Contig 008547:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018D07Sequence510002008 (2)756008547 (4)emb|CDP16651.1|1e-82unnamed protein product [Coffea canephora]
JMSF026L02Sequence668006754 (3)ref|XP_009625334.1|2e-07PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'748008547 (4)gb|KDO52089.1|3e-52hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]
JMSF028D04Sequence695006754 (3)ref|XP_009625334.1|7e-10PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'688008547 (4)gb|KDO52089.1|2e-64hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]
JMSF052A13Sequence668006754 (3)ref|XP_009625334.1|2e-09PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'814008547 (4)gb|KDO52089.1|6e-64hypothetical protein CISIN_1g0107852mg, partial [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052A13+ GTTCTTGGTTCTCTTGGAGAAAACAATTTAGGGGG
                      ____________________________________________________________
consensus GTTCTTGGTTCTCTTGGAGAAAACAATTTAGGGGG
 
. : . : . : . : . : . :
rJMSF028D04+ ATTCTCAAGTTAAGTTGATTAGAATGAACCCAAAAGATTAATGGCTGAGTGTA
rJMSF052A13+ ATGGGGAATTCTCAAGTTAAGTTGATTAGAATGAACCCAAAAGATTAATGGCTGAGTGTA
                      ____________________________________________________________
consensus ATGGGGAATTCTCAAGTTAAGTTGATTAGAATGAACCCAAAAGATTAATGGCTGAGTGTA
 
. : . : . : . : . : . :
rJMSF028D04+ TGGAGTGGTATAAACTAGAATGAATTACACTTGTTTGCCATCTTAGCCTCTTCTGTTCCT
rJMSF052A13+ TGGAGTGGTATAAACTAGAATGAATTACACTTGTTTGCCATCTTAGCCTCTTCTGTTCCT
                      ____________________________________________________________
consensus TGGAGTGGTATAAACTAGAATGAATTACACTTGTTTGCCATCTTAGCCTCTTCTGTTCCT
 
. : . : . : . : . : . :
rJMSF028D04+ TCCACTATTTAATTTTGTTTTTGCAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
rJMSF052A13+ TCCACTATTTAATTTTGTTTTTGCAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
rJMSF018D07+ CAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
rJMSF026L02+ CTGAGAGGGCGTTGTTTTTATGGANCAATG
                      ____________________________________________________________
consensus TCCACTATTTAATTTTGTTTTTGCAGGTGGCTGAGAGGGCGTTGTTTTTATGGAACAATG
 
. : . : . : . : . : . :
rJMSF028D04+ ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
rJMSF052A13+ ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
rJMSF018D07+ ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
rJMSF026L02+ ATCACA-TGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
                      ____________________________________________________________
consensus ATCACATTGAGAACTTAATCAAACAAAATCGCAAAGTTATACTGCCAATTATCTTCCCCG
 
. : . : . : . : . : . :
rJMSF028D04+ CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
rJMSF052A13+ CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
rJMSF018D07+ CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
rJMSF026L02+ CATTGGAGAAAAATTCGAGAACCCACTGCAATCAAGCAGTGCAAAGTTTGACACTAAATG
                      ____________________________________________________________
consensus CATTGGAGAAAAATTCGAGAACCCACTGGAATCAAGCAGTGCAAAGTTTGACACTAAATG
 
. : . : . : . : . : . :
rJMSF028D04+ TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
rJMSF052A13+ TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
rJMSF018D07+ TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
rJMSF026L02+ TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
                      ____________________________________________________________
consensus TTCGCAAACTCTTCTCTGATATTGACGCTGAACTTTTTGAGGAGTGCTTGCACAAATTTC
 
. : . : . : . : . : . :
rJMSF028D04+ AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
rJMSF052A13+ AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
rJMSF018D07+ AGGAAGATGAATCCCGCGAGCAAGGGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
rJMSF026L02+ AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
                      ____________________________________________________________
consensus AGGAAGATGAATCCCGCGAGCAAGAGATAAAAATGAAACGTGAAGCAACTTGGAAGCGTC
 
. : . : . : . : . : . :
rJMSF028D04+ TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
rJMSF052A13+ TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
rJMSF018D07+ TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
rJMSF026L02+ TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
                      ____________________________________________________________
consensus TAGAAGAAATTGCTGGGATAAAAGCTGCAAGTAATGAACCAGTTCTTGTCTCACACAGGG
 
. : . : . : . : . : . :
rJMSF028D04+ TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
rJMSF052A13+ TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
rJMSF018D07+ TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
rJMSF026L02+ TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
                      ____________________________________________________________
consensus TGGCCCCTCGTGCAACATCTGGCTAAAGACTTGGGAATCCTATTTTGTCACTAGCTCTTC
 
. : . : . : . : . : . :
rJMSF028D04+ ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
rJMSF052A13+ ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
rJMSF018D07+ ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
rJMSF026L02+ ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
                      ____________________________________________________________
consensus ATTGTACTGACTGGCATGATGACTGAGGATGTGAATCATGAACAAGGGACGTCGATTTAT
 
. : . : . : . : . : . :
rJMSF028D04+ CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGNAATGCCTGCCATTCTTCCAGG
rJMSF052A13+ CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
rJMSF018D07+ CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
rJMSF026L02+ CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
                      ____________________________________________________________
consensus CATTAACAAGAATCACACTCTCTTCGTTCATGGTATCGTAATGCCTGCCATTCTTCCAGG
 
. : . : . : . : . : . :
rJMSF028D04+ TGA
rJMSF052A13+ TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
rJMSF018D07+ TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
rJMSF026L02+ TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
                      ____________________________________________________________
consensus TGAATGGAACACTATGTTGGATATGAACTACCCTCTCCCCGATTTGGACACGAGGGCTGT
 
. : . : . : . : . : . :
rJMSF052A13+ ACATATGGAATTGGGTGGAAATAGTTTCCTCAAGATTTTATAGTCTGAACACCTAGCTT
rJMSF018D07+ ACATATGGAATTGGGTGGAAATAGTTT-CTCAAGATTTTATAGTCTGAACACCTAGCTTG
rJMSF026L02+ ACATATGGAATTGGGTGGAAATAGTTT-CTCAAGATTTTATAGTCTGAACACCTAGCTTG
                      ____________________________________________________________
consensus ACATATGGAATTGGGTGGAAATAGTTT-CTCAAGATTTTATAGTCTGAACACCTAGCTTG
 
. : . : . : . : . : . :
rJMSF018D07+ AATTAATTTGGATAGTAAACTAAATGTGGCAT
rJMSF026L02+ AATTAATTTGGATAGTAAACTAAATGTGGCATTCTCTTTGTTTGTCTAGAAAAGAAAGGG
                      ____________________________________________________________
consensus AATTAATTTGGATAGTAAACTAAATGTGGCATTCTCTTTGTTTGTCTAGAAAAGAAAGGG
 
. : . : . : . : . : . :
rJMSF026L02+ CTTCATTTTGCAGGTCCCCCTCTCTAGATAATTTTGCATGTAGTTTCATTTGTGTACTCT
                      ____________________________________________________________
consensus CTTCATTTTGCAGGTCCCCCTCTCTAGATAATTTTGCATGTAGTTTCATTTGTGTACTCT