Contig 008594:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007B21Sequence614007300 (2)672008594 (5)ref|XP_009799920.1|256PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana sylvestris]
JMSF003N08Sequence240003794 (4)777008594 (5)ref|XP_009592648.1|327PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana tomentosiformis]
JMSF019G19Sequence244003794 (4)736008594 (5)ref|XP_009799920.1|299PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana sylvestris]
JMSF037B19Sequence721003794 (4)701008594 (5)ref|XP_009592648.1|262PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana tomentosiformis]
JMSF039C08Sequence693003794 (4)864008594 (5)ref|XP_009592648.1|363PREDICTED: uncharacterized protein DDB_G0274915 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF039C08+                      GAGTACAAGTGCTGCAACAGGGACCTCACCTAAGTTACCATCTGAAAT
                      ____________________________________________________________
consensus                         GAGTACAAGTGCTGCAACAGGGACCTCACCTAAGTTACCATCTGAAAT
 
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rJMSF003N08+                                           ATGGAATGCAGAGCTGCAGGAGCGCNC
rJMSF039C08+          TACCGGAAAAACTATAGAGGAAGTCATCAAGGAATGGAATGCAGAGCTGCAGGAGCGCAC
                      ____________________________________________________________
consensus             TACCGGAAAAACTATAGAGGAAGTCATCAAGGAATGGAATGCAGAGCTGCAGGAGCGCAC
 
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rJMSF003N08+          GACAAATTTCCGAAAGCAAGCCAATGCAATTGCTGAATGGGACAGGAGGATCTTACAAAA
rJMSF019G19+                            AGCCAATGCAATTGCTGAATGGGACAGGAGGATCTTACAAAA
rJMSF039C08+          GACAAATTTCCGAAAGCAAGCCAATGCAATTGCTGAATGGGACAGGAGGATCTTACAAAA
                      ____________________________________________________________
consensus             GACAAATTTCCGAAAGCAAGCCAATGCAATTGCTGAATGGGACAGGAGGATCTTACAAAA
 
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rJMFF007B21+                     TCCTTAAGCTTGAGAGTGAAGTTGCAAAGGTTGTTGAGACACAGGCTAG
rJMSF003N08+          CCGTGATATCCTCCTTAAGCTTGAGAGTGAAGTTGCAAAGGTTGTTGAGACACAGGCTAG
rJMSF019G19+          CCGTGATATCCTCCTTAAGCTTGAGAGTGAAGTTGCAAAGGTTGTTGAGACACAGGCTAG
rJMSF039C08+          CCGTGATATCCTCCTTAAGCTTGAGAGTGAAGTTGCAAAGGTTGTTGAGACACAGGCTAG
rJMSF037B19+                            GCTTGAGAGTGAAGTTGCAAAGGTTGTTGAGACACAGGCTAG
                      ____________________________________________________________
consensus             CCGTGATATCCTCCTTAAGCTTGAGAGTGAAGTTGCAAAGGTTGTTGAGACACAGGCTAG
 
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rJMFF007B21+          CCTAGATCGACATCTTGAGTTAATTGAGACACATCAAGATGAGGTTGACAAGGCATTGCA
rJMSF003N08+          CCTAGAGCGACAGCTTGAGTTAATTGAGACACATCAAGATGAGGTTGACAAGGCATTGCA
rJMSF019G19+          CCTAGAGCGACAGCTTGAGTTAATTGAGACACATCAAGATGAGGTTGACAAGGCATTGCA
rJMSF039C08+          CCTAGAGCGACAGCTTGAGTTAATTGAGACACATCAAGATGAGGTTGACAAGGCATTGCA
rJMSF037B19+          CCTAGAGCGACAGCTTGAGTTAATTGAGACACATCAAGATGAGGTTGACAAGGCATTGCA
                      ____________________________________________________________
consensus             CCTAGAGCGACAGCTTGAGTTAATTGAGACACATCAAGATGAGGTTGACAAGGCATTGCA
 
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rJMFF007B21+          GAGTATGGAAGAAGAAGCTGAACGGATATATAAAGATGAGCGTGAAATGCTTCTTGATGA
rJMSF003N08+          GAGTATGGAAGAAGAAGCTGGACGGATATATAAAGATGAGCGTGAAATGCTTCTTGATGA
rJMSF019G19+          GAGTATGGAAGAAGAAGCTGGACGGATATATAAAGATGAGCGTGAAATGCTTCTTGATGA
rJMSF039C08+          GAGTATGGAAGAAGAAGCTGGACGGATATATAAAGATGAGCGTGAAATGCTTCTTGATGA
rJMSF037B19+          GAGTATGGAAGAAGAAGCTGGACGGATATATAAAGATGAGCGTGAAATGCTTCTTGATGA
                      ____________________________________________________________
consensus             GAGTATGGAAGAAGAAGCTGGACGGATATATAAAGATGAGCGTGAAATGCTTCTTGATGA
 
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rJMFF007B21+          TGAAGCTGCATATACAAGAGATGCAATGTATGAACAGGCAGAATTTGTAGAGAGGGAAAT
rJMSF003N08+          TGAAGCTGCATATACAAGAGATGCAATGTATGAACAGGCAGAATTTGTAGAGAGGGAAAT
rJMSF019G19+          TGAAGCTGCATATACAAGAGATGCAATGTATGAACAGGCAGAATTTGTAGAGAGGGAAAT
rJMSF039C08+          TGAAGCTGCATATACAAGAGATGCAATGTATGAACAGGCAGAATTTGTAGAGAGGGAAAT
rJMSF037B19+          TGAAGCTGCATATACAAGAGATGCAATGTATGAACAGGCAGAATTTGTAGAGAGGGAAAT
                      ____________________________________________________________
consensus             TGAAGCTGCATATACAAGAGATGCAATGTATGAACAGGCAGAATTTGTAGAGAGGGAAAT
 
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rJMFF007B21+          GGAAAAGATGATGGAGCAGATAAAGTTGATCATTAATTCTCTTAATGCAAACCAGGGTGG
rJMSF003N08+          GGAAAAGATGATGGAGCAGATAAAGTCGATCATTAATTCTCTTAATGCAAACCAGGGTGG
rJMSF019G19+          GGAAAAGATGATGGAGCAGATAAAGTCGATCATTAATTCTCTTAATGCAAACCAGGGTGG
rJMSF039C08+          GGAAAAGATGATGGAGCAGATAAAGTCGATCATTAATTCTCTTAATGCAAACCAGGGTGG
rJMSF037B19+          GGAAAAGATGATGGAGCAGATAAAGTCGATCATTAATTCTCTTAATGCAAACCAGGGTGG
                      ____________________________________________________________
consensus             GGAAAAGATGATGGAGCAGATAAAGTCGATCATTAATTCTCTTAATGCAAACCAGGGTGG
 
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rJMFF007B21+          AGAACTAACCGATGGCGTGAATCCACTTGATGTTGTTGTCCGCATTTTGAACAATCAGTT
rJMSF003N08+          AGAACTAACTGATGGCGTGAATCCACTTGATGTTGTTGTCCGCATTTTGAACAATCAGTT
rJMSF019G19+          AGAACTAACTGATGGCGTGAATCCACTTGATGTTGTTGTCCGCATTTTGAACAATCAGTT
rJMSF039C08+          AGAACTAACTGATGGCGTGAATCCACTTGATGTTGTTGTCCGCATTTTGAACAATCAGTT
rJMSF037B19+          AGAACTAACTGATGGCGTGAATCCACTTGATGTTGTTGTCCGCATTTTGAACAATCAGTT
                      ____________________________________________________________
consensus             AGAACTAACTGATGGCGTGAATCCACTTGATGTTGTTGTCCGCATTTTGAACAATCAGTT
 
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rJMFF007B21+          GAGTTCACTGGTCTGGATTGATGAAAAGGCTGAGGATCTCTCTTCACGTATTCAGACGCT
rJMSF003N08+          GAGTTCACTGGTCTGGGTTGATGAAAAGGCCGAGGATCTCTCTTCACGTATTCAGAAGCT
rJMSF019G19+          GAGTTCACTGGTCTGGGTTGATGAAAAGGCCGAGGATCTCTCTTCACGTATTCAGAAGCT
rJMSF039C08+          GAGTTCACTGGTCTGGGTTGATGAAAAGGCCGAGGATCTCTCTTCACGTATTCAGAAGCT
rJMSF037B19+          GAGTTCACTGGTCTGGGTTGATGAAAAGGCCGAGGATCTCTCTTCACGTATTCAGAAGCT
                      ____________________________________________________________
consensus             GAGTTCACTGGTCTGGGTTGATGAAAAGGCCGAGGATCTCTCTTCACGTATTCAGAAGCT
 
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rJMFF007B21+          TGCAAGGCAAGGCTCTTCTGCAGATCGTGGATTGACAGGACCCCGGTTTTTGTTTACCAA
rJMSF003N08+          TGCAAGGCAAGGCTCTTCTGCAGATCGCGGATTGACAGGACCGCGGTTTTTGTTTACCAA
rJMSF019G19+          TGCAAGGCAAGGCTCTTCTGCAGATCGCGGATTGACAGGACCGCGGTTTTTGTTTACCAA
rJMSF039C08+          TGCAAGGCAAGGCTCTTCTGCAGATCGCGGATTGACAGGACCGCGGTTTTTGTTTACCAA
rJMSF037B19+          TGCAAGGCAAGGCTCTTCTGCAGATCGCGGATTGACAGGACCGCGGTTTTTGTTTACCAA
                      ____________________________________________________________
consensus             TGCAAGGCAAGGCTCTTCTGCAGATCGCGGATTGACAGGACCGCGGTTTTTGTTTACCAA
 
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rJMFF007B21+          TTGAACAAAGTAGAAGCTTTGTCCAAAATGCTTAATA                       
rJMSF003N08+          TTGAACAAAGTAGAAGCTTTGTCCAAAATGCATAATAATTCCGCCCCTATTGGCTATTGA
rJMSF019G19+          TTGAACAAAGTAGAAGCTTTGTCCAAAATGCATAATAATTCCGCCCCTATTGGCTATTGA
rJMSF039C08+          TTGAACAAAGTAGAAGCTTTGTCCAAAATGCATAATAATTCCGCCCCTATTGGCTATTGA
rJMSF037B19+          TTGAACAAAGTAGAAGCTTTGTCCAAAATGCATAATAATTCCGCCCCTATTGGCTATTGA
                      ____________________________________________________________
consensus             TTGAACAAAGTAGAAGCTTTGTCCAAAATGCATAATAATTCCGCCCCTATTGGCTATTGA
 
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rJMSF003N08+          GAACGCATATGATCATTGTTCGTCCTTGCAGCCATTGACTCTTTTTACTTCTTATGTTGT
rJMSF019G19+          GAACGCATATGATCATTGTTCGTCCTTGCAGCCATTGACTCTTTTTACTTCTTATGTTGT
rJMSF039C08+          GAACGCATATGATCATTGTTCGTCCTTGCAGCCATTGACTCTTTTTACTTCTTATGTTGT
rJMSF037B19+          GAACGCATATGATCATTGTTCGTCCTTGCAGCCATTGACTCTTTTTACTTCTTATGTTGT
                      ____________________________________________________________
consensus             GAACGCATATGATCATTGTTCGTCCTTGCAGCCATTGACTCTTTTTACTTCTTATGTTGT
 
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rJMSF003N08+          AGTTTTGGGGTTTCCCCTTTCAAAAGGATAGTGCTTCGACGAAATGCTATTTTGTACTCC
rJMSF019G19+          AGTTTTGGGGTTTCCCC-TTCAAAAGGATAGTGCTTCGACGAAATGCTATTTTGTACTCC
rJMSF039C08+          AGTTTTGGGGTTTCCCC-TTCAAAAGGATAGTGCTTCGACGAAATGCTATTTTGTACTCC
rJMSF037B19+          AGTTTTGGGGTTTCCCC-TTCAAAAGGATAGTGCTTCGACGAAATGCTATTTTGTACTCC
                      ____________________________________________________________
consensus             AGTTTTGGGGTTTCCCC-TTCAAAAGGATAGTGCTTCGACGAAATGCTATTTTGTACTCC
 
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rJMSF003N08+          GTAATCTGTACTTGTAA                                           
rJMSF019G19+          GTAATCTGTACTTGTAA                                           
rJMSF039C08+          GTAATCTGTACTTGTAA                                           
rJMSF037B19+          GTAATCTGTACTTGTAACGTCACTGACGGCTATGTTGCATGGAAATTCCAAGAGTCGTTG
                      ____________________________________________________________
consensus             GTAATCTGTACTTGTAACGTCACTGACGGCTATGTTGCATGGAAATTCCAAGAGTCGTTG