Contig 008546:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006J08Sequence292009199 (3)ref|XP_009600216.1|6e-24PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 310008546 (2)ref|XP_010113026.1|8e-09putative leucine-rich repeat receptor-like protein kinase [Morus notabilis] gb|
JMSF026J04Sequence640009199 (3)ref|XP_009600216.1|1e-97PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 760008546 (2)ref|XP_010113026.1|1e-87putative leucine-rich repeat receptor-like protein kinase [Morus notabilis] gb|

Alignment

This contig is upended


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rJMSF026J04+                              ACGAAAGGTCATGTATCAACTCAAGTTAAAGGCACGTTGG
                      ____________________________________________________________
consensus                                 ACGAAAGGTCATGTATCAACTCAAGTTAAAGGCACGTTGG
 
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rJMSF026J04+          GTTATCTGGATCCCGAATACTATATGACTCAACAGTTAACCGAGAAAAGTGATGTGTACA
                      ____________________________________________________________
consensus             GTTATCTGGATCCCGAATACTATATGACTCAACAGTTAACCGAGAAAAGTGATGTGTACA
 
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rJMSF026J04+          GCTTTGGTGTTGTCATGCTTGAACTGATCACTGCCAAGCAACCAATTGAAAAGGGCAAGT
                      ____________________________________________________________
consensus             GCTTTGGTGTTGTCATGCTTGAACTGATCACTGCCAAGCAACCAATTGAAAAGGGCAAGT
 
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rJMSF026J04+          ACATTGTCCGGGAGGTGAGAACGATGATGAATAAGGACGATGAGGAACATTTCGGATTAA
                      ____________________________________________________________
consensus             ACATTGTCCGGGAGGTGAGAACGATGATGAATAAGGACGATGAGGAACATTTCGGATTAA
 
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rJMSF026J04+          GAAATATGATGGATCCTAGCATTAGAAACACAACCACAAACCTTTCAGGGTTCGGGAAGT
                      ____________________________________________________________
consensus             GAAATATGATGGATCCTAGCATTAGAAACACAACCACAAACCTTTCAGGGTTCGGGAAGT
 
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rJMSF026J04+          TCGTAGAGTTGGCAATGCAATGTGTGGAAGAATCAGCTGCTGACCGGCCAACAATGAGCG
                      ____________________________________________________________
consensus             TCGTAGAGTTGGCAATGCAATGTGTGGAAGAATCAGCTGCTGACCGGCCAACAATGAGCG
 
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rJMSF026J04+          AGGCGGTGAAGGCACTCGAAACCATCCTACAAAACGATGGGCTAAATACTAACTCCACAT
                      ____________________________________________________________
consensus             AGGCGGTGAAGGCACTCGAAACCATCCTACAAAACGATGGGCTAAATACTAACTCCACAT
 
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rJMSF006J08+                         CCACGGANTTTGGATCCTCTNAAGCTGCTCTCGCACACCCTTATT
rJMSF026J04+          CCGCGTCTTCCTCAGCCACGGACTTTGGATCCTCTAAAGCTGCTCTCGCACACCCTTATT
                      ____________________________________________________________
consensus             CCGCGTCTTCCTCAGCCACGGACTTTGGATCCTCTAAAGCTGCTCTCGCACACCCTTATT
 
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rJMSF006J08+          ATCACCNTGATGNTTTTCCAAGAAAGGAGATTCATGACAGTGGTGATGCCTTCGACTACA
rJMSF026J04+          ATCACCATGATGCTTTACCAAGAAAGGAGATTCATGACAGTGGTGATGCCTTCGACTACA
                      ____________________________________________________________
consensus             ATCACCATGATGCTTTTCCAAGAAAGGAGATTCATGACAGTGGTGATGCCTTCGACTACA
 
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rJMSF006J08+          GCGGGGGTTTCACACTTTCAGCAAAAGTCGAACCCAAATGATGATCCTAGCCCAGATGTT
rJMSF026J04+          GCGGGGGTTTCACACTTTCAGCAAAAGTCGAACCCAAATGATGATCCTAGCCCAGATGTT
                      ____________________________________________________________
consensus             GCGGGGGTTTCACACTTTCAGCAAAAGTCGAACCCAAATGATGATCCTAGCCCAGATGTT
 
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rJMSF006J08+          CTTCATTCCNTTCTNNTTATGTTCTTTAATNTATTCTTCCACAACTTGTGTCAATCCTTA
rJMSF026J04+          CTTCATTCCCTTCTTTTTATGTTCTTTAATTTATTCTTCCACAACTTGTGTCAATCCTTA
                      ____________________________________________________________
consensus             CTTCATTCCCTTCTTTTTATGTTCTTTAATTTATTCTTCCACAACTTGTGTCAATCCTTA
 
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rJMSF006J08+          CAAGACAGCTATATTTAGTGCCTTTATGGGACTTCAGTTGTCTAGGTTGTTGGGAAGAAC
rJMSF026J04+          CAAGACAGCTATATTTAGTGCCTTTATGGGACTTCAGTTGTCTAGGTTGTTGGGAAGAAC
                      ____________________________________________________________
consensus             CAAGACAGCTATATTTAGTGCCTTTATGGGACTTCAGTTGTCTAGGTTGTTGGGAAGAAC
 
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rJMSF006J08+          TACAAC                                                      
rJMSF026J04+          TACAACAGCTTGTCCTGATAAAGATGAATATATCAATTAGGGTTGATGATATATATGCTT
                      ____________________________________________________________
consensus             TACAACAGCTTGTCCTGATAAAGATGAATATATCAATTAGGGTTGATGATATATATGCTT