clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF026L13 | Sequence | 690 | 005231 (2) | ref|XP_010106391.1| | 2e-11 | hypothetical protein L484_000987 [Morus notabilis] gb|EXC10342.1| hypothetical p | 729 | 008548 (3) | ref|XP_002512268.1| | 7e-29 | S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] g |
JMSF039C19 | Sequence | 720 | 005231 (2) | ref|XP_010106391.1| | 2e-11 | hypothetical protein L484_000987 [Morus notabilis] gb|EXC10342.1| hypothetical p | 800 | 008548 (3) | gb|AFK42953.1| | 8e-48 | unknown [Lotus japonicus] |
JMSF043B04 | Sequence | 639 | 008548 (3) | ref|XP_002512268.1| | 7e-09 | S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] g |
This contig is upended
. : . : . : . : . : . :
rJMSF039C19+ ATTTGATATATGCAAGTGCTGTTTTCCTTCAT
____________________________________________________________
consensus ATTTGATATATGCAAGTGCTGTTTTCCTTCAT
. : . : . : . : . : . :
rJMSF039C19+ ATGCCCGATAAGCTTGTATGGGCTGGGTTAGAGAGACTTGCTGATAAATTAAAACCTTTA
rJMSF026L13+ AAAACCNTTA
____________________________________________________________
consensus ATGCCCGATAAGCTTGTATGGGCTGGGTTAGAGAGACTTGCTGATAAATTAAAACCTTTA
. : . : . : . : . : . :
rJMSF039C19+ GATGGTCGTATTTTTGTGTCACACAATATAAAGTTTTGTTCAAGATTAGGAGGAGACGAA
rJMSF026L13+ GATGGTCGTATTTTTGTGTCACACAATATAAAGTTTTGTTCAAGATTAGGAGGAGACGAA
____________________________________________________________
consensus GATGGTCGTATTTTTGTGTCACACAATATAAAGTTTTGTTCAAGATTAGGAGGAGACGAA
. : . : . : . : . : . :
rJMSF039C19+ TGCACAAAAAGGCTAAGTAATCTTGGCCTTGAGTATCTTGGGAAGCACACTCATGATAGT
rJMSF043B04+ AAGTAATCTTGNCCTTGAGTATCTTGGGAAGCACACTCATGATAGT
rJMSF026L13+ TGCACAAAAAGGCTAAGTAATCTTGGCCTTGAGTATCTTGGGAAGCACACTCATGATAGT
____________________________________________________________
consensus TGCACAAAAAGGCTAAGTAATCTTGGCCTTGAGTATCTTGGGAAGCACACTCATGATAGT
. : . : . : . : . : . :
rJMSF039C19+ TTTCTCTTCAACCACTATGAGATTTGGTTTGAATTTAGGCGTTTCAAGGCTTAAGA-GGT
rJMSF043B04+ TTTCTCTTCAACCACTATGAGATTTGGTTTGAATTTAGGCGTTTCAAGGCTTAAGAGGGT
rJMSF026L13+ TTTCTCTTCAACCACTATGAGATTTGGTTTGAATTTAGGCGTTTCAAGGCTTAAGA-GGT
____________________________________________________________
consensus TTTCTCTTCAACCACTATGAGATTTGGTTTGAATTTAGGCGTTTCAAGGCTTAAGA-GGT
. : . : . : . : . : . :
rJMSF039C19+ GGAGATTGATAATTTGTATTTCCGAGGAAGCAATTGGAACTGTGTTCTCATTGTTCTTCT
rJMSF043B04+ GGAGATTGATAATTTGTATTTCCGAGGAAGCAATTGGAACTGTGTTCTCATTGTTCTTCT
rJMSF026L13+ GGAGATTGATAATTTGTATTTCCGAGGAAGCAATTGGAACTGTGTTCTCATTGTTCTTCT
____________________________________________________________
consensus GGAGATTGATAATTTGTATTTCCGAGGAAGCAATTGGAACTGTGTTCTCATTGTTCTTCT
. : . : . : . : . : . :
rJMSF039C19+ GATTCATTCTTTCATTTATGAGGAAGTAATCTTGGCATTGAGTATCTCGGGAAGCACATT
rJMSF043B04+ GATTCATTCTTTCATTTATGAGGAAGTAATCTTGGCATTGAGTATCTCGGGAAGCACATT
rJMSF026L13+ GATTCATTCTTTCATTTATGAGGAAGTAATCTTGGCATTGAGTATCTCGGGAAGCACATT
____________________________________________________________
consensus GATTCATTCTTTCATTTATGAGGAAGTAATCTTGGCATTGAGTATCTCGGGAAGCACATT
. : . : . : . : . : . :
rJMSF039C19+ ATGATAGTTTGCTCTTCAACCACTACGAGATTTGGTTTGAATTTAGGTGCTTCAAGGCTT
rJMSF043B04+ ATGATAGTTTGCTCTTCAACCACTACGAGATTTGGTTTGAATTTAGGTGCTTCAAGGCTT
rJMSF026L13+ ATGATAGTTTGCTCTTCAACCACTACGAGATTTGGTTTGAATTTAGGTGCTTCAAGGCTT
____________________________________________________________
consensus ATGATAGTTTGCTCTTCAACCACTACGAGATTTGGTTTGAATTTAGGTGCTTCAAGGCTT
. : . : . : . : . : . :
rJMSF039C19+ AAAAATACATACATTCAGATGGAGATTGATAGTTCATATTTCTGAGGATGCAATTGATCA
rJMSF043B04+ AAAAATACATACATTCAGATGGAGATTGATAGTTCATATTTCTGAGGATGCAATTGATCA
rJMSF026L13+ AAAAATACATACATTCAGATGGAGATTGATAGTTCATATTTCTGAGGATGCAATTGATCA
____________________________________________________________
consensus AAAAATACATACATTCAGATGGAGATTGATAGTTCATATTTCTGAGGATGCAATTGATCA
. : . : . : . : . : . :
rJMSF039C19+ GCACTCAGAACCATCTGCTCATCTTGTTCTTATTGTTCCCTTGATCCATTCTTTACCGGA
rJMSF043B04+ GCACTCAGAACCATCTGCTCATCTTGTTCTTATTGTTCCCTTGATCCATTCTTTACCGGA
rJMSF026L13+ GCACTCAGAACCATCTGCTCATCTTGTTCTTATTGTTCCCTTGATCCATTCTTTACCGGA
____________________________________________________________
consensus GCACTCAGAACCATCTGCTCATCTTGTTCTTATTGTTCCCTTGATCCATTCTTTACCGGA
. : . : . : . : . : . :
rJMSF039C19+ AACATGACACCTATGCACTGTTTCGCGATGTGCAAGAGAAATGACAGATTTTTGATAGAG
rJMSF043B04+ AACATGACACCTATGCACTGTTTCGCGATGTGCAAGAGAAATGACAGATTTTTGATAGAG
rJMSF026L13+ AACATGACACCTATGCACTGTTTCGCGATGTGCAAGAGAAATGACAGATTTTTGATAGAG
____________________________________________________________
consensus AACATGACACCTATGCACTGTTTCGCGATGTGCAAGAGAAATGACAGATTTTTGATAGAG
. : . : . : . : . : . :
rJMSF039C19+ GAGCTTAGTGGTCATTAAGTTGTAGTTGAAGTGTAGGAGTCTGCTCTGAACTTACCATGG
rJMSF043B04+ GAGCTTAGTGGTCATTAAGTTGTAGTTGAAGTGTAGGAGTCTGCTCTGAACTTACCATGG
rJMSF026L13+ GAGCTTAGTGGTCATTAAGTTGTAGTTGAAGTGTAGGAGTCTGCTCTGAACTTACCATGG
____________________________________________________________
consensus GAGCTTAGTGGTCATTAAGTTGTAGTTGAAGTGTAGGAGTCTGCTCTGAACTTACCATGG
. : . : . : . : . : . :
rJMSF039C19+ AGAATGTTATTCACCATGTCATCACTGTATTGTAGTTATATATGCTAGGCAGTTAGACAG
rJMSF043B04+ AGAATGTTATTCACCATGTCATCACTGTATTGTAGTTATATATGCTAGGCAGTTAGACAG
rJMSF026L13+ AGAATGTTATTCACCATGTCATCACTGTATTGTAGTTATATATGCTAGGCAGTTAGACAG
____________________________________________________________
consensus AGAATGTTATTCACCATGTCATCACTGTATTGTAGTTATATATGCTAGGCAGTTAGACAG
. : . : . : . : . : . :
rJMSF039C19+ TTATGTCATAATC
rJMSF043B04+ TTATGTCATAATC
rJMSF026L13+ TTATGTCATAATCACATTTTAGCATGCCCATATGTGTAACTTTCTGATGTATATTGAATT
____________________________________________________________
consensus TTATGTCATAATCACATTTTAGCATGCCCATATGTGTAACTTTCTGATGTATATTGAATT