| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006B24 | Sequence | 516 | 008564 (9) | emb|CDP09397.1| | 4e-58 | unnamed protein product [Coffea canephora] | 488 | 008564 (9) | emb|CDP09397.1| | 3e-58 | unnamed protein product [Coffea canephora] |
| JMFN043N17 | Sequence | 527 | 008564 (9) | ref|XP_007209764.1| | 5e-59 | hypothetical protein PRUPE_ppa013350mg [Prunus persica] gb|EMJ10963.1| hypotheti | |||||
| JMSF018C06 | Sequence | 476 | 008564 (9) | ref|XP_007209764.1| | 1e-54 | hypothetical protein PRUPE_ppa013350mg [Prunus persica] gb|EMJ10963.1| hypotheti | 447 | 008564 (9) | ref|XP_007209764.1| | 9e-55 | hypothetical protein PRUPE_ppa013350mg [Prunus persica] gb|EMJ10963.1| hypotheti |
| JMSF030F20 | Sequence | 676 | 021091 | ref|XP_009777410.1| | 4e-125 | PREDICTED: probable methyltransferase PMT5 isoform X1 [Nicotiana sylvestris] | 711 | 008564 (9) | emb|CDP09397.1| | 2e-55 | unnamed protein product [Coffea canephora] |
| JMSF032D08 | Sequence | 526 | 008564 (9) | emb|CDP09397.1| | 4e-58 | unnamed protein product [Coffea canephora] | |||||
| JMSF033D05 | Sequence | 496 | 008564 (9) | ref|XP_007209764.1| | 2e-54 | hypothetical protein PRUPE_ppa013350mg [Prunus persica] gb|EMJ10963.1| hypotheti | 440 | 008564 (9) | ref|XP_007209764.1| | 8e-55 | hypothetical protein PRUPE_ppa013350mg [Prunus persica] gb|EMJ10963.1| hypotheti |
This contig is upended
. : . : . : . : . : . :
rJMSF030F20+ GAGGCTACTTTGTGTTAACCTCACCTACAAGCCAGCAAAATAGAGATTTTA
____________________________________________________________
consensus GAGGCTACTTTGTGTTAACCTCACCTACAAGCCAGCAAAATAGAGATTTTA
. : . : . : . : . : . :
JMSF018C06- AGGA
rJMSF018C06+ AGGA
JMSF033D05- AGGA
JMSF032D08- AGGA
rJMSF033D05+ AGGA
rJMSF030F20+ TAAGTTCAAAGAAGGGAAGACTATCAACTCCATTTGAAAAGTTCTGCTTCGACAACAGGA
____________________________________________________________
consensus TAAGTTCAAAGAAGGGAAGACTATCAACTCCATTTGAAAAGTTCTGCTTCGACAACAGGA
. : . : . : . : . : . :
JMSF018C06- ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
rJMSF018C06+ ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
JMSF033D05- ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
JMSF032D08- ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
rJMFF006B24+ AGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
JMFN043N17+ TGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
JMFF006B24- AGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
rJMSF033D05+ ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
rJMSF030F20+ ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
____________________________________________________________
consensus ATTCTAGGGTTTCGCTGCCGCTTGCACCTCTCCTTCCACACCAGCCTGCAGTCTCAGCAG
. : . : . : . : . : . :
JMSF018C06- CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAA-GTTGGTATTGTAGGAAAGT
rJMSF018C06+ CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAA-GTTGGTATTGTAGGAAAGT
JMSF033D05- CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAA-GTTGGTATTGTAGGAAAGT
JMSF032D08- CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAAGGCTGGTATTGTAGGAAAGT
rJMFF006B24+ CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAAGGCTGGTATTGTAGGAAAGT
JMFN043N17+ CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAAGGCTGGTATTGTAGGAAAGT
JMFF006B24- CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAAGGCTGGTATTGTAGGAAAGT
rJMSF033D05+ CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAA-GTTGGTATTGTAGGAAAGT
rJMSF030F20+ CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAAGGCTGGTATTGTAGGAAAGT
____________________________________________________________
consensus CGTTCTTCTAGCTCATCAATATGACTAAGAGAACCAAGAAGGCTGGTATTGTAGGAAAGT
. : . : . : . : . : . :
JMSF018C06- ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
rJMSF018C06+ ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
JMSF033D05- ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
JMSF032D08- ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
rJMFF006B24+ ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
JMFN043N17+ ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
JMFF006B24- ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
rJMSF033D05+ ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
rJMSF030F20+ ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
____________________________________________________________
consensus ATGGTACTCGTTATGGTGCCAGTTTGAGGAAGCAGATCAAGAAGATGGAAGTCAGCCAGC
. : . : . : . : . : . :
JMSF018C06- ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
rJMSF018C06+ ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
JMSF033D05- ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
JMSF032D08- ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
rJMFF006B24+ ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
JMFN043N17+ ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
JMFF006B24- ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
rJMSF033D05+ ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
rJMSF030F20+ ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
____________________________________________________________
consensus ATAGCAAGTACTTCTGTGAGTTTTGTGGCAAGTATGCTGTTAAGAGAAAGGCAGTTGGAA
. : . : . : . : . : . :
JMSF018C06- TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
rJMSF018C06+ TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
JMSF033D05- TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
JMSF032D08- TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
rJMFF006B24+ TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
JMFN043N17+ TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
JMFF006B24- TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
rJMSF033D05+ TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
rJMSF030F20+ TATGCGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
____________________________________________________________
consensus TATGGGGATGTAAGGACTGTGGGAAAGTCAAGGCTGGTGGTGCATATACACTAAACACCG
. : . : . : . : . : . :
JMSF018C06- CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
rJMSF018C06+ CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
JMSF033D05- CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
JMSF032D08- CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
rJMFF006B24+ CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
JMFN043N17+ CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCT
JMFF006B24- CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
rJMSF033D05+ CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
rJMSF030F20+ CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
____________________________________________________________
consensus CTAGTGCTGTGACTGTAAGGAGCACCATCCGAAGGCTGCGTGAGCAGACTGAAAGCTAGA
. : . : . : . : . : . :
JMSF018C06- TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
rJMSF018C06+ TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
JMSF033D05- TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
JMSF032D08- TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
rJMFF006B24+ TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
JMFF006B24- TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
rJMSF033D05+ TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
rJMSF030F20+ TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
____________________________________________________________
consensus TCATTTCGTGGAATACAAGTTTGAGTTGTGCTGCACAATATGTTGGGTTTTAGAACCAAT
. : . : . : . : . : . :
JMSF018C06- GTTAAAGCCNAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATG
rJMSF018C06+ GTTAAAGCCAAAGTTTTGATTTT
JMSF033D05- GTTAAAGCCAAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATGTGTTTTCG
JMSF032D08- GTTAAAGCCAAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATGTGTTTTCG
rJMFF006B24+ GTTAAAGCCAAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATGTGTTTTCG
JMFF006B24- GTTAAAGCCAAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATGTGTTTTCG
rJMSF033D05+ GTTAAAGCCAAAGTTT
rJMSF030F20+ GTTAAAGCCAAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATGTGTTTTCG
____________________________________________________________
consensus GTTAAAGCCAAAGTTTTGATTTTTGTTAAACTAAGTTATGTATTTTTGAATGTGTTTTCG
. : . : . : . : . : . :
JMSF033D05- TC
JMSF032D08- TCAAATTTAGTTATGTTTTTATACTGTTTTC
rJMFF006B24+ TCAAATTTAGTTA
JMFF006B24- TCAAATTTAGTTATGTTTTTATACTGTTTTC
rJMSF030F20+ TCAAATTTAGTTATGTTTTTATACTGTTTTCATTCTCTTCTGCCCTCTTACCGTTATTGG
____________________________________________________________
consensus TCAAATTTAGTTATGTTTTTATACTGTTTTCATTCTCTTCTGCCCTCTTACCGTTATTGG
. : . : . : . : . : . :
rJMSF030F20+ TTATCCAGTCTAGGCTTGGAATGCCATACTGAAAGATCTGCAGGTTGCATAGAGATCTTG
____________________________________________________________
consensus TTATCCAGTCTAGGCTTGGAATGCCATACTGAAAGATCTGCAGGTTGCATAGAGATCTTG