| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033M04 | Sequence | 570 | 008538 (10) | ref|XP_011083663.1| | 2e-86 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Sesamum indicum] | 725 | 008538 (10) | ref|XP_009771198.1| | 4e-96 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Nicotiana sylvestris] |
| JMFF047F16 | Sequence | 544 | 010198 (29) | ref|XP_009145122.1| | 3e-92 | PREDICTED: UDP-glucose 6-dehydrogenase 4-like [Brassica rapa] | 490 | 008538 (10) | ref|XP_004238283.1| | 3e-42 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Solanum lycopersicum] |
| JMFN009H10 | Sequence | 240 | 008538 (10) | ref|XP_011083663.1| | 6e-19 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Sesamum indicum] | |||||
| JMSF008P03 | Sequence | 310 | 008538 (10) | ref|XP_011083663.1| | 2e-28 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Sesamum indicum] | 734 | 008538 (10) | ref|XP_009612501.1| | 2e-123 | PREDICTED: gamma carbonic anhydrase 1, mitochondrial-like [Nicotiana tomentosif |
| JMSF024N17 | Sequence | 691 | 008538 (10) | ref|XP_011083663.1| | 1e-113 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Sesamum indicum] | 767 | 008538 (10) | ref|XP_009771198.1| | 5e-100 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Nicotiana sylvestris] |
| JMSF040D19 | Sequence | 670 | 008538 (10) | ref|XP_011083663.1| | 1e-109 | PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Sesamum indicum] | 899 | 008538 (10) | ref|XP_009612501.1| | 9e-132 | PREDICTED: gamma carbonic anhydrase 1, mitochondrial-like [Nicotiana tomentosif |
This contig is upended
. : . : . : . : . : . :
JMSF008P03- GGCCTGCATCCTCCTGACCTTACCCCAGGAGTATTGCTCTCTCT
JMSF040D19- GAGTATTGCTCTCTCT
JMFN009H10+ TCT
JMFF033M04- GAGTATTGCTCTCTCT
JMSF024N17- GAGTATTGCTCTCTCT
____________________________________________________________
consensus GGCCTGCATCCTCCTGACCTTACCCCAGGAGTATTGCTCTCTCT
. : . : . : . : . : . :
JMSF008P03- ATAGCCATCATCGCAAAATTCACTGAAGATCATCAAGAGCCGCACAGCAAGAAGACGAAG
JMSF040D19- ATAGCCATCATCGCAAAATTCACTGAAGATCATCAAGAGCCGCACAGCAAGAAGACGAAG
JMFN009H10+ ATAGCCATCATCGCAAAATTCACTGAAGATCATCAAGAGCCGCACAGCAAGAAGACGAAG
JMFF033M04- ATAGCCATCATCGCAAAATTCACTGAAGATCATCAAGAGCCGCACAGCAAGAAGACGAAG
JMSF024N17- ATAGCCATCATCGCAAAATTCACTGAAGATCATCAAGAGCCGCACAGCAAGAAGACGAAG
____________________________________________________________
consensus ATAGCCATCATCGCAAAATTCACTGAAGATCATCAAGAGCCGCACAGCAAGAAGACGAAG
. : . : . : . : . : . :
JMSF008P03- AAGAAGAGAACGAAATGGGAAGTCTAGGGAAAGCGATATACACACTAGGATCGCTGATTC
JMSF040D19- AAGAAGAGAACGAAATGGGAAGTCTAGGGAAAGCGATATACACACTAGGATCGCTGATTC
JMFN009H10+ AAGAAGAGAACGAAATGGGAAGTCTAGGGAAAGCGATATACACACTAGGATCGCTGATTC
JMFF033M04- AAGAAGAGAACGAAATGGGAAGTCTAGGGAAAGCGATATACACACTAGGATCGCTGATTC
JMSF024N17- AAGAAGAGAACGAAATGGGAAGTCTAGGGAAAGCGATATACACACTAGGATCGCTGATTC
____________________________________________________________
consensus AAGAAGAGAACGAAATGGGAAGTCTAGGGAAAGCGATATACACACTAGGATCGCTGATTC
. : . : . : . : . : . :
JMSF008P03- GAGGCTCCGGCAAAGCCCTTGATCGCATCGGCTGCGGCCTTCAAGGCAGCTACTACTTGT
JMSF040D19- GAGGCTCCGGCAAAGCCCTTGATCGCATCGGCTGCGGCCTTCAAGGCAGCTACTACTTGT
JMFN009H10+ GAGGCTCCGGCAAAGCCCTTGATCGCATCGGCTGCGGCCTTCAAGGCAGCTACTACTTGT
JMFF033M04- GAGGCTCCGGCAAAGCCCTTGATCGCATCGGCTGCGGCCTTCAAGGCAGCTACTACTTGT
JMSF024N17- GAGGCTCCGGCAAAGCCCTTGATCGCATCGGCTGCGGCCTTCAAGGCAGCTACTACTTGT
____________________________________________________________
consensus GAGGCTCCGGCAAAGCCCTTGATCGCATCGGCTGCGGCCTTCAAGGCAGCTACTACTTGT
. : . : . : . : . : . :
JMSF008P03- CGGAACAGCTGTCCAGGCACCGAACTCTTATGGACCTATTTGACAAATCCCCTGTTGTTG
JMSF040D19- CGGAACAGCTGTCCAGGCACCGAACTCTTATGGACCTATTTGACAAATCCCCTGTTGTTG
JMFN009H10+ CGGAACAGCTGTCCAGGCACCGAACTCTTATGGACCTATTTGACAA
JMFF033M04- CGGAACAGCTGTCCAGGCACCGAACTCTTATGGACCTATTTGACAAATCCCCTGTTGTTG
JMSF024N17- CGGAACAGCTGTCCAGGCACCGAACTCTTATGGACCTATTTGACAAATCCCCTGTTGTTG
rJMSF040D19+ G
____________________________________________________________
consensus CGGAACAGCTGTCCAGGCACCGAACTCTTATGGACCTATTTGACAAATCCCCTGTTGTTG
. : . : . : . : . : . :
JMSF008P03- ACAAAGACGCATTTGTAGCACCAGGT
JMSF040D19- ACAAAGACGCATTTGTAGCACCAGGTGCCTCAGTAATTGGCGATGTCCAAGTGGGAAGAA
JMFF033M04- ACAAAGACGCATTTGTAGCACCAGGTGCCTCAGTAATTGGCGATGTCCAAGTGGGAAGAA
JMSF024N17- ACAAAGACGCATTTGTAGCACCAGGTGCCTCAGTAATTGGCGATGTCCAAGTGGGAAGAA
rJMSF008P03+ GGCGATGTCCAAGTGGGAAGAA
rJMSF040D19+ ACAAAGACGCATTTGTAGCCCCAGGTGCCTCAGTAATTGGCGATGTCCAAGTGGGAAGAA
____________________________________________________________
consensus ACAAAGACGCATTTGTAGCACCAGGTGCCTCAGTAATTGGCGATGTCCAAGTGGGAAGAA
. : . : . : . : . : . :
JMSF040D19- ATTCATCTATTTGGTATGGATGTGTATTGAGAGGTGATGTGAACAGAATTCGTGTTGGAG
JMFF033M04- ATTCATCTATTTGGTATGGATGTGTATTGAGAGGTGATGTGAACAGAATTCGTGTTGGAG
JMSF024N17- ATTCATCTATTTGGTATGGATGTGTATTGAGAGGTGATGTGAACAGAATTCGTGTTGGAG
rJMSF008P03+ ATTCATCTATTTGGTATGGATGTGTATTGAGAGGTGATGTGAACAGAATTCGTGTTGGAG
rJMSF040D19+ ATTCATCTATTTGGTATGGATGTGTATTGAGAGGTGATGTGAACAGAATTCGTGTTGGAG
____________________________________________________________
consensus ATTCATCTATTTGGTATGGATGTGTATTGAGAGGTGATGTGAACAGAATTCGTGTTGGAG
. : . : . : . : . : . :
JMSF040D19- CTGGAACCAACATACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
JMFF033M04- CTGGAACCAACATACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
JMSF024N17- CTGGAACCAACATACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
rJMSF008P03+ CTGGAACCAACATACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
rJMFF033M04+ TCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
rJMSF040D19+ CTGGAACCAACATACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
rJMSF024N17+ ACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
____________________________________________________________
consensus CTGGAACCAACATACAGGACAACTCCCTCGTTCATGTGGCAAAATTAAATTCGGGTGGCA
. : . : . : . : . : . :
JMSF040D19- GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
JMFF033M04- GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
JMSF024N17- GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
rJMSF008P03+ GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
rJMFF033M04+ GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
rJMSF040D19+ GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
rJMSF024N17+ GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
____________________________________________________________
consensus GGGATCTACCGACTATTATTGGGGACAATGTTACCATTGGGCATAGTGCGGTTATACATG
. : . : . : . : . : . :
JMSF040D19- CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
JMFF033M04- CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
JMSF024N17- CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
rJMSF008P03+ CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
rJMFF033M04+ CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
rJMSF040D19+ CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
rJMSF024N17+ CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
____________________________________________________________
consensus CCTGCACTATTGATGATGAGGCATTTGTTGGTATGGGAGCAATATTGCTCGATGGTGTCC
. : . : . : . : . : . :
JMSF040D19- ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
JMFF033M04- ATCTCGGGAAAC
JMSF024N17- ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
rJMSF008P03+ ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
rJMFF033M04+ ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
rJMSF040D19+ ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
rJMSF024N17+ ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
____________________________________________________________
consensus ATCTCGGGAAACATGCGATGGTTGCTGCAGGAGCCCTCGTGAGACAGAACACTAAAATTC
. : . : . : . : . : . :
JMSF040D19- CCTCGGGAGAGATATGGGCCGGTAATCCAGCCNAGTTCCTGAGAAAGCTAA
JMSF024N17- CCTCGGGAGAGATATGGGCCGGTAATCCAGCCNAGTTCCTGAGAAAGCTAACCGAGGAAG
rJMSF008P03+ CCTCGGGAGAGATATGGGCCGGTAATCCAGCCAAGTTCCTGAGAAAGCTAACCGAGGAAG
rJMFF033M04+ CCTCGGGAGAGATATGGGCCGGTAATCCAGCCAAGTTCCTGAGAAAGCTAACCGAGGAAG
rJMFF047F16+ AGAAAGCTAACCGAGGAAG
rJMSF040D19+ CCTCGGGAGAGATATGGGCCGGTAATCCAGCCAAGTTCCTGAGAAAGCTAACCGAGGAAG
rJMSF024N17+ CCTCGGGAGAGATATGGGCCGGTAATCCAGCCAAGTTCCTGAGAAAGCTAACCGAGGAAG
____________________________________________________________
consensus CCTCGGGAGAGATATGGGCCGGTAATCCAGCCAAGTTCCTGAGAAAGCTAACCGAGGAAG
. : . : . : . : . : . :
JMSF024N17- ANGTAGCCTTCA
rJMSF008P03+ AGGTAGCCTTCATATCTCAATCGGCCACAACTTACACCAACCTTGCACGAGTCCATGCAG
rJMFF033M04+ AGGTAGCCTTCATATCTCAATCGGCCACAACTTACACCAACCTTGCACGAGTCCATGCAG
rJMFF047F16+ AGGTAGCCTTCATATCTCAATCGGCCACAACTTACACCAACCTTGCACGAGTCCATGCAG
rJMSF040D19+ AGGTAGCCTTCATATCTCAATCGGCCACAACTTACACCAACCTTGCACGAGTCCATGCAG
rJMSF024N17+ AGGTAGCCTTCATATCTCAATCGGCCACAACTTACACCAACCTTGCACGAGTCCATGCAG
____________________________________________________________
consensus AGGTAGCCTTCATATCTCAATCGGCCACAACTTACACCAACCTTGCACGAGTCCATGCAG
. : . : . : . : . : . :
rJMSF008P03+ CTGAGAACTCGAAATCCTTTGACGAAATTGAATTCGAGAGGATGCTCCGCAAGAAGTACG
rJMFF033M04+ CTGAGAACTCGAAATCCTTTGACGAAATTGAATTCGAGAGGATGCTCCGCAAGAAGTACG
rJMFF047F16+ CTGAGAACTCGAAATCCTTTGACGAAATTGAATTCGAGAGGATGCTCCGCAAGAAGTACG
rJMSF040D19+ CTGAGAACTCGAAATCCTTTGACGAAATTGAATTCGAGAGGATGCTCCGCAAGAAGTACG
rJMSF024N17+ CTGAGAACTCGAAATCCTTTGACGAAATTGAATTCGAGAGGATGCTCCGCAAGAAGTACG
____________________________________________________________
consensus CTGAGAACTCGAAATCCTTTGACGAAATTGAATTCGAGAGGATGCTCCGCAAGAAGTACG
. : . : . : . : . : . :
rJMSF008P03+ CCCGACGTGACGAGGACTACGACTCGATGATTGGCGTCGTGCGTGAAACTCCCCCAGAAC
rJMFF033M04+ CCCGACGTGACGAGGACTACGACTCGATGATTGGCGTCGTGCGTGAAACTCCCCCAGAAC
rJMFF047F16+ CCCGACGTGACGAGGACTACGACTCGATGATTGGCGTCGTGCGTGAAACTCCCCCAGAAC
rJMSF040D19+ CCCGACGTGACGAGGACTACGACTCGATGATTGGCGTCGTGCGTGAAACTCCCCCAGAAC
rJMSF024N17+ CCCGACGTGACGAGGACTACGACTCGATGATTGGCGTCGTGCGTGAAACTCCCCCAGAAC
____________________________________________________________
consensus CCCGACGTGACGAGGACTACGACTCGATGATTGGCGTCGTGCGTGAAACTCCCCCAGAAC
. : . : . : . : . : . :
rJMSF008P03+ TTGTTCTTCCTGATAACATTCTGCCCGATAAAGCCAAGAGCTCCAACGAGGTGTACGTAA
rJMFF033M04+ TTGTTCTTCCTGATAACATTCTGCCCGATAAAGCCAAGAGCTCCAACGAGGTGTACGTAA
rJMFF047F16+ TTGTTCTTCCTGATAACATTCTGCCCGATAAAGCCAAGAGCTCCAACGAGGTGTACGTAA
rJMSF040D19+ TTGTTCTTCCTGATAACATTCTGCCCGATAAAGCCAAGAGCTCCAACGAGGTGTACGTAA
rJMSF024N17+ TTGTTCTTCCTGATAACATTCTGCCCGATAAAGCCAAGAGCTCCAACGAGGTGTACGTAA
____________________________________________________________
consensus TTGTTCTTCCTGATAACATTCTGCCCGATAAAGCCAAGAGCTCCAACGAGGTGTACGTAA
. : . : . : . : . : . :
rJMSF008P03+ GGTAGCCTTTCCCTCTTTGCTTGTTTAGGAGTTACGTTGGTGGGTGGAGACTGGCATATA
rJMFF033M04+ GGTAGCCTTTCCCTCTTTGCTTGTTTAGGAGTTACGTTGGTGGGTGGAGACTGGCATATA
rJMFF047F16+ GGTAGCCTTTCCCTCTTTGCTTGTTTAGGAGTTACGTTGGTGGGTGGAGACTGGCATATA
rJMSF040D19+ GGTAGCCTTTCCCTCTTTGCTTGTTTAGGAGTTACGTTGGTGGGTGGAGACTGGCATATA
rJMSF024N17+ GGTAGCCTTTCCCTCTTTGCTTGTTTAGGAGTTACGTTGGTGGGTGGAGACTGGCATATA
____________________________________________________________
consensus GGTAGCCTTTCCCTCTTTGCTTGTTTAGGAGTTACGTTGGTGGGTGGAGACTGGCATATA
. : . : . : . : . : . :
rJMSF008P03+ TTTCATCCGTCCCTGGATAATAATACCCAACTTAATGCTTTCTTCTTTTCCA
rJMFF033M04+ TTTCATCCGTCCCTGGATAATAATACCCAACTTAATGCTTTCTTCTTTTCCATGGCTTTC
rJMFF047F16+ TTTCATCCGTCCCTGGATAATAATACCCAACTTAATGCTTTCTTCTTTTCCATGGCTTTC
rJMSF040D19+ TTTCATCCGTCCCTGGATAATAATACCCAACTTAATGCTTTCTTCTTTTCCATGGCTTTC
rJMSF024N17+ TTTCATCCGTCCCTGGATAATAATACCCAACTTAATGCTTTCTTCTTTTCCATGGCTTTC
____________________________________________________________
consensus TTTCATCCGTCCCTGGATAATAATACCCAACTTAATGCTTTCTTCTTTTCCATGGCTTTC
. : . : . : . : . : . :
rJMFF033M04+ AAGAAACTCGTGTTTTTCAGAGGGAGATGACTGCTGTTATTAACCAATATATACATGAGA
rJMFF047F16+ AAGAAACTCGTGTTTTTCAGAGGGAGATGACTGCTGTTATTAACCAATATATACATGAGA
rJMSF040D19+ AAGAAACTCGTGTTTTTCAGAGGGAGATGACTGCTGTTATTAACCAATATATACATGAGA
rJMSF024N17+ AAGAAACTCGTGTTTTTCAGAGGGAGATGACTGCTGTTATTAACCAATATATACATGAGA
____________________________________________________________
consensus AAGAAACTCGTGTTTTTCAGAGGGAGATGACTGCTGTTATTAACCAATATATACATGAGA
. : . : . : . : . : . :
rJMFF033M04+ ATACTTTCCCCATTTTTCTCCTTATACAATTG
rJMFF047F16+ ATACTTTCCCCATTTTTCTCCTTATACAATTGATGAATTGAAGT
rJMSF040D19+ ATACTTTCGCCATTTTTCTCCTTATACAATTGATGAATTGAAGTAGG
rJMSF024N17+ ATACTTTCGCCATTTTTCTCCTTATACAATTGATGAATTGAAGTAGGTGAATTGTACTTG
____________________________________________________________
consensus ATACTTTCGCCATTTTTCTCCTTATACAATTGATGAATTGAAGTAGGTGAATTGTACTTG