Contig 008543:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030G13+                                                      ACTCTGCGGTGCCGGT
                      ____________________________________________________________
consensus                                                         ACTCTGCGGTGCCGGT
 
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rJMSF030G13+          GAGGATACGGGTGGAGGAAAAGAACTCGTTAAACAACTGATTCAAGGTGGATCCGTTGAT
                      ____________________________________________________________
consensus             GAGGATACGGGTGGAGGAAAAGAACTCGTTAAACAACTGATTCAAGGTGGATCCGTTGAT
 
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rJMSF030G13+          AAAGACCCGAGCTGTCCTCGAGCTCGACGACGACATTATGATGACGTGCAACGACATTGA
rJMSF029B18+                                CTCGACGACGACATTATGATGACGTGCAACGACATTGA
                      ____________________________________________________________
consensus             AAAGACCCGAGCTGTCCTCGAGCTCGACGACGACATTATGATGACGTGCAACGACATTGA
 
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rJMSF030G13+          ACGAGGGTTTTTCATATGGCGTGAGCATCCGGATAGGATCGTCGGGTACTACCCCCGCCT
rJMSF029B18+          ACGAGGGTTTTTCATATGGCGTGAGCATCCGGATAGGATCGTCGGGTACTACCCCCGCCT
                      ____________________________________________________________
consensus             ACGAGGGTTTTTCATATGGCGTGAGCATCCGGATAGGATCGTCGGGTACTACCCCCGCCT
 
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rJMSF030G13+          CGCTAACGGGAGCCCGTTGAAGTACCGGGCCGAGAGACACGCTCGCAAGCACAACGGATA
rJMSF029B18+          CGCTAACGGGAGCCCGTTGAAGTACCGGGCCGAGAGACACGCTCGCAAGCACAACGGATA
rJMSF025K21+                      CCCGTTGAAGTACCGGGCCGAGAGACACGCTCGCAAGCACAACGGATA
                      ____________________________________________________________
consensus             CGCTAACGGGAGCCCGTTGAAGTACCGGGCCGAGAGACACGCTCGCAAGCACAACGGATA
 
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rJMSF030G13+          CAACATGATACTGACGGGGGCGGCGTTCATGGACGCCCAAACGGCTTTCGAGAGGTACTG
rJMSF029B18+          CAACATGATACTGACGGGGGCGGCGTTCATGGACGCCCAAACGGCTTTCGAGAGGTACTG
rJMSF025K21+          CAACATGATACTGACGGGGGCGGCGTTCATGGACGCCCAAACGGCTTTCGAGAGGTACTG
                      ____________________________________________________________
consensus             CAACATGATACTGACGGGGGCGGCGTTCATGGACGCCCAAACGGCTTTCGAGAGGTACTG
 
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rJMSF030G13+          GAGCAAGGAAGCTGCAGGCGGGAGGGAAGCCGTGGACAAGTTCTTTAACTGCGAGGACGT
rJMSF029B18+          GAGCAAGGAAGCTGCAGGCGGGAGGGAAGCCGTGGACAAGTTCTTTAACTGCGAGGACGT
rJMSF025K21+          GAGCAAGGAAGCTGCAGGCGGGAGGGAAGCCGTGGACAAGTTCTTTAACTGCGAGGACGT
                      ____________________________________________________________
consensus             GAGCAAGGAAGCTGCAGGCGGGAGGGAAGCCGTGGACAAGTTCTTTAACTGCGAGGACGT
 
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rJMSF030G13+          GCTACTGAACTACCTATACGCAAACGCGAGCTCTTCTTCTTCTTCTTCCAACACGGTCGA
rJMSF029B18+          GCTACTGAACTACCTATACGCAAACGCGAGCTCTTCTTCTTCTTCTTCCAACACGGTCGA
rJMSF025K21+          GCTACTGAACTACCTATACGCAAACGCGAGCTCTTCTTCTTCTTCTTCCAACACGGTCGA
                      ____________________________________________________________
consensus             GCTACTGAACTACCTATACGCAAACGCGAGCTCTTCTTCTTCTTCTTCCAACACGGTCGA
 
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rJMSF030G13+          ATACGTGAAACCTGCGTGGGCGATCGACATGTCGAAGTTCTCCGGTGTTGCAATCAGCGG
rJMSF029B18+          ATACGTGAAACCTGCGTGGGCGATCGACATGTCGAAGTTCTCCGGTGTTGCAATCAGCGG
rJMSF025K21+          ATACTTGAAACCTGCGTGGGCGATCGACATGTCGAAGTTCTCCGGTGTTGCAATCAGCGG
                      ____________________________________________________________
consensus             ATACGTGAAACCTGCGTGGGCGATCGACATGTCGAAGTTCTCCGGTGTTGCAATCAGCGG
 
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rJMSF030G13+          CAACACGCAAGCACACTACAAAGTGAGGAGCAAATGCCTCCGGAAGTTCTCGGAGATGTA
rJMSF029B18+          CAACACGCAAGCACACTACAAAGTGAGGAGCAAATGCCTCCGGAAGTTCTCGGAGATGTA
rJMSF025K21+          CAACACGCAAGCACACTACAAAGTGAGGAGCAAATGCCTCCGGAAGTTCTCGGAGATGTA
                      ____________________________________________________________
consensus             CAACACGCAAGCACACTACAAAGTGAGGAGCAAATGCCTCCGGAAGTTCTCGGAGATGTA
 
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rJMSF030G13+          CGGGAGCATAGCGGGCCGGAAATCGGAGTTTGGCAGCCGGATGGACGGCTGGGATGTATA
rJMSF029B18+          CGGGAGCATAGCGGGCCGGAAATCGGAGTTTGGCAGCCGGATGGACGGCTGGGATGTATA
rJMSF025K21+          CGGGAGCATAGCGGGCCGGAAATCGGAGTTTGGCAGCCGGATGGACGGCTGGGATGTATA
                      ____________________________________________________________
consensus             CGGGAGCATAGCGGGCCGGAAATCGGAGTTTGGCAGCCGGATGGACGGCTGGGATGTATA
 
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rJMSF030G13+          GCTTGTAAAACACCTTCTAACATCAGGTAGTAGCCAGTGGTTGTTAGTAGTATTATTATT
rJMSF029B18+          GCTTGTAAAACACCTTCTAACATCAGGTAGTAGCCAGTGGTTGTTAGTAGTATTATTATT
rJMSF025K21+          GCTTGTAAAACACCTTCTAACATCAGGTAGTAGCCAGTGGTTGTTAGTAGTATTATTATT
                      ____________________________________________________________
consensus             GCTTGTAAAACACCTTCTAACATCAGGTAGTAGCCAGTGGTTGTTAGTAGTATTATTATT
 
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rJMSF030G13+          GTTTTCTTGATATTCTTTGTTTTTGGTGGTATAAGTTTTTATGGTCTT            
rJMSF029B18+          GTTTTCTTGATATTCTTTGTTTTTGGTGGTATAAGTTTTTATGGTCTTTTAGCCTCTTTG
rJMSF025K21+          GTTTTCTTGATATTCTTTGTTTTTGGTGGTATAAGTTTTTATGGTCTTTTAGCCTCTTTG
                      ____________________________________________________________
consensus             GTTTTCTTGATATTCTTTGTTTTTGGTGGTATAAGTTTTTATGGTCTTTTAGCCTCTTTG
 
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rJMSF029B18+          TAGACTCTGCAATTCAATTTGACCTCCTGTTGTGAATTGTGTATT               
rJMSF025K21+          TAGACTCTGCAATTCAATTTGACCTCCTGTTGTGAATTGTGTATTTGTGTGTATGGGAGG
                      ____________________________________________________________
consensus             TAGACTCTGCAATTCAATTTGACCTCCTGTTGTGAATTGTGTATTTGTGTGTATGGGAGG
 
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rJMSF025K21+          AAGAGTTCAGATGTGGTTGTTGTGCTTCACCAAATATGCATTCCTTAGTCTTCTTTTTAA
                      ____________________________________________________________
consensus             AAGAGTTCAGATGTGGTTGTTGTGCTTCACCAAATATGCATTCCTTAGTCTTCTTTTTAA
 
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rJMSF025K21+          AAATTATTCGAGGATGGAAACTTGCAACCACTATCTGATGGTGAATTTGTGATCTTGTGT
                      ____________________________________________________________
consensus             AAATTATTCGAGGATGGAAACTTGCAACCACTATCTGATGGTGAATTTGTGATCTTGTGT
 
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rJMSF025K21+          TATACCATGTGGAATCGAATAGGAGAAGTAAATTACACTAGAAGATCTTATGTGATGGAC
                      ____________________________________________________________
consensus             TATACCATGTGGAATCGAATAGGAGAAGTAAATTACACTAGAAGATCTTATGTGATGGAC