Contig 008568:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041N23Sequence619008568 (5)ref|XP_002278255.1|4e-99PREDICTED: actin-related protein 7 [Vitis vinifera] emb|CBI24906.3| unnamed prot637008568 (5)ref|XP_002278255.1|2e-92PREDICTED: actin-related protein 7 [Vitis vinifera] emb|CBI24906.3| unnamed prot
JMSF012H07Sequence240013396 (4)751008568 (5)ref|XP_002278255.1|2e-114PREDICTED: actin-related protein 7 [Vitis vinifera] emb|CBI24906.3| unnamed prot
JMSF027N07Sequence582013396 (4)ref|XP_009621117.1|4e-14PREDICTED: actin-related protein 7 [Nicotiana tomentosiformis]714008568 (5)ref|XP_009783911.1|2e-110PREDICTED: actin-related protein 7 isoform X2 [Nicotiana sylvestris]
JMSF031D21Sequence679013396 (4)emb|CDP04578.1|5e-46unnamed protein product [Coffea canephora]689008568 (5)ref|XP_009783911.1|8e-110PREDICTED: actin-related protein 7 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF027N07+                                      GCTGCTGGCAGAAAAGCTGAGTAAATCAAATC
rJMSF012H07+                   GCGGTGTAGATCTGACAAAGCTGCTGGCAGAAAAGCTGAGTAAATCAAATC
rJMSF031D21+                                         GCTGGCAGAAAAGCTGAGTAAATCAAATC
                      ____________________________________________________________
consensus                      GCGGTGTAGATCTGACAAAGCTGCTGGCAGAAAAGCTGAGTAAATCAAATC
 
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rJMSF027N07+          CAATGGTGAAACTCAAGATGTCAGATGTTGAGAAGATAAAAGAGCAATATGCATGGTGTG
rJMSF012H07+          CAATGGTGAAACTCAAGATGTCAGATGTTGAGAAGATAAAAGAGCAATATGCATGGTGTG
JMFF041N23-                                       TGAGAAGATAAAAGAGCAATATGCATGGTGTG
rJMSF031D21+          CAATGGTGAAACTCAAGATGTCAGATGTTGAGAAGATAAAAGAGCAATATGCATGGTGTG
                      ____________________________________________________________
consensus             CAATGGTGAAACTCAAGATGTCAGATGTTGAGAAGATAAAAGAGCAATATGCATGGTGTG
 
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rJMSF027N07+          CTGAGGATGATATTGCTTATGAGAAGAAGATGCAACAAACTTGCCTAGAAGAGGAACACA
rJMSF012H07+          CTGAGGATGATATTGCTTATGAGAAGAAGATGCAACAAACTTGCCTAGAAGAGGAACACA
rJMFF041N23+          CTGAGGATGATATTGCTTATGAGAAGAAGATGCAACAAACTTGCCTAGAAGAGGAACACA
JMFF041N23-           CTGAGGATGATATTGCTTATGAGAAGAAGATGCAACAAACTTGCCTAGAAGAGGAACACA
rJMSF031D21+          CTGAGGATGATATTGCTTATGAGAAGAAGATGCAACAAACTTGCCTAGAAGAGGAACACA
                      ____________________________________________________________
consensus             CTGAGGATGATATTGCTTATGAGAAGAAGATGCAACAAACTTGCCTAGAAGAGGAACACA
 
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rJMSF027N07+          CACTTCCTGACGGCCAGGTTATCAAAATTGGAAAAGAAAGATATACTATAGGGGAGGCCT
rJMSF012H07+          CACTTCCTGACGGCCAGGTTATCAAAATTGGAAAAGAAAGATATACTATAGGGGAGGCCT
rJMFF041N23+          CACTTCCTGACGGCCAGGTTATCAAAATTGGAAAAGAAAGATATACTATAGGGGAGGCCT
JMFF041N23-           CACTTCCTGACGGCCAGGTTATCAAAATTGGAAAAGAAAGATATACTATAGGGGAGGCCT
rJMSF031D21+          CACTTCCTGACGGCCAGGTTATCAAAATTGGAAAAGAAAGATATACTATAGGGGAGGCCT
                      ____________________________________________________________
consensus             CACTTCCTGACGGCCAGGTTATCAAAATTGGAAAAGAAAGATATACTATAGGGGAGGCCT
 
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rJMSF027N07+          TATTCCAATCCTCAATTCTGGGTTTAGAAACACATGGAATTGTGGAGCAACTTGTTCGTA
rJMSF012H07+          TATTCCAATCCTCAATTCTGGGTTTAGAAACACATGGAATTGTGGAGCAACTTGTTCGTA
rJMFF041N23+          TATTCCAATCCTCAATTCTGGGTTTAGAAACACATGGAATTGTGGAGCAACTTGTTCGTA
JMFF041N23-           TATTCCAATCCTCAATTCTGGGTTTAGAAACACATGGAATTGTGGAGCAACTTGTTCGTA
rJMSF031D21+          TATTCCAATCCTCAATTCTGGGTTTAGAAACACATGGAATTGTGGAGCAACTTGTTCGTA
                      ____________________________________________________________
consensus             TATTCCAATCCTCAATTCTGGGTTTAGAAACACATGGAATTGTGGAGCAACTTGTTCGTA
 
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rJMSF027N07+          GTATTTCAACTGTATCATCTGAAAATCACCGCCAACTGCTAGAAAACACTGTGCTTTGTG
rJMSF012H07+          GTATTTCAACTGTATCATCTGAAAATCACCGCCAACTGCTAGAAAACACTGTGCTTTGTG
rJMFF041N23+          GTATTTCAACTGTATCATCTGAAAATCACCGCCAACTGCTAGAAAACACTGTGCTTTGTG
JMFF041N23-           GTATTTCAACTGTATCATCTGAAAATCACCGCCAACTGCTAGAAAACACTGTGCTTTGTG
rJMSF031D21+          GTATTTCAACTGTATCATCTGAAAATCACCGCCAACTGCTAGAAAACACTGTGCTTTGTG
                      ____________________________________________________________
consensus             GTATTTCAACTGTATCATCTGAAAATCACCGCCAACTGCTAGAAAACACTGTGCTTTGTG
 
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rJMSF027N07+          GTGGCACTACTTCAATCACTGGGTTTGAAGATCGATTCCAGAAAGAAGCTAGCCTCTGCT
rJMSF012H07+          GTGGCACTACTTCAATCACTGGGTTTGAAGATCGATTCCAGAAAGAAGCTAGCCTCTGCT
rJMFF041N23+          GTGGCACTACTTCAATCACTGGGTTTGAAGATCGATTCCAGAAAGAAGCTAGCCTCTGCT
JMFF041N23-           GTGGCACTACTTCAATCACTGGGTTTGAAGATCGATTCCAGAAAGAAGCTAGCCTCTGCT
rJMSF031D21+          GTGGCACTACTTCAATCACTGGGTTTGAAGATCGATTCCAGAAAGAAGCTAGCCTCTGCT
                      ____________________________________________________________
consensus             GTGGCACTACTTCAATCACTGGGTTTGAAGATCGATTCCAGAAAGAAGCTAGCCTCTGCT
 
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rJMSF027N07+          CATCTGCTATCAGCCCTGCTCTAGTAAAGCCTCCGGAGTACATGCCAGAGAAGTTGGTTA
rJMSF012H07+          CATCTGCTATCAGCCCTGCTCTAGTAAAGCCTCCGGAGTACATGCCAGAGAAGTTGGTTA
rJMFF041N23+          CATCTGCTATCAGCCCTGCTCTAGTAAAGCCTCCGGAGTACATGCCAGAGAAGTTGGTTA
JMFF041N23-           CATCTGCTATCAGCCCTGCTCTAGTAAAGCCTCCGGAGTACATGCCAGAGAAGTTGGTTA
rJMSF031D21+          CATCTGCTATCAGCCCTGCTCTAGTAAAGCCTCCGGAGTACATGCCAGAGAAGTTGGTTA
                      ____________________________________________________________
consensus             CATCTGCTATCAGCCCTGCTCTAGTAAAGCCTCCGGAGTACATGCCAGAGAAGTTGGTTA
 
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rJMSF027N07+          TGTATTCGGCATGGGTTGGTGGCGCCATACTTGCAAAAGTTGTGTTCCCGCAAAACCAAC
rJMSF012H07+          TGTATTCGGCATGGGTTGGTGGCGCCATACTTGCAAAAGTTGTGTTCCCGCAAAACCAAC
rJMFF041N23+          TGTATTCGGCATGGGTTGGTGGCGCCATACTTGCAAAAGTTGTGTTCCCGCAAAACCAAC
JMFF041N23-           TGTATTCGGCATGGGTTGGTGGCGCCATACTTGCAAAAGTTGTGTTCCCGCAAAACCAAC
rJMSF031D21+          TGTATTCGGCATGGGTTGGTGGCGCCATACTTGCAAAAGTTGTGTTCCCGCAAAACCAAC
                      ____________________________________________________________
consensus             TGTATTCGGCATGGGTTGGTGGCGCCATACTTGCAAAAGTTGTGTTCCCGCAAAACCAAC
 
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rJMSF027N07+          ACATAACCAAGGCAGACTATGATGAAACCGGACCTTCCATTGTTCACAAAAAATGTTTTT
rJMSF012H07+          ACATAACCAAGGCAGACTATGATGAAACCGGACCTTCCATTGTTCACAAAAAATGTTTTT
rJMFF041N23+          ACATAACCAAGGCAGTCTATGATGAAACCGGACCTTCCATTGTTCACAAAAAATGTTTTT
JMFF041N23-           ACATAACCAAGGCAGTCTATGATGAAACCGGACCTTCCATTGTTCACAAAAAATGTTTTT
rJMSF031D21+          ACATAACCAAGGCAGACTATGATGAAACCGGACCTTCCATTGTTCACAAAAAATGTTTTT
                      ____________________________________________________________
consensus             ACATAACCAAGGCAGTCTATGATGAAACCGGACCTTCCATTGTTCACAAAAAATGTTTTT
 
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rJMSF027N07+          AG                                                          
rJMSF012H07+          AG                                                          
rJMFF041N23+          AG                                                          
JMFF041N23-           AGCATCTGCTTCATTCGTATATTATAATCTAACATGTATTATATAGTTGGTTGTTGTATT
rJMSF031D21+          AGCATCTGCTTCATTCGTATATTATAATCTAACATGTATTATATAGTTGGTTGTTGTATT
                      ____________________________________________________________
consensus             AGCATCTGCTTCATTCGTATATTATAATCTAACATGTATTATATAGTTGGTTGTTGTATT
 
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JMFF041N23-           GTTTTCTTGTTATGTTCCTAGGTTGCAGCAATACTAATATCTAACTG             
rJMSF031D21+          GTTTTCTTGTTATGTTCCTAGGTTGCAGCAATACTAATATCTAACTGTTACGTACTACTA
                      ____________________________________________________________
consensus             GTTTTCTTGTTATGTTCCTAGGTTGCAGCAATACTAATATCTAACTGTTACGTACTACTA