| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027E15 | Sequence | 555 | 009481 (5) | ref|XP_011073024.1| | 5e-61 | PREDICTED: uncharacterized protein LOC105158090 isoform X1 [Sesamum indicum] | 710 | 008604 (4) | ref|XP_009595703.1| | 7e-42 | PREDICTED: uncharacterized protein LOC104091946 isoform X3 [Nicotiana tomentosi |
| JMSF029P02 | Sequence | 784 | 008604 (4) | ref|XP_009595703.1| | 9e-42 | PREDICTED: uncharacterized protein LOC104091946 isoform X3 [Nicotiana tomentosi | |||||
| JMSF030M13 | Sequence | 648 | 009481 (5) | ref|XP_011073026.1| | 1e-90 | PREDICTED: uncharacterized protein LOC105158090 isoform X2 [Sesamum indicum] | 733 | 008604 (4) | ref|XP_011073027.1| | 2e-46 | PREDICTED: uncharacterized protein LOC105158090 isoform X3 [Sesamum indicum] |
| JMSF038N05 | Sequence | 678 | 009481 (5) | ref|XP_011073026.1| | 5e-81 | PREDICTED: uncharacterized protein LOC105158090 isoform X2 [Sesamum indicum] | 912 | 008604 (4) | ref|XP_011073027.1| | 3e-42 | PREDICTED: uncharacterized protein LOC105158090 isoform X3 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF030M13+ AAAGATACATCTGATGAAGA
____________________________________________________________
consensus AAAGATACATCTGATGAAGA
. : . : . : . : . : . :
rJMSF030M13+ AACTACNAGCTCTAGCTTGNTGCAAGATTGTTCTAACAATGACCTTCCATCAGATGACTT
rJMSF038N05+ ATCAGATGACTT
____________________________________________________________
consensus AACTACNAGCTCTAGCTTGNTGCAAGATTGTTCTAACAATGACCTTCCATCAGATGACTT
. : . : . : . : . : . :
rJMSF030M13+ TTGGAAACCATTTGTAACATCATCAACCATTCATCCATCAGAAGAAAATGGTGATGGTGC
rJMSF029P02+ CCATTNGTAACATCATCAACCATTCATCCATCAGAAGAAAATGGTGATGGTGC
rJMSF038N05+ TNGGAAACCATTNGTAACATCATCAACCATTCATCCATCAGAAGAAAATGGTGATGGTGC
____________________________________________________________
consensus TTGGAAACCATTTGTAACATCATCAACCATTCATCCATCAGAAGAAAATGGTGATGGTGC
. : . : . : . : . : . :
rJMSF030M13+ CCTTCTCCAAGAACAACTACATGATAGCTCTGTTAAAGGAAATAATAAACTTTTTTCTGA
rJMSF029P02+ CCTTCTCCAAGAACAACTACATGATAGCTCTGTTAAAGGAAATAATAAACTTTTTTCTGA
rJMSF038N05+ CCTTCTCCAAGAACAACTACATGATAGCTCTGTTAAAGGAAATAATAAACTTTTTTCTGA
____________________________________________________________
consensus CCTTCTCCAAGAACAACTACATGATAGCTCTGTTAAAGGAAATAATAAACTTTTTTCTGA
. : . : . : . : . : . :
rJMSF030M13+ CTTGTCAAAATCTAAATTGAAATCTTCGAAGTCCATGACAAGGAACAAGTGGAAACCTGA
rJMSF029P02+ CTTGTCAAAATCTAAATTGAAATCTTCGAAGTCCATGACAAGGAACAAGTGGAAACCTGA
rJMFF027E15+ TTGTCAAAATCTAAATTGAAATCTTCGAAGTCCATGACAAGGAACAAGTGGAAACCTGA
rJMSF038N05+ CTTGTCAAAATCTAAATTGAAATCTTCGAAGTCCATGACAAGGAACAAGTGGAAACCTGA
____________________________________________________________
consensus CTTGTCAAAATCTAAATTGAAATCTTCGAAGTCCATGACAAGGAACAAGTGGAAACCTGA
. : . : . : . : . : . :
rJMSF030M13+ AGAGGTTAAGAAGTTGATTAAAATGCGTGGTGAACTCAATAGCAAATTCCAAGTTCTCAA
rJMSF029P02+ AGAGGTTAAGAAGTTGATTAAAATGCGTGGTGAACTCAATAGCAAATTCCAAGTTCTCAA
rJMFF027E15+ AGAGGTTAAGAAGTTGATTAAAATGCGTGGTGAACTCAATAGCAAATTCCAAGTTCTCAA
rJMSF038N05+ AGAGGTTAAGAAGTTGATTAAAATGCGTGGTGAACTCAATAGCAAATTCCAAGTTCTCAA
____________________________________________________________
consensus AGAGGTTAAGAAGTTGATTAAAATGCGTGGTGAACTCAATAGCAAATTCCAAGTTCTCAA
. : . : . : . : . : . :
rJMSF030M13+ GGGGCGAATGGCTCTCTGGCAAGAGATATCTTCGAATTTACTATCTGACGGAATCAGTCG
rJMSF029P02+ GGGGCGAATGGCTCTCTGGCAAGAGATATCTTCGAATTTACTATCTGACGGAATCAGTCG
rJMFF027E15+ GGGGCGAATGGCTCTCTGGCAAGAGATATCTTCGAATTTACTATCTGACGGAATCAGTCG
rJMSF038N05+ GGGGCGAATGGCTCTCTGGCAAGAGATATCTTCGAATTTACTATCTGACGGAATCAGTCG
____________________________________________________________
consensus GGGGCGAATGGCTCTCTGGCAAGAGATATCTTCGAATTTACTATCTGACGGAATCAGTCG
. : . : . : . : . : . :
rJMSF030M13+ AAGTCCTGGGCAATGCAAATCTCTGTGGGCATCTCTTGTTCAAAAATACGAGGAAAGTAA
rJMSF029P02+ AAGTCCTGGGCAATGCAAATCTCTGTGGGCATCTCTTGTTCAAAAATACGAGGAAAGTAA
rJMFF027E15+ AAGTCCTGGGCAATGCAAATCTCTGTGGGCATCTCTTGTTCAAAAATACGAGGAAAGTAA
rJMSF038N05+ AAGTCCTGGGCAATGCAAATCTCTGTGGGCATCTCTTGTTCAAAAATACGAGGAAAGTAA
____________________________________________________________
consensus AAGTCCTGGGCAATGCAAATCTCTGTGGGCATCTCTTGTTCAAAAATACGAGGAAAGTAA
. : . : . : . : . : . :
rJMSF030M13+ GAAGGATAGAAAGAGCCAGGAAAAGTGGCCTTATTTTAAGGATATGAATAGTATTTTGTC
rJMSF029P02+ GAAGGATAGAAAGAGCCAGGAAAAGTGGCCTTATTTTAAGGATATGAATAGTATTTTGTC
rJMFF027E15+ GAAGGATAGAAAGAGCCAGGAAAAGTGGCCTTATTTTAAGGATATGAATAGTATTTTGTC
rJMSF038N05+ GAAGGATAGAAAGAGCCAGGAAAAGTGGCCTTATTTTAAGGATATGAATAGTATTTTGTC
____________________________________________________________
consensus GAAGGATAGAAAGAGCCAGGAAAAGTGGCCTTATTTTAAGGATATGAATAGTATTTTGTC
. : . : . : . : . : . :
rJMSF030M13+ AGATTTGGAGGCACCGACATCAAAATGATAAGGAAATGTTGGTAGAGCTGTGAAATTTTT
rJMSF029P02+ AGATTTGGAGGCACCGACATCAAAATGATAAGGAAATGTTGGTAGAGCTGTGAAATTTTT
rJMFF027E15+ AGATTTGGAGGCACCGACATCAAAATGATAAGGAAATGTTGGTAGAGCTGTGAAATTTTT
rJMSF038N05+ AGATTTGGAGGCACCGACATCAAAATGATAAGGAAATGTTGGTAGAGCTGTGAAATTTTT
____________________________________________________________
consensus AGATTTGGAGGCACCGACATCAAAATGATAAGGAAATGTTGGTAGAGCTGTGAAATTTTT
. : . : . : . : . : . :
rJMSF030M13+ GGTGTAGTGCTAGACAAAAATCATGTAAAGGTAAAGGATAGTCCTGACCAGTGTGTTGGC
rJMSF029P02+ GGTGTAGTGCTAGACAAAAATCATGTAAAGGTAAAGGATAGTCCTGACCAGTGTGTTGGC
rJMFF027E15+ GGTGTAGTGCTAGACAAAAATCATGTAAAGGTAAAGGATAGTCCTGACCAGTGTGTTGGC
rJMSF038N05+ GGTGTAGTGCTAGACAAAAATCGTGTAAAGGTAAAGGATAGTCCTGACCAGTGTGTTGGC
____________________________________________________________
consensus GGTGTAGTGCTAGACAAAAATCATGTAAAGGTAAAGGATAGTCCTGACCAGTGTGTTGGC
. : . : . : . : . : . :
rJMSF030M13+ ATGCGATATCTCTCTGCCAACTAGGTCGTGATTTTACATGCTGCAGCCGAACTGTTACTG
rJMSF029P02+ ATGCGATATCTCTCTGCCAACTAGGTCGTGATTTTACATGCTGCAGCCGAACTGTTACTG
rJMFF027E15+ ATGCGATATCTCTCTGCCAACTAGGTCGTGATTTTACATGCTGCAGCCGAACTGTTACTG
rJMSF038N05+ ATGCGATATCTCTCTGCCAACTGGGTCGTGATTTTACATGCTGCAGCCGAACTGTTACTG
____________________________________________________________
consensus ATGCGATATCTCTCTGCCAACTAGGTCGTGATTTTACATGCTGCAGCCGAACTGTTACTG
. : . : . : . : . : . :
rJMSF030M13+ ATGTGGTGATATGATGGATTCCACTCGGTGGAGTGATTAGCTTTAGCTATCAT
rJMSF029P02+ ATGTGGTGATATGATGGATTCCACTCGGTGGAGTGATTAGCTTTAGCTATCATTCTAAAA
rJMFF027E15+ ATGTGGTGATATGATGGATTCCACTCGGTGGAGTGATTAGCTTTAGCTATCATTCTAAAA
rJMSF038N05+ ATGTGGTGATATGATGGATTCCACTCGGTGGAGTGATTAGCTTTAGCTATCATTCTAAAA
____________________________________________________________
consensus ATGTGGTGATATGATGGATTCCACTCGGTGGAGTGATTAGCTTTAGCTATCATTCTAAAA
. : . : . : . : . : . :
rJMSF029P02+ ACAAAAAGACAAATGATCACAAACTCGTGTTATCATGCAATTCTTAGTTTTTTTACCCAG
rJMFF027E15+ ACAAAAAGACAAATGATCACAAACTCGTGTTATCATGCAATTCTTAGTTTTTTTACCCAG
rJMSF038N05+ ACAAAAAGACAAATGATCACAAACTCGTGTTATCATGCAATTCTTAGTTTTTTTACCCAG
____________________________________________________________
consensus ACAAAAAGACAAATGATCACAAACTCGTGTTATCATGCAATTCTTAGTTTTTTTACCCAG
. : . : . : . : . : . :
rJMSF029P02+ AACCATTTTAGTAACCATTGATTGCCCAGTACAAGTTAACAAAAAACTATGGGAACAATA
rJMFF027E15+ AACCATTTTAGTAACCATTGATTGCCCAGTACAAGTTAACAAAAAACTATGGGAACAATA
rJMSF038N05+ AACCATTTTAGTAACCATTGATTGCCCAGTACAAGTTAACAAAAAACTATGGGAACAATA
____________________________________________________________
consensus AACCATTTTAGTAACCATTGATTGCCCAGTACAAGTTAACAAAAAACTATGGGAACAATA
. : . : . : . : . : . :
rJMSF029P02+ GATGTAGATAT
rJMFF027E15+ GATGTAGATATGTAATTGTTGTCAATTTTGGAGCATTATGGTGATCAGGT
rJMSF038N05+ GATGTAGATATGTAATTGTTGTCAATTTTGGAGCATTATGGTGATCAGGTTGACCCCACA
____________________________________________________________
consensus GATGTAGATATGTAATTGTTGTCAATTTTGGAGCATTATGGTGATCAGGTTGACCCCACA
. : . : . : . : . : . :
rJMSF038N05+ AGCTGTAATATTTATTTTTGCAGTAGTCAGTTGTAATGTTGGCGGAGGAAGGCATTATTA
____________________________________________________________
consensus AGCTGTAATATTTATTTTTGCAGTAGTCAGTTGTAATGTTGGCGGAGGAAGGCATTATTA