Contig 008547:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018D07Sequence510002008 (2)756008547 (4)emb|CDP16651.1|1e-82unnamed protein product [Coffea canephora]
JMSF026L02Sequence668006754 (3)ref|XP_009625334.1|2e-07PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'748008547 (4)gb|KDO52089.1|3e-52hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]
JMSF028D04Sequence695006754 (3)ref|XP_009625334.1|7e-10PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'688008547 (4)gb|KDO52089.1|2e-64hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]
JMSF052A13Sequence668006754 (3)ref|XP_009625334.1|2e-09PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'814008547 (4)gb|KDO52089.1|6e-64hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]

Alignment

This contig is upended


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rJMSF052A13+                                   GTTCTTGGTTCTCTTGGAGAAAACAATTTAGGGGG
                      ____________________________________________________________
consensus                                      GTTCTTGGTTCTCTTGGAGAAAACAATTTAGGGGG
 
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rJMSF028D04+                 ATTCTCAAGTTAAGTTGATTAGAATGAACCCAAAAGATTAATGGCTGAGTGTA
rJMSF052A13+          ATGGGGAATTCTCAAGTTAAGTTGATTAGAATGAACCCAAAAGATTAATGGCTGAGTGTA
                      ____________________________________________________________
consensus             ATGGGGAATTCTCAAGTTAAGTTGATTAGAATGAACCCAAAAGATTAATGGCTGAGTGTA
 
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rJMSF028D04+          TGGAGTGGTATAAACTAGAATGAATTACACTTGTTTGCCATCTTAGCCTCTTCTGTTCCT
rJMSF052A13+          TGGAGTGGTATAAACTAGAATGAATTACACTTGTTTGCCATCTTAGCCTCTTCTGTTCCT
                      ____________________________________________________________
consensus             TGGAGTGGTATAAACTAGAATGAATTACACTTGTTTGCCATCTTAGCCTCTTCTGTTCCT
 
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rJMSF028D04+          TCCACTATTTAATTTTGTTTTTGCAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
rJMSF052A13+          TCCACTATTTAATTTTGTTTTTGCAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
rJMSF018D07+                                 CAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
rJMSF026L02+                                        CTGAGAGGGCGTTGTTTTTATGGANCAATG
                      ____________________________________________________________
consensus             TCCACTATTTAATTTTGTTTTTGCAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
 
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rJMSF028D04+          ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
rJMSF052A13+          ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
rJMSF018D07+          ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
rJMSF026L02+          ATCACA-TGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
                      ____________________________________________________________
consensus             ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
 
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rJMSF028D04+          CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
rJMSF052A13+          CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
rJMSF018D07+          CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
rJMSF026L02+          CATTGGAGAAAAATTCGAGAACCCACTGCAATCAAGCAGTGCAAAGTTTGACACTAAATG
                      ____________________________________________________________
consensus             CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
 
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rJMSF028D04+          TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
rJMSF052A13+          TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
rJMSF018D07+          TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
rJMSF026L02+          TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
                      ____________________________________________________________
consensus             TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
 
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rJMSF028D04+          AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
rJMSF052A13+          AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
rJMSF018D07+          AGGAAGATGAATCCCGCGAGCAAGGGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
rJMSF026L02+          AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
                      ____________________________________________________________
consensus             AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
 
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rJMSF028D04+          TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
rJMSF052A13+          TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
rJMSF018D07+          TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
rJMSF026L02+          TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
                      ____________________________________________________________
consensus             TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
 
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rJMSF028D04+          TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
rJMSF052A13+          TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
rJMSF018D07+          TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
rJMSF026L02+          TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
                      ____________________________________________________________
consensus             TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
 
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rJMSF028D04+          ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
rJMSF052A13+          ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
rJMSF018D07+          ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
rJMSF026L02+          ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
                      ____________________________________________________________
consensus             ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
 
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rJMSF028D04+          CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGNAATGCCTGCCATTCTTCCAGG
rJMSF052A13+          CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
rJMSF018D07+          CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
rJMSF026L02+          CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
                      ____________________________________________________________
consensus             CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
 
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rJMSF028D04+          TGA                                                         
rJMSF052A13+          TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
rJMSF018D07+          TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
rJMSF026L02+          TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
                      ____________________________________________________________
consensus             TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
 
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rJMSF052A13+          ACATATGGAATTGGGTGGAAATAGTTTCCTCAAGATTTTATAGTCTGAACACCTAGCTT 
rJMSF018D07+          ACATATGGAATTGGGTGGAAATAGTTT-CTCAAGATTTTATAGTCTGAACACCTAGCTTG
rJMSF026L02+          ACATATGGAATTGGGTGGAAATAGTTT-CTCAAGATTTTATAGTCTGAACACCTAGCTTG
                      ____________________________________________________________
consensus             ACATATGGAATTGGGTGGAAATAGTTT-CTCAAGATTTTATAGTCTGAACACCTAGCTTG
 
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rJMSF018D07+          AATTAATTTGGATAGTAAACTAAATGTGGCAT                            
rJMSF026L02+          AATTAATTTGGATAGTAAACTAAATGTGGCATTCTCTTTGTTTGTCTAGAAAAGAAAGGG
                      ____________________________________________________________
consensus             AATTAATTTGGATAGTAAACTAAATGTGGCATTCTCTTTGTTTGTCTAGAAAAGAAAGGG
 
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rJMSF026L02+          CTTCATTTTGCAGGTCCCCCTCTCTAGATAATTTTGCATGTAGTTTCATTTGTGTACTCT
                      ____________________________________________________________
consensus             CTTCATTTTGCAGGTCCCCCTCTCTAGATAATTTTGCATGTAGTTTCATTTGTGTACTCT