Contig 008539:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013C05Sequence568008539 (11)gb|AEC10957.1|1e-107ribosomal petrp-like protein [Camellia sinensis]695008539 (11)ref|XP_011071217.1|3e-109PREDICTED: 60S ribosomal protein L17-2 [Sesamum indicum]
JMFF018D21Sequence520008539 (11)gb|AEC10957.1|8e-106ribosomal petrp-like protein [Camellia sinensis]317008539 (11)gb|ACJ02347.1|2e-3160S ribosomal protein L17 [Vernicia fordii]
JMFS064B06Sequence519008539 (11)ref|XP_009337495.1|8e-62PREDICTED: 60S ribosomal protein L17-1 isoform X1 [Pyrus x bretschneideri]
JMSF021J07Sequence692008539 (11)gb|AEC10957.1|3e-109ribosomal petrp-like protein [Camellia sinensis]744008539 (11)emb|CDP21557.1|6e-109unnamed protein product [Coffea canephora]
JMSF024P05Sequence685008539 (11)gb|AEC10957.1|3e-109ribosomal petrp-like protein [Camellia sinensis]714008539 (11)gb|AEC10957.1|4e-109ribosomal petrp-like protein [Camellia sinensis]
JMSF043B13Sequence476008539 (11)gb|EYU42099.1|2e-107hypothetical protein MIMGU_mgv1a013753mg [Erythranthe guttata]600008539 (11)gb|AEC10957.1|2e-92ribosomal petrp-like protein [Camellia sinensis]

Alignment

This contig is upended


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JMFS064B06+                           AATGTAAAACAGTATATCATTTTTAACCTTAACATACAAAATTA
rJMSF043B13-                                                                AAATTA
rJMFF013C05-                                                                AAATTA
                      ____________________________________________________________
consensus                             AATGTAAAACAGTATATCATTTTTAACCTTAACATACAAAATTA
 
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JMFS064B06+           ACTCCATAATCTCTTCAGAAAATTTGAATAGTGACAATCCACTACCAATACAATTCTCAA
rJMSF043B13-          ACTCCATAATCTCTTCAGAAAATTTGAATAGTGACAATCCACTACCAATACAATTCTCAA
rJMFF013C05-          ACTCCATAATCTCTTCAGAAAATTTGAATAGTGACAATCCACTACCAATACAATTCTCAA
JMSF021J07+                                      ATAGTGACAATCCACTACCAATACAATTCTCAA
JMSF024P05+                                              AATCCACTACCAATACAATTCTCAA
rJMSF024P05-                TAATCTCTTCAGAAAATTTGAATAGTGACAATCCACTACCAATACAATTCTCAA
                      ____________________________________________________________
consensus             ACTCCATAATCTCTTCAGAAAATTTGAATAGTGACAATCCACTACCAATACAATTCTCAA
 
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rJMFF018D21-                                                                 ATATG
JMFS064B06+           CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
rJMSF043B13-          CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
rJMFF013C05-          CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
JMSF021J07+           CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
JMSF024P05+           CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
rJMSF024P05-          CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
                      ____________________________________________________________
consensus             CATAAAGTAGGGGATATGTAAGAAACACAGCTCTATCAAGGCTCAGGAACAACAAATATG
 
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rJMFF018D21-          GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGNGGTTGCTATTTGNGACTCAGGCTCCTTC
JMFS064B06+           GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
rJMSF043B13-          GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
rJMFF013C05-          GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
rJMSF021J07-                      TAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
JMSF021J07+           GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
JMSF024P05+           GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
JMFF013C05+                                         GTGGTTGCTATTTGTGACTCAGGCTCCTTC
rJMSF024P05-          GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
                      ____________________________________________________________
consensus             GAAAAGAAAGCCTAAGCCTTCCTGGATTTGGTGGTTGCTATTTGTGACTCAGGCTCCTTC
 
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rJMFF018D21-          NTGACAGGTTCTTCCTTCTCACAAAGGATTAACTCAATGTGGCAAGGGGAANACNTGTAA
JMFS064B06+           TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
rJMSF043B13-          TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
rJMFF013C05-          TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
JMSF043B13+                             TCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
rJMSF021J07-          TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
JMSF021J07+           TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
JMSF024P05+           TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
JMFF013C05+           TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
JMFF018D21+                           TCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
rJMSF024P05-          TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
                      ____________________________________________________________
consensus             TTGACAGGTTCTTCCTTCTCAGAAAGGATTAACTCAATGTGGCAAGGGGAAGACATGTAA
 
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rJMFF018D21-          AGGTTAATTCTTCCGTGANCACGGNATGTGCGCANCCTCTGCTTCTGGGCTTGGNTAACC
JMFS064B06+           GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
rJMSF043B13-          GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
rJMFF013C05-          GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
JMSF043B13+           GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
rJMSF021J07-          GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
JMSF021J07+           GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
JMSF024P05+           GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
JMFF013C05+           GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
JMFF018D21+           GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCAGCCTCTGCTTCTGGGCTTGGTTAACC
rJMSF024P05-          GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
                      ____________________________________________________________
consensus             GGGTTAATTCTTCCGTGAGCACGGTATGTGCGCCGCCTCTGCTTCTGGGCTTGGTTAACC
 
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rJMFF018D21-          TGGACGTGGGANATGTAAAGNGTATCCACATCNAGCCCTTTCACCTCANCATTGCTTTCA
JMFS064B06+           TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
rJMSF043B13-          TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
rJMFF013C05-          TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
JMSF043B13+           TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
rJMSF021J07-          TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
JMSF021J07+           TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
JMSF024P05+           TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
JMFF013C05+           TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
JMFF018D21+           TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
rJMSF024P05-          TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
                      ____________________________________________________________
consensus             TGGACGTGGGAGATGTAAAGTGTATCCACATCGAGCCCTTTCACCTCAGCATTGCTTTCA
 
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rJMFF018D21-          NCATTCTTGAGCANATCNAGAATGAACTTGGNAGATTTCACGNGCCACCTTCCCTGTCCA
JMFS064B06+           GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
rJMSF043B13-          GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
rJMFF013C05-          GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
JMSF043B13+           GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
rJMSF021J07-          GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
JMSF021J07+           GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
JMSF024P05+           GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
JMFF013C05+           GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
JMFF018D21+           GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
rJMSF024P05-          GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
                      ____________________________________________________________
consensus             GCATTCTTGAGCAAATCGAGAATGAACTTGGCAGATTTCACGGGCCACCTTCCCTGTCCA
 
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rJMFF018D21-          TTGGGATGCCTG                                                
JMFS064B06+           TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGG     
rJMSF043B13-          TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
rJMFF013C05-          TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
JMSF043B13+           TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
rJMSF021J07-          TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
JMSF021J07+           TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
JMSF024P05+           TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
JMFF013C05+           TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
JMFF018D21+           TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
rJMSF024P05-          TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
                      ____________________________________________________________
consensus             TTGGGATGCCTGTTCTTAGCCTGAGCAGTCCTTCCAACACCACGGCAGAAGCGGGTAAAG
 
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rJMSF043B13-          GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
rJMFF013C05-          GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
JMSF043B13+           GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
rJMSF021J07-          GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
JMSF021J07+           GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
JMSF024P05+           GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
JMFF013C05+           GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
JMFF018D21+           GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
rJMSF024P05-          GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
                      ____________________________________________________________
consensus             GGAATGGCCTGCTTGTGGGCCAAAACATCTTCTAGATACCTTTTAGCCTTTACCAAAGGA
 
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rJMSF043B13-          AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGA      
rJMFF013C05-          AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
JMSF043B13+           AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
rJMSF021J07-          AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
JMSF021J07+           AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
JMSF024P05+           AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
JMFF013C05+           AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
JMFF018D21+           AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
rJMSF024P05-          AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
                      ____________________________________________________________
consensus             AGCTTCCTGATAGCATGTGCTGTTTCCCTAGTGTTCTTGAAATGAACTCTGAGATCTGAG
 
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rJMFF013C05-          CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
JMSF043B13+           CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
rJMSF021J07-          CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
JMSF021J07+           CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
JMSF024P05+           CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
JMFF013C05+           CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
JMFF018D21+           CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
rJMSF024P05-          CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
                      ____________________________________________________________
consensus             CCCCTAGCTTTGCAGGATTTGGTGGGATTATCGGGCTCCCTCGAGTACTTCACCATGGCG
 
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rJMFF013C05-          CCTGCTGCTTCGGCTGCTGCTTCAG                                   
JMSF043B13+           CCTGCTGCTTCGGC                                              
rJMSF021J07-          CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCC         
JMSF021J07+           CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCCTGCTTTC  
JMSF024P05+           CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCCTGCTTTC  
JMFF013C05+           CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCCTGCTTTC  
JMFF018D21+           CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCCTGCT     
rJMSF024P05-          CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCCTGCTTTCCC
                      ____________________________________________________________
consensus             CCTGCTGCTTCGGCTGCTGCTTCAGAAGCGAGATTAGGGTTTGCTCCTTCCTGCTTTCCC