Contig 008575:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018P09Sequence360002195 (5)629008575 (5)ref|XP_004250912.1|1e-70PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum lycopersicum]
JMSF020P06Sequence696002195 (5)ref|XP_009798644.1|3e-16PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Nicotiana sylvestris]722008575 (5)ref|XP_011090146.1|7e-87PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Sesamum indicum]
JMSF020P07Sequence684002195 (5)ref|XP_009798644.1|3e-16PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Nicotiana sylvestris]632008575 (5)ref|XP_004250912.1|4e-71PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum lycopersicum]
JMSF032K19Sequence678002195 (5)ref|XP_009798644.1|3e-16PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Nicotiana sylvestris]629008575 (5)ref|XP_004250912.1|9e-72PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum lycopersicum]
JMSF035P07Sequence628002195 (5)ref|XP_009798644.1|2e-16PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Nicotiana sylvestris]615008575 (5)ref|XP_004250912.1|8e-73PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF020P06+ AGC
                      ____________________________________________________________
consensus AGC
 
. : . : . : . : . : . :
rJMSF020P06+ CTCAGCAACTGTACAACCATTTATGTTGCTCCNCCTTAACATTTGCCCGGATCCTGTTTG
                      ____________________________________________________________
consensus CTCAGCAACTGTACAACCATTTATGTTGCTCCNCCTTAACATTTGCCCGGATCCTGTTTG
 
. : . : . : . : . : . :
rJMSF018P09+ GCACCAGAGACTCTTGAAGGGTACAGAAC
rJMSF020P07+ GCACCAGAGACTCTTGAAGGGTACAGAAC
rJMSF020P06+ TACAATAGAAGATGCTNTCCGGCTATTTTTTGCACCAGAGACTCTTGAAGGGTACAGAAC
rJMSF035P07+ CACCAGAGACTCTTGAAGGGTACAGAAC
rJMSF032K19+ GCACCAGAGACTCTTGAAGGGTACAGAAC
                      ____________________________________________________________
consensus TACAATAGAAGATGCTNTCCGGCTATTTTTTGCACCAGAGACTCTTGAAGGGTACAGAAC
 
. : . : . : . : . : . :
rJMSF018P09+ ATCAGCAGATGGGAAGGCTGAAGTGGTGAGTGCGAGCAAGTCTGTCAAGATTNTAGAGCT
rJMSF020P07+ ATCAGCAGATGGGAAGGCTGAAGTGGTGAGTGCGAGCAAGTCTGTCAAGATTNTAGAGCT
rJMSF020P06+ ATCAGCAGATGGGAAGGCTGAAGTGGTGAGTGCGANCAANTNTGTCAAGATTCTAGAGCT
rJMSF035P07+ ATCAGCAGATGGGAAGGCTGAAGTGGTGAGTGCGAGCAAGTCTGTCAAGATTCTAGAGCT
rJMSF032K19+ ATCAGCAGATGGGAAGGCTGAAGTGGTGAGTGCGAGCAAGTCTGTCAAGATTCTAGAGCT
                      ____________________________________________________________
consensus ATCAGCAGATGGGAAGGCTGAAGTGGTGAGTGCGAGCAAGTCTGTCAAGATTCTAGAGCT
 
. : . : . : . : . : . :
rJMSF018P09+ TTNTGATATTATGGTGTTGCATTTGATGCGCTTCAGTTATGGAAGTGAAGGAAGTACCAA
rJMSF020P07+ TTNTGATATTATGGNGTTGCATTTGATGCGCTTCAGTTATGGAAGTGAAGGAAGTACCAA
rJMSF020P06+ TTCTGATATTATGGTGTTGCATTTGATGCGCTTCAGTTATGGAAGTGAAGGAAGTNCCAA
rJMSF035P07+ TTCTGATATTATGGTGTTGCATTTGATGCGCTTCAGTTATGGAAGTGAAGGAAGTACCAA
rJMSF032K19+ TTNTGATATTATGGTGTTGCATTTGATGCGCTTCAGTTATGGAAGTGAAGGAAGTACCAA
                      ____________________________________________________________
consensus TTCTGATATTATGGTGTTGCATTTGATGCGCTTCAGTTATGGAAGTGAAGGAAGTACCAA
 
. : . : . : . : . : . :
rJMSF018P09+ GTTGCACAAACCCGTACACTTCCCTTTGGAGCTTGTGTTTGGTCGGGATTTGCTCGTCTC
rJMSF020P07+ GTTGCACAAACCCGTACACTTCCCTTTGGAGCTTGTGTTTGGTCGGGATTTGCTCGTCTC
rJMSF020P06+ GTTGCNCAAACCCGTACACTTCCCTTTGGAGCTTGTGTTTGGTCGGGATTTGCTCGTCTC
rJMSF035P07+ GTTGCACAAACCCGTACACTTCCCTTTGGAGCTTGTGTTTGGTCGGGATTTGCTCGTCTC
rJMSF032K19+ GTTGCACAAACCCGTACACTTCCCTTTGGAGCTTGTGTTTGGTCGGGATTTGCTCGTCTC
                      ____________________________________________________________
consensus GTTGCACAAACCCGTACACTTCCCTTTGGAGCTTGTGTTTGGTCGGGATTTGCTCGTCTC
 
. : . : . : . : . : . :
rJMSF018P09+ TCCCCATTCCGAGGGTCGGAGGTATGAGCTTGTTGCGACTATAACGCATCATGGGATGGA
rJMSF020P07+ TCCCCATTCCGAGGGTCGGAGGTATGAGCTTGTTGCGACTATAACGCATCATGGGATGGA
rJMSF020P06+ TCCCCATTCCGAGGGTCGGAGGTATGAGCTTGTTGCGACTATAACGCATCATGGGATGGA
rJMSF035P07+ TCCCCATTCCGAGGGTCGGAGGTATGAGCTTGTTGCGACTATAACGCATCATGGGATGGA
rJMSF032K19+ TCCCCATTCCGAGGGTNGGAGGTATGAGCTTGTTGCGACTATAACGCATCATGGGATGGA
                      ____________________________________________________________
consensus TCCCCATTCCGAGGGTCGGAGGTATGAGCTTGTTGCGACTATAACGCATCATGGGATGGA
 
. : . : . : . : . : . :
rJMSF018P09+ CCCTTTTAAGGGTCNCTATACAGCTGATGCCCGCCATCCGAGTGGCAAGNGGCTGCGCTA
rJMSF020P07+ CCCTTTTAAGGGTCNCTATACAGCTGATGCCCGCCATCCGAGTGGCAAGTGGCTGCGCTA
rJMSF020P06+ CCCTTTTAAGGGTCNCTATACAGCTGATGCCCGCCATCCGAGTGGCAAGTGGCTGCGCTA
rJMSF035P07+ CCCTTTTAAGGGTCNCTATACAGCTGATGCCCGCCATCCGAGTGGCAAGTGGCTGCGCTA
rJMSF032K19+ CCCTTTTAAGGGTCNCTATACAGCTGATGCCCGCCATCCGAGTGGCAAGTGGCTGCGCTA
                      ____________________________________________________________
consensus CCCTTTTAAGGGTCNCTATACAGCTGATGCCCGCCATCCGAGTGGCAAGTGGCTGCGCTA
 
. : . : . : . : . : . :
rJMSF018P09+ TGATGATGCTGCCGTCACCCCAATCCCAACAAGCAAAGTGCTGCATGAGCAAGCTTACAT
rJMSF020P07+ TGATGATGCTGCCGTCACCCCAATCCCAACAAGCAAAGTGCTGCATGAGCAAGCTTACAT
rJMSF020P06+ TGATGATGCTGCCGTCACCCCAATNCCAACAAGCAAAGTGNTGCATGAGCAAGCTTACAT
rJMSF035P07+ TGATGATGCTGCCGTCACCCCAATCCCAACAAGCAAAGTGCTGCATGAGCAAGCTTACAT
rJMSF032K19+ TGATGATGCTGCCGTCACCCCAATCCCAACAAGCAAAGTGCTGCATGAGCAAGCTTACAT
                      ____________________________________________________________
consensus TGATGATGCTGCCGTCACCCCAATCCCAACAAGCAAAGTGCTGCATGAGCAAGCTTACAT
 
. : . : . : . : . : . :
rJMSF018P09+ TNTNTTNTACAAACAGCTGTAATTGTACAATTCAGAATGAGAGTTGCGCTATTTTGCTGA
rJMSF020P07+ TNTTTTNTACAAACAGCTGTAATTGTACAATTCAGAATGAGAGTTGCGCTATTTTGCTGA
rJMSF020P06+ TNTTTTNTACAAACAGCTGTAATTGTACAATTCAGAATGAGAGTTGCGCTATTTTGNTGA
rJMSF035P07+ TNTTTTNTACAAACAGCTGTAATTGTACAATTCAGAATGAGAGTTGCGCTATTTTGCTGA
rJMSF032K19+ TNTTTTNTACAAACAGCTGTAATTGTACAATTCAGAATGAGAGTTGCGCTATTTTGCTGA
                      ____________________________________________________________
consensus TNTTTTNTACAAACAGCTGTAATTGTACAATTCAGAATGAGAGTTGCGCTATTTTGCTGA
 
. : . : . : . : . : . :
rJMSF018P09+ TCCAGACTNTCAGCCATTTGCGGGCGGATATTTCTTTGTACATGTATTACNGTAGAAGCA
rJMSF020P07+ TCCAGACTNTCAGCCATTTGCGGGCGGATATTTCTTTGTACATGTATTACNGTAGAAGCA
rJMSF020P06+ TCCAGACTTTCAGCCATTTGCGGGCGGATATTTCTTTGTACATGTATTACNGTAGAAGCA
rJMSF035P07+ TCCAGACTNTCAGCCATTTGCGGGCGGATATTTCTTTGTACATGTATTACNGTAGAAGCA
rJMSF032K19+ TCCAGACTNTCAGCCATTTGCGGGCGGATATTTCTTTGTACATGTATTACNGTAGAAGCA
                      ____________________________________________________________
consensus TCCAGACTTTCAGCCATTTGCGGGCGGATATTTCTTTGTACATGTATTACNGTAGAAGCA
 
. : . : . : . : . : . :
rJMSF018P09+ AAAATAGGTGACAGATNTCNCNGAAGGTAACCATATAGGAAGGATTANGTCNGTCTTTTC
rJMSF020P07+ AAAATAGGNGACAGATNTCACAGAAGGTAACCATATAGGAAGGATTATGTCNGTCTTTTC
rJMSF020P06+ AAAATAGGNGACAGATNTCACNGAAGGTAACCATATAGGAAGGATTATGTCNGTCTTTTC
rJMSF035P07+ AAAATAGGNGACAGATCTCNCNGAAGGTAACCATATAGGAAGGATTATGTCNGTCTTTTC
rJMSF032K19+ AAAATAGGNGACAGATCTCNCNGAAGGTAACCATATAGGAAGGATTATGTCTGTCTTTTC
                      ____________________________________________________________
consensus AAAATAGGTGACAGATCTCACAGAAGGTAACCATATAGGAAGGATTATGTCTGTCTTTTC
 
. : . : . : . : . : . :
rJMSF018P09+ TCTTCTCTTTTTTTTTTTCTAAAAATTAAATTCCCTGACTCACAACCT
rJMSF020P07+ TCTTCTCTTTTTTTTTTTCTAAAAATTAAATTCCCTGACTCACAACCT
rJMSF020P06+ TCTTCTCTTTTTTTTTTTCTAAAAATTAAATTCCCTGACTCACAACCT
rJMSF035P07+ TCTTCTCTTTTTTTTTTTCTAAAAATTAAATTCCCTGACTCACAACC
rJMSF032K19+ TCTTCTCTTTTTTTTTTTCTAAAAATTAAATTCCCTGACTCACAACCTTGAATGCCTCCT
                      ____________________________________________________________
consensus TCTTCTCTTTTTTTTTTTCTAAAAATTAAATTCCCTGACTCACAACCTTGAATGCCTCCT