Contig 008586:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012N18Sequence451006437 (5)ref|XP_006352238.1|8e-07PREDICTED: protein NLP7-like isoform X1 [Solanum tuberosum]695008586 (3)ref|XP_011070354.1|4e-83PREDICTED: protein NLP7 isoform X2 [Sesamum indicum]
JMSF035I04Sequence696006437 (5)ref|XP_010325347.1|3e-53PREDICTED: protein NLP6-like isoform X2 [Solanum lycopersicum]720008586 (3)ref|XP_011070354.1|5e-83PREDICTED: protein NLP7 isoform X2 [Sesamum indicum]
JMSF038E15Sequence676008586 (3)ref|XP_011070354.1|2e-79PREDICTED: protein NLP7 isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF038E15+                                                                     T
                      ____________________________________________________________
consensus                                                                        T
 
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rJMSF038E15+          GTCAAGGTAGTCCTTACCGTGGAAATGAATCCTCCCCTCNGANTGAGCTAATTCTTTCAC
                      ____________________________________________________________
consensus             GTCAAGGTAGTCCTTACCGTGGAAATGAATCCTCCCCTCNGANTGAGCTAATTCTTTCAC
 
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rJMSF038E15+          CCATTCATTGCCACGNCACAAAAATAGGGAGCAACACCGAATTAACTTGTCAACCAGTGA
rJMSF012N18+           CATTCATTGCCACGACACAAAAATAGGGAGCAACACCGAATTAACTTGTCAACCAGTGA
rJMSF035I04+           CATTCATTGCCACGACACAAAAATAGGGAGCAACACCGAATTAACTTGTCAACCAGTGA
                      ____________________________________________________________
consensus             CCATTCATTGCCACGACACAAAAATAGGGAGCAACACCGAATTAACTTGTCAACCAGTGA
 
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rJMSF038E15+          GAGCAATCAATTTATTGGCTGCCAACTCACTACCCAATACTTTGGTTGCAGAACAACCTC
rJMSF012N18+          GAGCAATCAATTTATTGGCTGCCAACTCACTACCCAATACTTTGGTTGCAGAACAACCTC
rJMSF035I04+          GAGCAATCAATTTATTGGCTGCCAACTCACTACCCAATACTTTGGTTGCAGAACAACCTC
                      ____________________________________________________________
consensus             GAGCAATCAATTTATTGGCTGCCAACTCACTACCCAATACTTTGGTTGCAGAACAACCTC
 
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rJMSF038E15+          AAGAGGCATTCGGTGGAANGNTAATTGAGGATGCTGGCAGCTCTCACNACCTGAGGAATC
rJMSF012N18+          AAGAGGCATTCGGTGGAATGCTAATTGAGGATGCTGGCAGCTCTCACAACCTGAGGAATC
rJMSF035I04+          AAGAGGCATTCGGTGGAATGCTAATTGAGGATGCTGGCAGCTCTCACAACCTGAGGAATC
                      ____________________________________________________________
consensus             AAGAGGCATTCGGTGGAATGCTAATTGAGGATGCTGGCAGCTCTCACAACCTGAGGAATC
 
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rJMSF038E15+          TCTGTTCAGCCGGAGAAAATCCTTTTGATGAACGTATGCCAGAATGCAGNTGGNCTCATC
rJMSF012N18+          TCTGTTCAGCCGGAGAAAATCCTTTTGATGAACGTATGCCAGAATGCAGTTGGACTCATC
rJMSF035I04+          TCTGTTCAGCCGGAGAAAATCCTTTTGATGAACGTATGCCAGAATGCAGTTGGACTCATC
                      ____________________________________________________________
consensus             TCTGTTCAGCCGGAGAAAATCCTTTTGATGAACGTATGCCAGAATGCAGTTGGACTCATC
 
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rJMSF038E15+          CACCTTGTTCCGNGGCTGTACCTGTACNTCCTGACAGAGTGCCACAATATCCTGCTAGGC
rJMSF012N18+          CACCTTGTTCCGTGGCTGTACCTGTACGTCCTGACAGAGTGCCACAATATCCTGCTAGGC
rJMSF035I04+          CACCTTGTTCCGTGGCTGTACCTGTACGTCCTGACAGAGTGCCACAATATCCTGCTAGGC
                      ____________________________________________________________
consensus             CACCTTGTTCCGTGGCTGTACCTGTACGTCCTGACAGAGTGCCACAATATCCTGCTAGGC
 
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rJMSF038E15+          CAGAATTGACAACCATCACAATAAAAGCGACATACAGGGAAGATATTATAAGGTTTCGAC
rJMSF012N18+          CAGAATTGACAACCATCACAATAAAAGCGACATACAGGGAAGATATTATAAGGTTTCGAC
rJMSF035I04+          CAGAATTGACAACCATCACAATAAAAGCGACATACAGGGAAGATATTATAAGGTTTCGAC
                      ____________________________________________________________
consensus             CAGAATTGACAACCATCACAATAAAAGCGACATACAGGGAAGATATTATAAGGTTTCGAC
 
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rJMSF038E15+          TGCCTTTGAGTTCTGGCATTATAAAATTAACAGAGGAAGTGTCGAAGAGACTGAAGTTAG
rJMSF012N18+          TGCCTTTGAGTTCTGGCATTATAAAATTAACAGAGGAAGTGTCGAAGAGACTGAAGTTAG
rJMSF035I04+          TGCCTTTGAGTTCTGGCATTATAAAATTAACAGAGGAAGTGTCGAAGAGACTGAAGTTAG
                      ____________________________________________________________
consensus             TGCCTTTGAGTTCTGGCATTATAAAATTAACAGAGGAAGTGTCGAAGAGACTGAAGTTAG
 
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rJMSF038E15+          AAGTGGGTACCTTTGACATCAAGTATCTAGATGATGATCATGAATGGGTTTTGATTGCTT
rJMSF012N18+          AAGTGGGTACCTTTGACATCAAGTATCTAGATGATGATCATGAATGGGTTTTGATTGCTT
rJMSF035I04+          AAGTGGGTACCTTTGACATCAAGTATCTAGATGATGATCATGAATGGGTTTTGATTGCTT
                      ____________________________________________________________
consensus             AAGTGGGTACCTTTGACATCAAGTATCTAGATGATGATCATGAATGGGTTTTGATTGCTT
 
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rJMSF038E15+          GCGATGCAGACTTGCAAGAATGCATTGACATATCAAGATCATCAGGCAGCACTNTTATCA
rJMSF012N18+          GCGATGCAGACTTGCAAGAATGCATTGACATATCAAGATCATCAGGCAGCACTATTATCA
rJMSF035I04+          GCGATGCAGACTTGCAAGAATGCATTGACATATCAAGATCATCAGGCAGCACTATTATCA
                      ____________________________________________________________
consensus             GCGATGCAGACTTGCAAGAATGCATTGACATATCAAGATCATCAGGCAGCACTATTATCA
 
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rJMSF038E15+          GACNGTTAGTTCATGACATTATGCCCCATCTTGGAAGCTCCTGTGAGAGCTCGNGTGGAT
rJMSF012N18+          GACTGTTAGTTCATGACATTATGCCCCATCTTGGAAGCTCCTGTGAGAGCTCGGGTGGAT
rJMSF035I04+          GACTGTTAGTTCATGACATTATGCCCCATCTTGGAAGCTCCTGTGAGAGCTCGGGTGGAT
                      ____________________________________________________________
consensus             GACTGTTAGTTCATGACATTATGCCCCATCTTGGAAGCTCCTGTGAGAGCTCGGGTGGAT
 
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rJMSF038E15+          GAATTATGAATAGGC                                             
rJMSF012N18+          GAATTATGAATAGGCTAAGGTTGTACACTTGTACGTAGGTAGTAGTCTAGTAGAACCATT
rJMSF035I04+          GAATTATGAATAGGCTAAGGTTGTACACTTGTACGTAGGTAGTAGTCTAGTAGAACCATT
                      ____________________________________________________________
consensus             GAATTATGAATAGGCTAAGGTTGTACACTTGTACGTAGGTAGTAGTCTAGTAGAACCATT
 
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rJMSF012N18+          CTTGCAGTTTTAGGAGCTTTTGTTTAGCACAGTTTT                        
rJMSF035I04+          CTTGCAGTTTTAGGAGCTTTTGTTTAGCACAGTTTTTGGTTATGGGAAATGAAGAAAAAT
                      ____________________________________________________________
consensus             CTTGCAGTTTTAGGAGCTTTTGTTTAGCACAGTTTTTGGTTATGGGAAATGAAGAAAAAT