Contig 008553:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027N05Sequence648008553 (2)ref|XP_009796155.1|4e-100PREDICTED: glutathione S-transferase T1-like [Nicotiana sylvestris]710008553 (2)ref|XP_009796155.1|7e-115PREDICTED: glutathione S-transferase T1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF027N05-                               GGGATTGCTGGAGTCGTCCGTCGTTCCCACTTTAAATCCC
                      ____________________________________________________________
consensus                                 GGGATTGCTGGAGTCGTCCGTCGTTCCCACTTTAAATCCC
 
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JMSF027N05-           GCAATCGAACGCCACAATTTCAAAATATATCGAAATCTCCAATTCAGTTATCGCCGCCGG
                      ____________________________________________________________
consensus             GCAATCGAACGCCACAATTTCAAAATATATCGAAATCTCCAATTCAGTTATCGCCGCCGG
 
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JMSF027N05-           AGAGAGAAGAGATGACGTTGAAACTGTATGTTGATCGTATGTCCCAGCCTTCTCGTGCTC
                      ____________________________________________________________
consensus             AGAGAGAAGAGATGACGTTGAAACTGTATGTTGATCGTATGTCCCAGCCTTCTCGTGCTC
 
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JMSF027N05-           TTCTCATTTTCTGCAAGGCAAATGGGATAGAGTTTGAAGAAGTCCAAATAGAGCTCTCTA
rJMSF027N05+                                        AGTTTGAAGAAGTCCAAATAGAGCTCTCTA
                      ____________________________________________________________
consensus             TTCTCATTTTCTGCAAGGCAAATGGGATAGAGTTTGAAGAAGTCCAAATAGAGCTCTCTA
 
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JMSF027N05-           AAGCCCAGCATCGAACTCCCGAATTCGGAGAAATTAACCCCATGAAACAAGTGCCTGCGA
rJMSF027N05+          AAGCCCAGCATCGAACTCCCGAATTCGGAGAAATTAACCCCATGAAACAAGTGCCTGCGA
                      ____________________________________________________________
consensus             AAGCCCAGCATCGAACTCCCGAATTCGGAGAAATTAACCCCATGAAACAAGTGCCTGCGA
 
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JMSF027N05-           TGGTGGATGGAGACTTCACGCTGTTTGAAAGTCATGCAATTCTCAAATATCTTGCTTGTG
rJMSF027N05+          TGGTGGATGGAGACTTCACGCTGTTTGAAAGTCATGCAATTCTCAAATATCTTGCTTGTG
                      ____________________________________________________________
consensus             TGGTGGATGGAGACTTCACGCTGTTTGAAAGTCATGCAATTCTCAAATATCTTGCTTGTG
 
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JMSF027N05-           CAAATAATGTTGCTGATCATTGGTACCCAGCTGATCTACGCGAAAGAGCAATGGTAGACT
rJMSF027N05+          CAAATAATGTTGCTGATCATTGGTACCCAGCTGATCTACGCGAAAGAGCAATGGTAGACT
                      ____________________________________________________________
consensus             CAAATAATGTTGCTGATCATTGGTACCCAGCTGATCTACGCGAAAGAGCAATGGTAGACT
 
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JMSF027N05-           CGGTGTTAGACTGGCACCACTCTAACTTACGCCGTGGCTCAGTTGGGTATCTTTTGAATG
rJMSF027N05+          CGGTGTTAGACTGGCACCACTCTAACTTACGCCGTGGCTCAGTTGGGTATCTTTTGAATG
                      ____________________________________________________________
consensus             CGGTGTTAGACTGGCACCACTCTAACTTACGCCGTGGCTCAGTTGGGTATCTTTTGAATG
 
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JMSF027N05-           GTACATTTGCACCTGCATTAGGCTTGCCTTTAAACTCACAAGCAGCAGCTGAAGGCGAGA
rJMSF027N05+          GTACATTTGCACCTGCATTAGGCTTGCCTTTAAACTCACAAGCAGCAGCTGAAGGCGAGA
                      ____________________________________________________________
consensus             GTACATTTGCACCTGCATTAGGCTTGCCTTTAAACTCACAAGCAGCAGCTGAAGGCGAGA
 
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JMSF027N05-           AACTGCTGTCTGCTTCCCTTAACAAGATTGACTCCTTCTGGCTCCAGGGAAATGGAAAAT
rJMSF027N05+          AACTGCTGTCTGCTTCCCTTAACAAGATTGACTCCTTCTGGCTCCAGGGAAATGGAAAAT
                      ____________________________________________________________
consensus             AACTGCTGTCTGCTTCCCTTAACAAGATTGACTCCTTCTGGCTCCAGGGAAATGGAAAAT
 
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JMSF027N05-           TTCTACTCGGAAATACCCAACCTTCCATTGCAGACCTTAGCTTAATTTGTGAA       
rJMSF027N05+          TTCTACTCGGAAATACCCAACCTTCCATTGCAGACCTTAGCTTAATTTGTGAAATAACAG
                      ____________________________________________________________
consensus             TTCTACTCGGAAATACCCAACCTTCCATTGCAGACCTTAGCTTAATTTGTGAAATAACAG
 
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rJMSF027N05+          AACTACAGGTTGTGGATGAGAAGGATCATGACAGAATACTAAGCCCATTCAAGAAAGTTG
                      ____________________________________________________________
consensus             AACTACAGGTTGTGGATGAGAAGGATCATGACAGAATACTAAGCCCATTCAAGAAAGTTG
 
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rJMSF027N05+          TGAAATGGATTGAAGATGTGAAGGAAGCAACTGCTCCACATTTTGATGAAGTGCACACCA
                      ____________________________________________________________
consensus             TGAAATGGATTGAAGATGTGAAGGAAGCAACTGCTCCACATTTTGATGAAGTGCACACCA
 
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rJMSF027N05+          CACTTTATAATGTCAAAGAGATGATGAAGCAGCAACGATCTGAGAAGTGAAGTAAGCAAA
                      ____________________________________________________________
consensus             CACTTTATAATGTCAAAGAGATGATGAAGCAGCAACGATCTGAGAAGTGAAGTAAGCAAA
 
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rJMSF027N05+          TTAAACAACATTTGGATATGTAGCTTGCTCGTTAAAGTACTTAAACCCTGATGTCCCCAT
                      ____________________________________________________________
consensus             TTAAACAACATTTGGATATGTAGCTTGCTCGTTAAAGTACTTAAACCCTGATGTCCCCAT