Contig 008540:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036P06Sequence387000825 (3)emb|CDP07208.1|2e-60unnamed protein product [Coffea canephora]723008540 (3)ref|XP_008374098.1|1e-113PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]
JMSF025D01Sequence652000825 (3)emb|CDP07208.1|4e-140unnamed protein product [Coffea canephora]721008540 (3)ref|XP_008374098.1|7e-98PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]
JMSF031H13Sequence653000825 (3)emb|CDP07208.1|6e-126unnamed protein product [Coffea canephora]746008540 (3)ref|XP_008374098.1|7e-110PREDICTED: ABC transporter E family member 2-like isoform X1 [Malus domestica]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          TACTGTGAGACATTTGCTACATCAGAAAATACGTGATTCTTATACCCATCCTCAGTTTAA
rJMSF031H13+                       TTGCTACATCAGAAAATACGTGATTCTTATACCCATCCTCAGTTTAA
rJMSF025D01+                                                                     A
                      ____________________________________________________________
consensus             TACTGTGAGACATTTGCTACATCAGAAAATACGTGATTCTTATACCCATCCTCAGTTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          CTCAGATGTTATGAAGCCTCTGCAAATCGAGCAATTGATGGATCAAGAAGTCGTGAACTT
rJMSF031H13+          CTCAGATGTTATGAAGCCTCTGCAAATCGAGCAATTGATGGATCAAGAAGTCGTGAACTT
rJMSF025D01+          CTCAGATGTTATGAAGCNTCTGCAAATCGAGCAATTGATGGATCAAGAAGTCGTGAACTT
                      ____________________________________________________________
consensus             CTCAGATGTTATGAAGCCTCTGCAAATCGAGCAATTGATGGATCAAGAAGTCGTGAACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          ATCTGGTGGAGAGTTGCAAAGAGTTGCCTTGGTTTTGTGTCTTGGGAAGCCTGCCGATAT
rJMSF031H13+          ATCTGGTGGAGAGTTGCAAAGAGTTGCCTTGGTTTTGTGTCTTGGGAAGCCTGCCGATAT
rJMSF025D01+          ATCTGGTGGAGAGTTGCAAAGAGTTGCCTTGGTTTTGTGTCTTGGGAAGCCTGCCGATAT
                      ____________________________________________________________
consensus             ATCTGGTGGAGAGTTGCAAAGAGTTGCCTTGGTTTTGTGTCTTGGGAAGCCTGCCGATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          CTATTTAATTGATGAACCGAGCGCATATCTAGATTCTGAGCAGCGTATCGTCGCTTCGAA
rJMSF031H13+          CTATTTAATTGATGAACCGAGCGCATATCTAGATTCTGAGCAGCGTATCGTCGCTTCGAA
rJMSF025D01+          CTATTTAATTGATGAACCGAGCGCATATCTAGATTCTGAGCAGCGTATCGTCGCTTCGAA
                      ____________________________________________________________
consensus             CTATTTAATTGATGAACCGAGCGCATATCTAGATTCTGAGCAGCGTATCGTCGCTTCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          AGTTATAAAGAGGTTTATTCTTCATGCAAAGAAGACCGCGTTTGTGGTGGAACATGACTT
rJMSF031H13+          AGTTATAAAGAGGTTTATTCTTCATGCAAAGAAGACCGCGTTTGTGGTGGAACATGACTT
rJMSF025D01+          AGTTATAAAGAGGTTTATTCTTCATGCAAAGAAGACCGCGTTTGTGGTGGAACATGACTT
                      ____________________________________________________________
consensus             AGTTATAAAGAGGTTTATTCTTCATGCAAAGAAGACCGCGTTTGTGGTGGAACATGACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          CATAATGGCAACCTACTTGGCCGATAGAGTCATCGTGTATGAAGGGATGCCATCGGTGGA
rJMSF031H13+          CATAATGGCAACCTACTTGGCCGATAGAGTCATCGTGTATGAAGGGATGCCATCGGTGGA
rJMSF025D01+          CATAATGGCAACCTACTTGGCCGATAGAGTCATCGTGTATGAAGGGATGCCATCGGTGGA
                      ____________________________________________________________
consensus             CATAATGGCAACCTACTTGGCCGATAGAGTCATCGTGTATGAAGGGATGCCATCGGTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          TTGTATAGCAAATTCACCACAGTCATTGTTGACCGGAATGAACCTATTCTTATCTCACCT
rJMSF031H13+          TTGTATAGCAAATTCACCACAGTCATTGTTGACCGGAATGAACCTATTCTTATCTCACCT
rJMSF025D01+          TTGTATAGCAAATTCACCACAGTCATTGTTGACCGGAATGAACCTATTCTTATCTCACCT
                      ____________________________________________________________
consensus             TTGTATAGCAAATTCACCACAGTCATTGTTGACCGGAATGAACCTATTCTTATCTCACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          GGATATTACGTTTAGACGGGATCCAACTAATTATCGCCCAAGAATCAACAAACTGGAGTC
rJMSF031H13+          GGATATTACGTTTAGACGGGATCCAACTAATTATCGCCCAAGAATCAACAAACTGGAGTC
rJMSF025D01+          GGATATTACGTTTAGACGGGATCCAACTAATTATCGCCCAAGAATCAACAAACTGGAGTC
                      ____________________________________________________________
consensus             GGATATTACGTTTAGACGGGATCCAACTAATTATCGCCCAAGAATCAACAAACTGGAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036P06+          AACCAAGGACAGGGAGCAAAAGGCAGCAGGATCATACTATTACCTGGATGATT       
rJMSF031H13+          AACCAAGGACAGGGAGCAAAAGGCAGCAGGATCATACTATTACCTGGATGATT       
rJMSF025D01+          AACCAAGGACAGGGAGCAAAAGGCAGCAGGATCATACTATTACCTGGATGATTAAATGTA
                      ____________________________________________________________
consensus             AACCAAGGACAGGGAGCAAAAGGCAGCAGGATCATACTATTACCTGGATGATTAAATGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025D01+          ACTTTTAACACATGCCTCTTTTTACTGGCACCTTTGTTGAAGATGAAATGGTCTTTTGTG
                      ____________________________________________________________
consensus             ACTTTTAACACATGCCTCTTTTTACTGGCACCTTTGTTGAAGATGAAATGGTCTTTTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025D01+          TCCTCTGATTGTTATAGGTTTAAAGTTTTATTTAGTTTAGTACAATCACCGGGGGCCCTT
                      ____________________________________________________________
consensus             TCCTCTGATTGTTATAGGTTTAAAGTTTTATTTAGTTTAGTACAATCACCGGGGGCCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025D01+          ATGCGAAGAGAAGAGTAACGATTCAAAATCGCCTTTTCTGGGCCATTTTGTGCAAGTAAT
                      ____________________________________________________________
consensus             ATGCGAAGAGAAGAGTAACGATTCAAAATCGCCTTTTCTGGGCCATTTTGTGCAAGTAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025D01+          TTTGGGTAAGTTCTGCTTGTATTATTTTTACCTGACACAAAGAATGCCTTACACATACAC
                      ____________________________________________________________
consensus             TTTGGGTAAGTTCTGCTTGTATTATTTTTACCTGACACAAAGAATGCCTTACACATACAC