGCGACGACATGGAGCA
rJMSF045H02+                                                           GACATGGAGCA
rJMSF039M05+                             CCCAAGCATGTTGTCCCTAACAATGGCGACGACATGGAGCA
                      ____________________________________________________________
consensus             CCATGCATTCCAGCAAGAACCCAAGCATGTTGTCCCTAACAATGGCGACGACATGGAGCA
 
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JMSF039M05-           ACAAGCGAGATCCCTGGATGAAGAGG                                  
JMSF045H02-           ACAAGCGAGATCCCTGGATGAAGAGGATAAGAAAGGGGGATTTGATTACGCGAAGCGGGC
rJMSF045H02+          ACCAGCGAGATCCCTGGATGAAGAGGATAAGAAAGGGGGATTTGATTACGCGAAGCGGGC
rJMSF039M05+          ACAAGCGAGATCCCTGGATGAAGAGGATAAGAAAGGGGGATTTGATTACGCGAAGCGGGC
                      ____________________________________________________________
consensus             ACAAGCGAGATCCCTGGATGAAGAGGATAAGAAAGGGGGATTTGATTACGCGAAGCGGGC
 
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JMSF045H02-           GCCGTGGCTGCGCGCGGCGGTTCTGGGAGCCAACGATGGATTGGTTTCCATAGCTTCTTT
rJMSF045H02+          GCCGTGGCTGCGCGCGGCGGTTCTGGGAGCCAACGATGGATTGGTTTCCATAGCTTCTTT
rJMSF039M05+          GCCGTGGCTGCGCGCGGCGGTTCTGGGAGCCAACGATGGATTGGTTTCCATAGCTTCTTT
                      ____________________________________________________________
consensus             GCCGTGGCTGCGCGCGGCGGTTCTGGGAGCCAACGATGGATTGGTTTCCATAGCTTCTTT
 
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JMSF045H02-           GATGATGGGTGTTGGGACGGTGAAGCAGGACATCAAGGCCATGATCCTGACCGGGTTTGC
rJMSF045H02+          GATGATGGGTGTTGGGACGGTGAAGCAGGACATCAAGGCCATGATCCTGACCGGGTTTGC
rJMSF039M05+          GATGATGGGTGTTGGGACGGTGAAGCAGGACATCAAGGCCATGATCCTGACCGGGTTTGC
                      ____________________________________________________________
consensus             GATGATGGGTGTTGGGACGGTGAAGCAGGACATCAAGGCCATGATCCTGACCGGGTTTGC
 
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JMSF045H02-           CGGCATGGTGGCCGGCGCGTGCTCCATGGCCATCGGAGAGTTCGTCTCCGTATATTCACA
rJMSF045H02+          CGGCATGGTGGCCGGCGCGTGCTCCATGGCCATCGGAGAGTTCGTCTCCGTATATTCACA
rJMSF039M05+          CGGCATGGTGGCCGGCGCGTGCTCCATGGCCATCGGAGAGTTCGTCTCCGTATATTCACA
                      ____________________________________________________________
consensus             CGGCATGGTGGCCGGCGCGTGCTCCATGGCCATCGGAGAGTTCGTCTCCGTATATTCACA
 
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JMSF045H02-           GCGCGACATAGAGGTTGCGCAGATGAAGAGGAAGAAGAACAGGCGCAACGGGGAGGACGC
rJMSF045H02+          GCGCGACATAGAGGTTGCGCAGATGAAGAGGAAGAAGAACAGGCGCAACGGGGAGGACGC
rJMSF039M05+          GCGCGACATAGAGGTTGCGCAGATGAAGAGGAAGAAGAACAGGCGCAACGGGGAGGACGC
                      ____________________________________________________________
consensus             GCGCGACATAGAGGTTGCGCAGATGAAGAGGAAGAAGAACAGGCGCAACGGGGAGGACGC
 
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JMSF045H02-           CGGGGAAGAAGAAGAGGAAGAGAGTGACGTCGACGAGTTGCCGAATCCCATGCAGGCGGC
rJMSF045H02+          CGGGGAAGAAGAAGAGGAAGAGAGTGACGTCGACGAGTTGCCGAATCCCATGCAGGCGGC
rJMSF039M05+          CGGGGAAGAAGAAGAGGAAGAGAGTGACGTCGACGAGTTGCCGAATCCCATGCAGGCGGC
                      ____________________________________________________________
consensus             CGGGGAAGAAGAAGAGGAAGAGAGTGACGTCGACGAGTTGCCGAATCCCATGCAGGCGGC
 
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JMSF045H02-           GGCGGCATCGGTGGTTGCTTTCACAATGGGCGCAATGGTGCCCTTGCTGGCGGCGTCGTT
rJMSF045H02+          GGCGGCATCGGTGGTTGCTTTCACAATGGGCGCAATGGTGCCCTTGCTGGCGGCGTCGTT
rJMSF039M05+          GGCGGCATCGGTGGTTGCTTTCACAATGGGCGCAATGGTGCCCTTGCTGGCGGCGTCGTT
                      ____________________________________________________________
consensus             GGCGGCATCGGTGGTTGCTTTCACAATGGGCGCAATGGTGCCCTTGCTGGCGGCGTCGTT
 
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JMSF045H02-           CATAAAGCCTTACAAGGTGAGGATTGGGGCGGTGATTGCGGCCGTCACCGTCGCTCTGGT
rJMSF045H02+          CATAAAGCCTTACAAGGTGAGGATTGGGGCGGTGATTGCGGCCGTCACCGTCGCTCTGGT
rJMSF039M05+          CATAAAGCCTTACAAGGTGAGGATTGGGGCGGTGATTGCGGCCGTCACCGTCGCTCTGGT
                      ____________________________________________________________
consensus             CATAAAGCCTTACAAGGTGAGGATTGGGGCGGTGATTGCGGCCGTCACCGTCGCTCTGGT
 
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JMSF045H02-           GGTTTGTGGGTGGCTTGGGGCGGCATTAGGCGGTGCACCTAAGGGTAAAGCCTCAGTTAN
rJMSF045H02+          GGTTTGTGGGTGGCTTGGGGCGGCATTAGGCGGTGCACCTAAGGGTAAAGCCTCAGTTAG
rJMSF039M05+          GGTTTGTGGGTGGCTTGGGGCGGCATTAGGCGGTGCACCTAAGGGTAAAGCCTCAGTTAG
                      ____________________________________________________________
consensus             GGTTTGTGGGTGGCTTGGGGCGGCATTAGGCGGTGCACCTAAGGGTAAAGCCTCAGTTAG
 
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JMSF045H02-           GGTTTTGAT                                                   
rJMSF045H02+          GGTTTTGATTGGCGGGTGGCTTGCCATGGCTATAACATCTGGATTAACAAAGTTGATTGG
rJMSF039M05+          GGTTTTGATTGGCGGGTGGCTTGCCATGGCTATAACATCTGGATTAACAAAGTTGATTGG
                      ____________________________________________________________
consensus             GGTTTTGATTGGCGGGTGGCTTGCCATGGCTATAACATCTGGATTAACAAAGTTGATTGG
 
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rJMSF045H02+          TATAAAAAGCTAATTAAGCAAATAAAAATAATCCATCAACTTAACGTACATATATATAGC
rJMSF039M05+          TATAAAAAGCTAATTAAGCAAATAAAAATAATCCATCAACTTAACGTACATATATATAGC
                      ____________________________________________________________
consensus             TATAAAAAGCTAATTAAGCAAATAAAAATAATCCATCAACTTAACGTACATATATATAGC
 
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rJMSF045H02+          TTGTATATTTCTCCTGTATTCTCATCCATTTCTTTACAGTTTACATGGTAAGAGATCAGA
rJMSF039M05+          TTGTATATTTCTCCTGTATTCTCATCCATTTCTTTACAGTTTACATGGTAAGAGATCAGA
                      ____________________________________________________________
consensus             TTGTATATTTCTCCTGTATTCTCATCCATTTCTTTACAGTTTACATGGTAAGAGATCAGA
 
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rJMSF045H02+          CAAATCAGCCAAGGATGACGTAGGTTTAATGATCAAATATAGCAGACTAATAATGTCATA
rJMSF039M05+          CAAATCAGCCAAGGATGACGTAGGTTTAATGATCAAATATAGCAGACTAATAATGTCATA
                      ____________________________________________________________
consensus             CAAATCAGCCAAGGATGACGTAGGTTTAATGATCAAATATAGCAGACTAATAATGTCATA
 
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rJMSF045H02+          TATGTATGGCACCTCAATCCATATGTGTAATATA                          
rJMSF039M05+          TATGTATGGCACCTCAATCCATATGTGTAATATATATAATGCATGTTTTTTCATCTCATG
                      ____________________________________________________________
consensus             TATGTATGGCACCTCAATCCATATGTGTAATATATATAATGCATGTTTTTTCATCTCATG