Contig 008565:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007N15+                           CATATCCAGCAGGAACTTTGTTCATGGAGACTCCATATCCATG
                      ____________________________________________________________
consensus                              CATATCCAGCAGGAACTTTGTTCATGGAGACTCCATATCCATG
 
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rJMSF007N15+          TTCTCCGCTTGCCCAGATAGAGTTCCAAAANTTCGATGAGGTTATGGATCCAGCTCTGTC
                      ____________________________________________________________
consensus             TTCTCCGCTTGCCCAGATAGAGTTCCAAAANTTCGATGAGGTTATGGATCCAGCTCTGTC
 
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rJMSF007N15+          AACAGATGAAGAAGCAGTTCTGGATCCAAGTGGCAGCCAATCTGGTCGGAAGTCGTCTTT
                      ____________________________________________________________
consensus             AACAGATGAAGAAGCAGTTCTGGATCCAAGTGGCAGCCAATCTGGTCGGAAGTCGTCTTT
 
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rJMSF007N15+          ATCCATCAATTCACTTCACGTTTTGAGTGTCAACCAGCTTTTAGAATCTGTTCTAGAAAC
                      ____________________________________________________________
consensus             ATCCATCAATTCACTTCACGTTTTGAGTGTCAACCAGCTTTTAGAATCTGTTCTAGAAAC
 
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rJMSF007N15+          TGCTCGACAAGTTGCAAGCTTCCCAGTTTCCTCTACACCAGTACCTTATGATCAAGTAAA
                      ____________________________________________________________
consensus             TGCTCGACAAGTTGCAAGCTTCCCAGTTTCCTCTACACCAGTACCTTATGATCAAGTAAA
 
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rJMSF014E12+                                                                  GTTT
rJMSF007N15+          GAATCAGTGTGAAGCCCTTGTGACGGGTAAACAGGAAAAGATGTCAGTGCTCCAGAGTTT
                      ____________________________________________________________
consensus             GAATCAGTGTGAAGCCCTTGTGACGGGTAAACAGGAAAAGATGTCAGTGCTCCAGAGTTT
 
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rJMSF014E12+          CAAGNTGCAACAGGATGCAAAGGCAGTACTCTTCTCAAAAGANGCTGATGGGNATGTCCC
rJMSF007N15+          CAAGCTGCAACAGGATGCAAAGGCAGTACTCTTCTCAAATGAAACTGATGGGAATGTCCC
                      ____________________________________________________________
consensus             CAAGCTGCAACAGGATGCAAAGGCAGTACTCTTCTCAAATGAAGCTGATGGGAATGTCCC
 
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rJMSF014E12+          TCTTTTNACGAACATAGCATNGGAGCTTTCAGNAGAAGTGAAANCAGGGAGCATTGTACC
rJMSF007N15+          TCTTTTAACGAACATAGCATTGGAGCTTTCAGAAGAAGTGAAAGCAGGGAGCATTGTACC
                      ____________________________________________________________
consensus             TCTTTTAACGAACATAGCATTGGAGCTTTCAGAAGAAGTGAAAGCAGGGAGCATTGTACC
 
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rJMSF014E12+          CATAAATGGGCAAAACCATCTTTCTTGTGCACNGGAAAGTGGGCAGCANTCCTTTCGNCT
rJMSF007N15+          CATAAATGGGCAAAACCATCTTTCTTGTGCACTGGAAAGTGGGCAGCAATCCTTTCGACT
                      ____________________________________________________________
consensus             CATAAATGGGCAAAACCATCTTTCTTGTGCACTGGAAAGTGGGCAGCAATCCTTTCGACT
 
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rJMSF014E12+          ACCNCCTTCCAGTCCGTACGACAAATTTATGAAAGCGGCTNGATGCTAAAGATATACCTG
rJMSF007N15+          ACCACCTTCCAGTCCGTACGACAAATTTATGAAAGCGGCTCGATGCTAAAGATATACCTG
rJMSF030J22+                   CAGTCCGTACGACAAATNTATGAAAGNGGCTCGATGCTNAAGATATACCTG
                      ____________________________________________________________
consensus             ACCACCTTCCAGTCCGTACGACAAATTTATGAAAGCGGCTCGATGCTAAAGATATACCTG
 
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rJMSF014E12+          TTATATATATATGCGGTGTGCGTCTGTCTCATACATGTAAGTAACTGTATGTTCATAACT
rJMSF007N15+          TTATATATATATGCGGTGTGCGTCTGTCTCATACATGTAAGTAACTGTATGTTCATAACT
rJMSF030J22+          NTATATNTATNTGCGGTGTGCGTCTGTCTCATACATGTAAGTAACTGTATGTTCATAACT
                      ____________________________________________________________
consensus             TTATATATATATGCGGTGTGCGTCTGTCTCATACATGTAAGTAACTGTATGTTCATAACT
 
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rJMSF014E12+          TGTTACTCCCAAAGATTTCCATNCTTTTTNGNTTCTTTATACCAGGTNTTATGTTATTAA
rJMSF007N15+          TGTTACTCCCAAAGATTTCCATACTTTTTTGATTCTTTATACCAGGTCTTATGTTATTAA
rJMSF030J22+          NGTTACTCCCAAAGATNTCCATACTNTTTTGATTCTTNATACCAGGTCTTATGTTATTAA
                      ____________________________________________________________
consensus             TGTTACTCCCAAAGATTTCCATACTTTTTTGATTCTTTATACCAGGTCTTATGTTATTAA
 
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rJMSF014E12+          G                                                           
rJMSF007N15+          GGCTTTCTGTCTTTTTAGTACATTTATTGTCTTCCACATCATGTG               
rJMSF030J22+          GNCTTTCNGTCTTNNTAGNACATTTATNGTCTTCCACATCATGTGTGGAACTGGGCAGGC
                      ____________________________________________________________
consensus             GGCTTTCTGTCTTTTTAGTACATTTATTGTCTTCCACATCATGTGTGGAACTGGGCAGGC
 
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rJMSF030J22+          TGGAAATAAATGTTGGAAAGCNTGANTTANTCNTNNGCAGACACATCAGTATTGTTGTTT
                      ____________________________________________________________
consensus             TGGAAATAAATGTTGGAAAGCNTGANTTANTCNTNNGCAGACACATCAGTATTGTTGTTT