Contig 008566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030N19Sequence653010804 (3)ref|XP_006344463.1|2e-68PREDICTED: ferric reduction oxidase 8, mitochondrial-like [Solanum tuberosum]614008566 (2)ref|XP_009613740.1|1e-35PREDICTED: ferric reduction oxidase 8, mitochondrial isoform X2 [Nicotiana tome
JMSF035J16Sequence698010804 (3)ref|XP_009798365.1|3e-76PREDICTED: ferric reduction oxidase 8, mitochondrial isoform X2 [Nicotiana sylv725008566 (2)ref|XP_009613740.1|1e-59PREDICTED: ferric reduction oxidase 8, mitochondrial isoform X2 [Nicotiana tome

Alignment

This contig is upended


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rJMSF035J16+                                          ACTACTCGATTTTAAGCTGAGAATCCAT
                      ____________________________________________________________
consensus                                             ACTACTCGATTTTAAGCTGAGAATCCAT
 
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rJMSF035J16+          TTGAAACTAAAAGTTTATGTGACCCAAGAAAAGCAGACTAATCAAACCTTGCTGGAAATG
                      ____________________________________________________________
consensus             TTGAAACTAAAAGTTTATGTGACCCAAGAAAAGCAGACTAATCAAACCTTGCTGGAAATG
 
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rJMSF035J16+          CTTGATCATGAGGTATCTGTAACACAACTGAGAAACTTTGAGTCCAAGTTCTCAGGCTAC
                      ____________________________________________________________
consensus             CTTGATCATGAGGTATCTGTAACACAACTGAGAAACTTTGAGTCCAAGTTCTCAGGCTAC
 
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rJMSF035J16+          TTGCCATATGGACCTGAGAATTTGTACTGGATGGCAGCCATTGCTGCAACTGCATCCATT
                      ____________________________________________________________
consensus             TTGCCATATGGACCTGAGAATTTGTACTGGATGGCAGCCATTGCTGCAACTGCATCCATT
 
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rJMSF035J16+          CTTTTTATGCTATTCCTTGCTTCCTTCAACCATGTTTTTCTTCACACTGGTAAGAAGTCA
rJMSF030N19+                                                        CTGGTAAGAAGTCA
                      ____________________________________________________________
consensus             CTTTTTATGCTATTCCTTGCTTCCTTCAACCATGTTTTTCTTCACACTGGTAAGAAGTCA
 
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rJMSF035J16+          TCAAAGGACGAAACTCCCTCTTCAGTAATTGATCTCTTCCTTTTATGCTCTTTCGCTATG
rJMSF030N19+          TCAAAGGACGAAACTCCCTCTTCAGTAATTGATCTCTTCCTTTTATGCTCTTTCGCTATG
                      ____________________________________________________________
consensus             TCAAAGGACGAAACTCCCTCTTCAGTAATTGATCTCTTCCTTTTATGCTCTTTCGCTATG
 
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rJMSF035J16+          GCTTTGCTCTGCGTCGCTCTAATAGCTGCTGTCAGGAGATGGAAATGCCTTAGAAAAGAT
rJMSF030N19+          GCTTTGCTNTGCGTCGCTCTAATAGCTGCTGTCAGGAGATGGAAATGCCTTAGAAAAGAT
                      ____________________________________________________________
consensus             GCTTTGCTCTGCGTCGCTCTAATAGCTGCTGTCAGGAGATGGAAATGCCTTAGAAAAGAT
 
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rJMSF035J16+          ATGCTACCACTCGCAGACAAAGAAAGTATAGCGTTGAAACCGCGGTTAACAGAAACGAAC
rJMSF030N19+          ATGCTACCACTCGCAGACAAAGAAAGTATAGCGTTGAAACCGCGGTTAACAGAAACGAAC
                      ____________________________________________________________
consensus             ATGCTACCACTCGCAGACAAAGAAAGTATAGCGTTGAAACCGCGGTTAACAGAAACGAAC
 
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rJMSF035J16+          AGAAGCCATGATCAGGAACTTGAAATCCATTTTGGAGCAAGGCCAAATTTCCAAGATATC
rJMSF030N19+          NGAAGCCNTGATCAGGAACTTGAAATCCATTTTGGAGCAAGGCCAAATTTCCAAGATATC
                      ____________________________________________________________
consensus             AGAAGCCATGATCAGGAACTTGAAATCCATTTTGGAGCAAGGCCAAATTTCCAAGATATC
 
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rJMSF035J16+          TTTGCAGAGTTTACAAATGAATCCAGGGGTTCATATACAGGAGTGTTTATCTGTGGACCT
rJMSF030N19+          TTTGCAGAGTTTACAAATGAATCCAGGGGTTCATATACAGGAGTGTTTATCTGTGGACCT
                      ____________________________________________________________
consensus             TTTGCAGAGTTTACAAATGAATCCAGGGGTTCATATACAGGAGTGTTTATCTGTGGACCT
 
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rJMSF035J16+          GAGTCAATGAAAGAGTCTGTGGCTTTAGCCTGCCAGCTGAGCTCTCAAGCTTGTAAGCCA
rJMSF030N19+          GAGTCAATGAAAGAGTCTGTGGCTTTAGCCTGCCAGCTGAGCTCTCAAGCTTGTAAGCCA
                      ____________________________________________________________
consensus             GAGTCAATGAAAGAGTCTGTGGCTTTAGCCTGCCAGCTGAGCTCTCAAGCTTGTAAGCCA
 
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rJMSF035J16+          CAGTTCAGCTTCCATTCCCTAAATTTTTCACTGTAATCCAAACAATGATGGTTGTGTTAT
rJMSF030N19+          CAGTTCAGCTTCCATTCCCTAAATTTTTCACTGTAATCCAAACAATGATGGTTGTGTTAT
                      ____________________________________________________________
consensus             CAGTTCAGCTTCCATTCCCTAAATTTTTCACTGTAATCCAAACAATGATGGTTGTGTTAT
 
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rJMSF035J16+          TATACTGATAAAGCTAGAACTGAT                                    
rJMSF030N19+          TATACTGATAAAGCTAGAACTGATCTGTGTTCATCCCNCTAAGCTAGTACTAATAATGTA
                      ____________________________________________________________
consensus             TATACTGATAAAGCTAGAACTGATCTGTGTTCATCCCNCTAAGCTAGTACTAATAATGTA
 
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rJMSF030N19+          CTATTATCTTCCTTTTATCTCCTCCTGGCATCTTGTTTATTGTTAGGCAAAGTCTTTCTT
                      ____________________________________________________________
consensus             CTATTATCTTCCTTTTATCTCCTCCTGGCATCTTGTTTATTGTTAGGCAAAGTCTTTCTT
 
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rJMSF030N19+          GATTTGTGGTCATCATCCCACTTTCACATGTAGTTAACATATTAGATATTTGTAGTACAT
                      ____________________________________________________________
consensus             GATTTGTGGTCATCATCCCACTTTCACATGTAGTTAACATATTAGATATTTGTAGTACAT