| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN020E01 | Sequence | 589 | 008596 (8) | gb|EYU39671.1| | 2e-30 | hypothetical protein MIMGU_mgv1a003896mg [Erythranthe guttata] | |||||
| JMFN020O12 | Sequence | 624 | 008596 (8) | ref|XP_004250028.1| | 6e-62 | PREDICTED: NAC domain-containing protein 78 [Solanum lycopersicum] | |||||
| JMSF015E13 | Sequence | 521 | 005268 (7) | gb|AAM34772.1|AF509872_1 | 2e-86 | nam-like protein 9 [Petunia x hybrida] | 750 | 008596 (8) | ref|XP_009764398.1| | 4e-44 | PREDICTED: NAC domain-containing protein 78-like [Nicotiana sylvestris] |
| JMSF018I01 | Sequence | 456 | 005268 (7) | gb|AAM34772.1|AF509872_1 | 7e-19 | nam-like protein 9 [Petunia x hybrida] | 748 | 008596 (8) | ref|XP_009599412.1| | 3e-51 | PREDICTED: NAC domain-containing protein 78-like [Nicotiana tomentosiformis] |
| JMSF028I02 | Sequence | 624 | 005268 (7) | gb|AAM34772.1|AF509872_1 | 4e-97 | nam-like protein 9 [Petunia x hybrida] | 688 | 008596 (8) | ref|XP_009764398.1| | 1e-40 | PREDICTED: NAC domain-containing protein 78-like [Nicotiana sylvestris] |
| JMSF037E11 | Sequence | 636 | 005268 (7) | gb|AAM34772.1|AF509872_1 | 3e-86 | nam-like protein 9 [Petunia x hybrida] | 770 | 008596 (8) | ref|XP_009764398.1| | 1e-44 | PREDICTED: NAC domain-containing protein 78-like [Nicotiana sylvestris] |
| JMSF041A10 | Sequence | 740 | 005268 (7) | gb|AAM34772.1|AF509872_1 | 2e-122 | nam-like protein 9 [Petunia x hybrida] | 782 | 008596 (8) | ref|XP_009764398.1| | 1e-52 | PREDICTED: NAC domain-containing protein 78-like [Nicotiana sylvestris] |
| JMSF044N18 | Sequence | 691 | 005268 (7) | gb|AAM34772.1|AF509872_1 | 1e-113 | nam-like protein 9 [Petunia x hybrida] | 699 | 008596 (8) | ref|XP_009764398.1| | 6e-39 | PREDICTED: NAC domain-containing protein 78-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFN020O12- CCTTGCGGACAGCAACATCCTGATGAGCTGAAGC
____________________________________________________________
consensus CCTTGCGGACAGCAACATCCTGATGAGCTGAAGC
. : . : . : . : . : . :
JMFN020O12- CCTTTGATCAACCAATTCATGATTTTGATCCCAAGCCTGTCAAACGAGAGTACATGGGCG
____________________________________________________________
consensus CCTTTGATCAACCAATTCATGATTTTGATCCCAAGCCTGTCAAACGAGAGTACATGGGCG
. : . : . : . : . : . :
JMFN020O12- AGTCTAGCAATAGCATGACCTCTGAAAGTTTGAATTGCTTACTCAATGAACCACTCATGG
____________________________________________________________
consensus AGTCTAGCAATAGCATGACCTCTGAAAGTTTGAATTGCTTACTCAATGAACCACTCATGG
. : . : . : . : . : . :
JMFN020O12- ACACTACCGACAGATTTCAGTTCAATGATGGAACATTTCTTGAAACTAATGATCTTTCAA
____________________________________________________________
consensus ACACTACCGACAGATTTCAGTTCAATGATGGAACATTTCTTGAAACTAATGATCTTTCAA
. : . : . : . : . : . :
JMFN020O12- ATCCTGTCGAAGGAAATACCTCAGGCTTCGACATGTTTGACTTCC-TTAATTTCTATGAT
rJMSF041A10+ AATACNTCAGGCTTCGACATGTTTGACTTCCNTAAATTTCTATGAT
rJMSF018I01+ TATGAT
____________________________________________________________
consensus ATCCTGTCGAAGGAAATACCTCAGGCTTCGACATGTTTGACTTCCNTTAATTTCTATGAT
. : . : . : . : . : . :
JMFN020O12- GCCAAGGATGATTTCCAAGACATGCTGTTTGATTCTGATATATTTATTGGAAATGATGAG
rJMSF041A10+ GCCANGGATGATTTCCAAGACATGCTGTTTGATTCTGATATATTTATTGGAAATGATGAG
rJMSF018I01+ GCCAAGGATGATTTCCAAGACATGCTGTTTGATTCTGATATATTTATTGGAAATGACGAG
____________________________________________________________
consensus GCCAAGGATGATTTCCAAGACATGCTGTTTGATTCTGATATATTTATTGGAAATGATGAG
. : . : . : . : . : . :
JMFN020O12- TTTCTTGGAGAACAATCACCTTCTGCTGATAAGGATGCATGCGACACAACTGAACAGGCT
rJMSF041A10+ TTTCTTGGAGAACAATCACCTTCTGCTGATAAGGATGCATGCGACACAACTGAACAGGCT
rJMSF018I01+ TTTCTTGGAGAACAATCACCTTCTGCTGATAAGGATGCATGCGACACAACTGAACAGGCT
rJMSF015E13+ CTGATAAGGATGCATGCGACACAACTGAACAGGCT
rJMSF037E11+ AGAACAATCACCTTCTGCTGATAAGGATGCATGCGACACAACTGAACAGGCT
____________________________________________________________
consensus TTTCTTGGAGAACAATCACCTTCTGCTGATAAGGATGCATGCGACACAACTGAACAGGCT
. : . : . : . : . : . :
JMFN020O12- GTTTTGCCCAACGAAAAGGCCGTTGATACTGAACATAAGAATGATATT-GCATCATCGTC
rJMSF041A10+ GTTTTGCCCAACGAAAAGGCCGTTGATACTGAACATAAGAATGATATT-GCATCATCGTC
rJMSF018I01+ GTTTTGCCCAACGAAAAGGCCGTTGATACTGAACATAAGAATGATATT-GCATCATCGTC
rJMSF015E13+ GTTTTGCCCAACGAAAAGGCCGTTGATACTGAACATAAGAATGATATT-GCATCATCGTC
rJMSF028I02+ CTGAACATAAGAATGATATT-GCATCATCGTC
rJMSF044N18+ CCGTTGATACTGAACATAAGAATGATATTNGCATCATCGTC
rJMSF037E11+ GTTTTGCCCAACGAAAAGGCCGTTGATACTGAACATAAGAATGATATT-GCATCATCGTC
____________________________________________________________
consensus GTTTTGCCCAACGAAAAGGCCGTTGATACTGAACATAAGAATGATATT-GCATCATCGTC
. : . : . : . : . : . :
JMFN020O12- AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
rJMSF041A10+ AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
rJMSF018I01+ AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
JMFN020E01- GCCAG
rJMSF015E13+ AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
rJMSF028I02+ AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
rJMSF044N18+ AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
rJMSF037E11+ AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
____________________________________________________________
consensus AAAGCCAGAGCCCACCAAATTGGGGTCAGACTTCCAACATCCATTTATCAAGCAGGCCAG
. : . : . : . : . : . :
JMFN020O12- CCAAATGTTGGGCAACATACCCGCTTCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
rJMSF041A10+ CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
rJMSF018I01+ CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
JMFN020E01- CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
rJMSF015E13+ CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
rJMSF028I02+ CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
rJMSF044N18+ CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
rJMSF037E11+ CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
____________________________________________________________
consensus CCAAATGTTGGGCAACATACCCGCTCCTCCAGCATTTGCATCAGAGATCCCAAAAGATGC
. : . : . : . : . : . :
JMFN020O12- AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACT
rJMSF041A10+ AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
rJMSF018I01+ AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
JMFN020E01- AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
rJMSF015E13+ AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
rJMSF028I02+ AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
rJMSF044N18+ AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
rJMSF037E11+ AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
____________________________________________________________
consensus AGCTCTGCGCCTCAATGCAGCAACCCAAGCATCAAGCTCAGTGCACGTTACTGCTGGTCT
. : . : . : . : . : . :
rJMSF041A10+ GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
rJMSF018I01+ GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACACCATCATCCTTTC
JMFN020E01- GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
rJMSF015E13+ GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
rJMSF028I02+ GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
rJMSF044N18+ GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
rJMSF037E11+ GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
____________________________________________________________
consensus GATTCAAATCAGCGACCTGACTCTCGGCAGCAAGCATGGCAATTACAACATCATCCTTTC
. : . : . : . : . : . :
rJMSF041A10+ TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
rJMSF018I01+ TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
JMFN020E01- TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
rJMSF015E13+ TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
rJMSF028I02+ TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
rJMSF044N18+ TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
rJMSF037E11+ TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
____________________________________________________________
consensus TTTCGACTTCTCACAAGGTGCACAAAGTCCAGGCAGCTTGGAACCAGTGAGCCACGGGAA
. : . : . : . : . : . :
rJMSF041A10+ GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
rJMSF018I01+ GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
JMFN020E01- GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
rJMSF015E13+ GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
rJMSF028I02+ GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
rJMSF044N18+ GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
rJMSF037E11+ GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
____________________________________________________________
consensus GATGCTATCTGGGGGTTGGTTCTACTTTCTTCTCTTCTGGGTTCTAATCCTCTCCATTTC
. : . : . : . : . : . :
rJMSF041A10+ CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
rJMSF018I01+ CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
JMFN020E01- CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
rJMSF015E13+ CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
rJMSF028I02+ CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
rJMSF044N18+ CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
rJMSF037E11+ CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
____________________________________________________________
consensus CGTCAAGGTTGGAACCTTCATCTATGCAAGGTAATCTTATGCATCCATCATCAGGGAAGT
. : . : . : . : . : . :
rJMSF041A10+ GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
rJMSF018I01+ GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
JMFN020E01- GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
rJMSF015E13+ GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
rJMSF028I02+ GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
rJMSF044N18+ GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
rJMSF037E11+ GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
____________________________________________________________
consensus GGAACTTTTGCTGCAACATTCCCCAGGACTTGTGGTATCTATTTAGGTGCTGGTACTGGT
. : . : . : . : . : . :
rJMSF041A10+ AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
rJMSF018I01+ AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
JMFN020E01- AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
rJMSF015E13+ AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
rJMSF028I02+ AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
rJMSF044N18+ AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
rJMSF037E11+ AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
____________________________________________________________
consensus AGGGGATTTTGAGTACATTTGTTACTATTAGTATAACAAATTGTCTGAAAAAACAGTACA
. : . : . : . : . : . :
rJMSF041A10+ CATCAGACTGGTGACTT
rJMSF018I01+ CATCAGACTGGTGACTTTGCGT
JMFN020E01- CATCAGACTGGTGACTTTGCGTTCTCAGGGTTTTGTGAATTGGAAAAGCTTTAACAGTCT
rJMSF015E13+ CATCAGACTGGTGACTTTGCGTTCTCAGGGTTTTGTGAATTGGAAAAGCTTTAACAGTCT
rJMSF028I02+ CATCAGACTGGTGACTTTGCGTTCTCAGGGTTTTGTGAATTGGAAAAGCTTTAACAGTCT
rJMSF044N18+ CATCAGACTGGTGACTTTGCGTTCTCAGGGTTTTGTGAATTGGAAAAGCTTTAACAGTCT
rJMSF037E11+ CATCAGACTGGTGACTTTGCGTTCTCAGGGTTTTGTGAATTGGAAAAGCTTTAACAGTCT
____________________________________________________________
consensus CATCAGACTGGTGACTTTGCGTTCTCAGGGTTTTGTGAATTGGAAAAGCTTTAACAGTCT
. : . : . : . : . : . :
JMFN020E01- AAGTTAGTCAAATATATATCATAGAACTC-GCTGGTTCTA
rJMSF015E13+ AAGTTAGTCAAATATATATCATAGAACTC-GCTGGTTCTATATTTAATCCCT
rJMSF028I02+ AAGTTAGTCAAATATATATCATAGAACTC-GCTGGTTCTATATTTAATCCCT
rJMSF044N18+ AAGTTAGTCAAATATATATCATAGAACTCGGCTGGTTCTATATTTAATCCCT
rJMSF037E11+ AAGTTAGTCAAATATATATCATAGAACTC-GCTGGTTCTATATTTAATCCCTAACTTGAA
____________________________________________________________
consensus AAGTTAGTCAAATATATATCATAGAACTC-GCTGGTTCTATATTTAATCCCTAACTTGAA