| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN013J10 | Sequence | 428 | 008544 (4) | ref|XP_009616257.1| | 2e-20 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like isofor | |||||
| JMFS059A10 | Sequence | 615 | 008544 (4) | ref|XP_011080858.1| | 3e-13 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like [Sesam | |||||
| JMSF026E06 | Sequence | 676 | 002426 (8) | emb|CDP09162.1| | 8e-46 | unnamed protein product [Coffea canephora] | 805 | 008544 (4) | ref|XP_009616257.1| | 3e-58 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like isofor |
| JMSF044O13 | Sequence | 700 | 002426 (8) | ref|XP_006344040.1| | 4e-51 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Solan | 657 | 008544 (4) | gb|EYU38475.1| | 6e-13 | hypothetical protein MIMGU_mgv1a002459mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
JMFS059A10+ ACTATATATATAAACCGAAATGTTGTGCCAAATGTTGGTGATATATTT
rJMSF044O13- GTTGGTGATATATTT
rJMSF026E06- GTTGGTGATATATTT
____________________________________________________________
consensus ACTATATATATAAACCGAAATGTTGTGCCAAATGTTGGTGATATATTT
. : . : . : . : . : . :
JMFS059A10+ TACACGTATAATCAGCGAATACTACATGTACAAGAAAAAGAAATCATCTTAGTAAAGTAC
rJMSF044O13- TACACGTATAATCAGCGAATACTACATGTACAAGAAAAAGAAATCATCTTAGTAAAGTAC
rJMSF026E06- TACACGTATAATCAGCGAATACTACATGTACAAGAAAAAGAAATCATCTTAGTAAAGTAC
____________________________________________________________
consensus TACACGTATAATCAGCGAATACTACATGTACAAGAAAAAGAAATCATCTTAGTAAAGTAC
. : . : . : . : . : . :
JMFS059A10+ CTGAGAAAATCAATCTCTTGCCTTCCCGTTAGACCCTTCAACCGTTGTCTTGAACTATTC
rJMSF044O13- CTGAGAAAATCAATCTCTTGCCTTCCCGTTAGACCCTTCAACCGTTGTCTTGAACTATTC
rJMSF026E06- CTGAGAAAATCAATCTCTTGCCTTCCCGTTAGACCCTTCAACCGTTGTCTTGAACTATTC
____________________________________________________________
consensus CTGAGAAAATCAATCTCTTGCCTTCCCGTTAGACCCTTCAACCGTTGTCTTGAACTATTC
. : . : . : . : . : . :
JMFS059A10+ AGATGATGACCATGGTTTACAAAAAAGCTCAGAGATTGATGTTAGGAGAAAAACAATTAC
rJMSF044O13- AGATGATGACCATGGTTTACAAAAAAGCTCAGAGATTGATGTTAGGAGAAAAACAATTAC
JMFN013J10+ AAAACAATTAC
rJMSF026E06- AGATGATGACCATGGTTTACAAAAAAGCTCAGAGATTGATGTTAGGAGAAAAACAATTAC
____________________________________________________________
consensus AGATGATGACCATGGTTTACAAAAAAGCTCAGAGATTGATGTTAGGAGAAAAACAATTAC
. : . : . : . : . : . :
JMFS059A10+ CCGGAAAGCTATACAGCGTGGAAGTGCTGCCACAAAGCACTGCCTGTCTTGCAGCATATT
rJMSF044O13- CCGGAAAGCTATACAGCGTGGAAGTGCTGCCACAAAGCACTGCCTGTCTTGCAGCATATT
JMFN013J10+ CCGGAAAGCTATACAGCGTGGAAGTGCTGCCACAAAGCACTGCCTGTCTTGCAGCATATT
rJMSF026E06- CCGGAAAGCTATACAGCGTGGAAGTGCTGCCACAAAGCACTGCCTGTCTTGCAGCATATT
____________________________________________________________
consensus CCGGAAAGCTATACAGCGTGGAAGTGCTGCCACAAAGCACTGCCTGTCTTGCAGCATATT
. : . : . : . : . : . :
JMFS059A10+ AGGTTTTTTTATCTGCTTAAAAACTAAGACGGTGTGCCAGAGTGGAACTTCCAAGTGTCA
rJMSF044O13- AGGTTTTTTTATCTGCTTAAAAACTAAGACGGTGTGCCAGAGTGGAACTTCCAAGTGTCA
JMFN013J10+ AGGTTTTTTTATCTGCTTAAAAACTAAGACGGTGTGCCAGAGTGGAACTTCCAAGTGTCA
rJMSF026E06- AGGTTTTTTTATCTGCTTAAAAACTAAGACGGTGTGCCAGAGTGGAACTTCCAAGTGTCA
____________________________________________________________
consensus AGGTTTTTTTATCTGCTTAAAAACTAAGACGGTGTGCCAGAGTGGAACTTCCAAGTGTCA
. : . : . : . : . : . :
JMFS059A10+ TTTGGCAAAAGCAAGTATAAACTGTCATCCAGAAGTCGGTTGCAGCGGAAGGATAGAACC
rJMSF044O13- TTTGGCAAAAGCAAGTATAAACTGTCATCCAGAAGTCGGTTGCAGCGGAAGGATAGAACC
JMFN013J10+ TTTGGCAAAAGCAAGTATAAACTGTCATCCAGAAGTCGGTTGCAGCGGAAGGATAGAACC
rJMSF026E06- TTTGGCAAAAGCAAGTATAAACTGTCATCCAGAAGTCGGTTGCAGCGGAAGGATAGAACC
____________________________________________________________
consensus TTTGGCAAAAGCAAGTATAAACTGTCATCCAGAAGTCGGTTGCAGCGGAAGGATAGAACC
. : . : . : . : . : . :
JMFS059A10+ TTGCTTGCCTCTGATGAAATATGTCAGTTCTGCTGGAGCAACAACCAACTTTAACCATTC
rJMSF044O13- TTGCTTGCCTCTGATGAAATATGTCAGTTCTGCTGGAGCAACAACCAACTTTAACCATTC
JMFN013J10+ TTGCTTGCCTCTGATGAAATATGTCAGTTCTGCTGGAGCAACAACCAACTTTAACCATTC
rJMSF026E06- TTGCTTGCCTCTGATGAAATATGTCAGTTCTGCTGGAGCAACAACCAACTTTAACCATTC
____________________________________________________________
consensus TTGCTTGCCTCTGATGAAATATGTCAGTTCTGCTGGAGCAACAACCAACTTTAACCATTC
. : . : . : . : . : . :
JMFS059A10+ TTGCAGTTCCTCGCCTTCAACCTTCTCTTTCTCTTCCAACCGTGCACCAAGCCCCTCCAG
rJMSF044O13- TTGCAGTTCCTCGCCTTCAACCTTCTCTTTCTCTTCCAACCGTGCACCAAGCCCCTCCAG
JMFN013J10+ TTGCAGTTCCTCGCCTTCAACCTTCTCTTTCTCTTCCAACCGTGCACCAAGCCCCTCCAG
rJMSF026E06- TTGCAGTTCCTCGCCTTCAACCTTCTCTTTCTCTTCCAACCGTGCACCAAGCCCCTCCAG
____________________________________________________________
consensus TTGCAGTTCCTCGCCTTCAACCTTCTCTTTCTCTTCCAACCGTGCACCAAGCCCCTCCAG
. : . : . : . : . : . :
JMFS059A10+ TACAGTGGGATTGGCACGCACAACAGCGAGTGCTACAACAAGTGCCGATTGTAGCAATGA
rJMSF044O13- TACAGTGGGATTGGCACGCACAACAGCGAGTGCTACAACAAGTGCCGATTGTAGCAATGA
JMFN013J10+ TACAGTGGGATTGGCACGCACAACAGCGAGTGCTACAACAAGTGCCGATTGTAGCAATGA
rJMSF026E06- TACAGTGGGATTGGCACGCACAACAGCGAGTGCTACAACAAGTGCCGATTGTAGCAATGA
____________________________________________________________
consensus TACAGTGGGATTGGCACGCACAACAGCGAGTGCTACAACAAGTGCCGATTGTAGCAATGA
. : . : . : . : . : . :
JMFS059A10+ TGTGACCTCTCTTTGAACAA
rJMSF044O13- TGTGACCTCTCTTTGAACAAAGATCAACAAGATGCCCCTGGTCCCTTCCCCAGGGCATGG
JMFN013J10+ TGTGACCTCTCTTTGAAC-AAGATCAACAAGATGCCCCTGGTCCCTTCCCCAGGGCAT
rJMSF026E06- TGTGACCTCTCTTTGAAC-AAGATCAACAAGATGCCCCTGGTCCCTTCCCCAGGGCATGG
____________________________________________________________
consensus TGTGACCTCTCTTTGAACAAAGATCAACAAGATGCCCCTGGTCCCTTCCCCAGGGCATGG
. : . : . : . : . : . :
rJMSF044O13- AA
rJMSF026E06- AACCTGCATCATCCATCCCACCACTAGAAAGAGTTGCCAATGAAACAGGACCTATGGTCT
____________________________________________________________
consensus AACCTGCATCATCCATCCCACCACTAGAAAGAGTTGCCAATGAAACAGGACCTATGGTCT
. : . : . : . : . : . :
rJMSF026E06- CATTAAGACCATATTCAGCGACTGCCTTGTAGGCCATGTCTGTTGCACGCCGTATATCAT
____________________________________________________________
consensus CATTAAGACCATATTCAGCGACTGCCTTGTAGGCCATGTCTGTTGCACGCCGTATATCAT
. : . : . : . : . : . :
rJMSF026E06- CAAGTGCACCAGTGGAAACACGTCCGGAGTACATAACTTCTNCTGCTGCACGTCCACCAA
____________________________________________________________
consensus CAAGTGCACCAGTGGAAACACGTCCGGAGTACATAACTTCTNCTGCTGCACGTCCACCAA