Contig 008579:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013D05Sequence456000848 (3)584008579 (2)emb|CBI37149.3|1e-35unnamed protein product [Vitis vinifera]
JMSF033P22Sequence671000848 (3)ref|XP_009624075.1|102PREDICTED: uncharacterized protein LOC104115199 [Nicotiana tomentosiformis]541008579 (2)emb|CBI37149.3|9e-31unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF013D05+                          TTATTTTTGAGAGATACAAAAGTGCGAGTAAGAACTGGAAAGTT
                      ____________________________________________________________
consensus                             TTATTTTTGAGAGATACAAAAGTGCGAGTAAGAACTGGAAAGTT
 
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rJMSF013D05+          NTGAAGGAGCTAGAGAAAGCAGCTTTGGTGTACTGGAAGGCCAAAGATCGATTGCCTCCT
rJMSF033P22+           TGAAGGAGCTAGAGAAAGCAGCTTTGGTGTACTGGAAGGCCAAAGATCGATTGCCTCCT
                      ____________________________________________________________
consensus             NTGAAGGAGCTAGAGAAAGCAGCTTTGGTGTACTGGAAGGCCAAAGATCGATTGCCTCCT
 
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rJMSF013D05+          NGGACNGTAAAGATAGACATCNATATTGNGNGGGATTTGGCCTATGCTNTTGATGNTAAA
rJMSF033P22+          CGGACTGTAAAGATAGACATCAATNTTGNGNGGGATTTGGCCTNTGCTNTTGATGTTAAA
                      ____________________________________________________________
consensus             CGGACTGTAAAGATAGACATCAATATTGNGNGGGATTTGGCCTATGCTNTTGATGTTAAA
 
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rJMSF013D05+          GAANGCCCNCNAATNTTGTTTTTGCGNGGNAACNAGATAGNGCNTAGGGAAAAAGATNTG
rJMSF033P22+          GAATGCCCNCNAATNTTGTTTTTGCGNGGNAACNAGATAGTGCNTAGGGAAAAAGATNTG
                      ____________________________________________________________
consensus             GAATGCCCNCNAATNTTGTTTTTGCGNGGNAACNAGATAGTGCNTAGGGAAAAAGATNTG
 
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rJMSF013D05+          CGAACTGCNGATGAGTTGGTTCNGATGATAGCNCNTTTTTNCTNCAATGCCNAAAGGCCT
rJMSF033P22+          CGAACTGCNGATGAGTTGGTTCNGATGATAGCNCNTTTTTNCTNCAATGCCNAAAGGCCT
                      ____________________________________________________________
consensus             CGAACTGCNGATGAGTTGGTTCNGATGATAGCNCNTTTTTNCTNCAATGCCNAAAGGCCT
 
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rJMSF013D05+          GCNTGCNTTAACGATTTGGANGTATNTCCCCCNTTTTAATCAAAGGNTGGTATTTTNCCC
rJMSF033P22+          GCNTGCNTTAACGATTTGGATGTATNTCCNCCNTTTTAATCAAAGGATGGTATTTTNCCC
                      ____________________________________________________________
consensus             GCNTGCNTTAACGATTTGGATGTATNTCCCCCNTTTTAATCAAAGGATGGTATTTTNCCC
 
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rJMSF013D05+          GTCCNGATCAATTCNGGNTTTTTGTCCCCNGTAATTTCAAGGGGNGNTACTGAATTCATN
rJMSF033P22+          GTCCNGATCAATTCNGGNTTTTTGTCCCCNGTAATTTCAAGGGGNGTTNCTGAATTCATN
                      ____________________________________________________________
consensus             GTCCNGATCAATTCNGGNTTTTTGTCCCCNGTAATTTCAAGGGGNGTTACTGAATTCATN
 
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rJMSF013D05+          TAGCNATCNCCCGAAGATTCCCGGGAAAGATGTATGAATATACNTCNTTCAAAGNCTNGG
rJMSF033P22+          TAGCNATCNCCCGAAGATTCCCGGGAAAGATGTNTGAATATACNTCNTTCAAAGNCTNGG
                      ____________________________________________________________
consensus             TAGCNATCNCCCGAAGATTCCCGGGAAAGATGTATGAATATACNTCNTTCAAAGNCTNGG
 
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rJMSF013D05+          CTGGCTNGGAAAAGAGAGGTTGGAATCAAAACNGTTATCAACCCTNGNCTGGNTCCCNTN
rJMSF033P22+          CTGGCTNGGAAAAGAGAGGTTGGAATCAAAACNGTTATCAACCCTAGNCTGGCTCCCNTN
                      ____________________________________________________________
consensus             CTGGCTNGGAAAAGAGAGGTTGGAATCAAAACNGTTATCAACCCTAGNCTGGCTCCCNTN
 
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rJMSF013D05+          TATTTTTTGNGAGTGCGGGGGAAAAGCGAATNTCCGGGTACNTCNTAGAGCNGTATT   
rJMSF033P22+          TATTTTNTGNGAGTGCGGGGGAAAAGCGAATNTCNGGGTACNTCNTAGAGCNGTATTNTC
                      ____________________________________________________________
consensus             TATTTTTTGNGAGTGCGGGGGAAAAGCGAATNTCCGGGTACNTCNTAGAGCNGTATTNTC