Contig 008595:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF015J18+                                   TACACAACGTGACAGGAGACACTTGTGTAGCGATG
                      ____________________________________________________________
consensus                                      TACACAACGTGACAGGAGACACTTGTGTAGCGATG
 
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rJMSF015J18+          AACCAGTGGGTCCAAAACCCAACTGCTAAAACGGCTTTGGACGACATACTGCCTTGTGTA
rJMSF037E01+                                                                 GTGTA
                      ____________________________________________________________
consensus             AACCAGTGGGTCCAAAACCCAACTGCTAAAACGGCTTTGGACGACATACTGCCTTGTGTA
 
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rJMSF015J18+          GACAATGCCACTGCACAAGAGACTTTGAAGAAAACCAAGGAAGTCACGTCCCAATTAACT
rJMSF037E01+          GACNATGCCACTGCACAAGAGACNTTGAAGAAAACCAAGGAAGTCACGTCCCAATTAACT
                      ____________________________________________________________
consensus             GACAATGCCACTGCACAAGAGACTTTGAAGAAAACCAAGGAAGTCACGTCCCAATTAACT
 
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rJMSF015J18+          ATCGTTATTAACCTCGTCATAACCAATGTGTCCAACAATAATTTTGCTCCTGTTTTTGTT
rJMSF037E01+          ATCGTTATTAACCTCGTCATAACCAATGTGTCCAACAATAATTTTGCTCCTGTTTTTGTT
                      ____________________________________________________________
consensus             ATCGTTATTAACCTCGTCATAACCAATGTGTCCAACAATAATTTTGCTCCTGTTTTTGTT
 
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rJMSF015J18+          CCGTTTTACTACAACCAATCTGGTCCACTGGTGCCACAACTTTGCAATCCATATAATAGT
rJMSF037E01+          CCGTTTTACTACAACCAATCTGGTCCACTGGTGCCACAACTTTGCAATCCATATAATAGT
                      ____________________________________________________________
consensus             CCGTTTTACTACAACCAATCTGGTCCACTGGTGCCACAACTTTGCAATCCATATAATAGT
 
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rJMSF015J18+          GACCTGACTGATCGAGCATGCAGTCCCGGTGAAGTGGATTTCAACAATGCAACAGAGGTG
rJMSF037E01+          GACCTGACTGATCGAGCATGCAGTCCCGGTGAAGTGGATTTCAACAATGCAACAGAGGTG
                      ____________________________________________________________
consensus             GACCTGACTGATCGAGCATGCAGTCCCGGTGAAGTGGATTTCAACAATGCAACAGAGGTG
 
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rJMSF015J18+          TGGAGTAAGTATGTGTGCCAAGTATCTTCGAGTGGCTTGTGCGTTACACCCGGGCGACTG
rJMSF037E01+          TGGAGTAAGTATGTGTGCCAAGTATCTTCGAGTGGCTTGTGCGTTACACCCGGGCGACTG
                      ____________________________________________________________
consensus             TGGAGTAAGTATGTGTGCCAAGTATCTTCGAGTGGCTTGTGCGTTACACCCGGGCGACTG
 
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rJMSF015J18+          ACTCCAGATTTCTACAGCCAGATGATGGCCTCCGTAAACGTGAGCTATGGTTTGTACAAT
rJMSF037E01+          ACTCCAGATTTCTACAGCCAGATGATGGCCTCCGTAAACGTGAGCTATGGTTTGTACAAT
                      ____________________________________________________________
consensus             ACTCCAGATTTCTACAGCCAGATGATGGCCTCCGTAAACGTGAGCTATGGTTTGTACAAT
 
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rJMSF015J18+          TATGGGCACTTCCTGGTTGATTTGGAAGATTGCGATTTTGTGAGAGACACATTCACTGAA
rJMSF037E01+          TATGGGCACTTCCTGGTTGATTTGGAAGATTGCGATTTTGTGAGAGACACATTCACTGAA
                      ____________________________________________________________
consensus             TATGGGCACTTCCTGGTTGATTTGGAAGATTGCGATTTTGTGAGAGACACATTCACTGAA
 
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rJMSF015J18+          ATATACACAACTCACTGTCCTGGTCTACGGCGCTACAGCCAATGGGTGTACACCGGGCTG
rJMSF037E01+          ATATACACAACTCACTGTCCTGGTCTACGGCGCTACAGCCAATGGGTGTACACCGGGCTG
                      ____________________________________________________________
consensus             ATATACACAACTCACTGTCCTGGTCTACGGCGCTACAGCCAATGGGTGTACACCGGGCTG
 
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rJMSF015J18+          GTGGTTGTTGCAGTTTCAGTAATGCTTTCGCTCACGTTTTGGGTGATATACGGAAGAGAA
rJMSF037E01+          GT--TTGTTGCAGTTTCAGTAATGCTTTCGCTCACGTTTTGGGTGATATACGGAAGAGAA
                      ____________________________________________________________
consensus             GTGGTTGTTGCAGTTTCAGTAATGCTTTCGCTCACGTTTTGGGTGATATACGGAAGAGAA
 
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rJMSF015J18+          AGGCGACACCGTGTGTATACAAAAGCACATACGCCAAAACCTGCAGAAGATGAGTTTGAT
rJMSF037E01+          AGGCGACACCGTGTGTATACAAAAGCACATACGCCAAAACCTGCAGAAGATGAGTTTGAT
                      ____________________________________________________________
consensus             AGGCGACACCGTGTGTATACAAAAGCACATACGCCAAAACCTGCAGAAGATGAGTTTGAT
 
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rJMSF015J18+          GGAGATAAGTACATTAGGGAATAGTGAGCAGGGATAAGTATTTTAGCTACTCTTCTCTAG
rJMSF037E01+          GGAGATAAGTACATTAGGGAATAGTGAGCAGGGATAAGTATTTTAGCTACTCTTCTCTAG
                      ____________________________________________________________
consensus             GGAGATAAGTACATTAGGGAATAGTGAGCAGGGATAAGTATTTTAGCTACTCTTCTCTAG
 
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rJMSF015J18+          CATCTTTATCTTTGAGGCT                                         
rJMSF037E01+          CATCTTTATCTTTGAGGCTTGAACCTTTATTTGTGGATTACTAAACTATATAAGAATCCT
                      ____________________________________________________________
consensus             CATCTTTATCTTTGAGGCTTGAACCTTTATTTGTGGATTACTAAACTATATAAGAATCCT