Contig 008536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023G11Sequence627003958 (6)ref|XP_009778271.1|2e-49PREDICTED: autophagy-related protein 18a [Nicotiana sylvestris]724008536 (3)ref|XP_009778271.1|5e-86PREDICTED: autophagy-related protein 18a [Nicotiana sylvestris]
JMSF024G11Sequence141003958 (6)357008536 (3)ref|XP_009629097.1|3e-53PREDICTED: autophagy-related protein 18a [Nicotiana tomentosiformis]
JMSF042M08Sequence702003958 (6)ref|XP_009778271.1|2e-56PREDICTED: autophagy-related protein 18a [Nicotiana sylvestris]736008536 (3)ref|XP_009778271.1|5e-86PREDICTED: autophagy-related protein 18a [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042M08+ CAGAAGGGGCAAGTTAGGGTTGAACATTATGCTTCCAAGAAAACCAAGTTTATTATG
                      ____________________________________________________________
consensus CAGAAGGGGCAAGTTAGGGTTGAACATTATGCTTCCAAGAAAACCAAGTTTATTATG
 
. : . : . : . : . : . :
rJMSF023G11+ TTTTGCACTCACAAACGATGGGAAGATGCTTGCAACT
rJMSF042M08+ GCACACTCCTCCAGGATAGCCTGTTTTGCACTCACAAACGATGGGAAGATGCTTGCAACT
                      ____________________________________________________________
consensus GCACACTCCTCCAGGATAGCCTGTTTTGCACTCACAAACGATGGGAAGATGCTTGCAACT
 
. : . : . : . : . : . :
rJMSF023G11+ GCAAGCAGTAAAGGGACTCTCGTCAGAGTGTTCAATACTTTTGAAGGATCAATGTTGCAA
rJMSF042M08+ GCAAGCAGTAAAGGGACTCTCGTCAGAGTGTTCAATACTTTTGAAGGATCAATGTTGCAA
                      ____________________________________________________________
consensus GCAAGCAGTAAAGGGACTCTCGTCAGAGTGTTCAATACTTTTGAAGGATCAATGTTGCAA
 
. : . : . : . : . : . :
rJMSF023G11+ GAGGTTAGGAGAGGTGCAGACAGGGCAGAGATTTAGTCTTGCTTTTAATTCAACTGCCCA
rJMSF042M08+ GAGGTTAGGAGAGGTGCAGACAGGGCAGAGATTTAGTCTTGCTTTTAATTCAACTGCCCA
                      ____________________________________________________________
consensus GAGGTTAGGAGAGGTGCAGACAGGGCAGAGATTTAGTCTTGCTTTTAATTCAACTGCCCA
 
. : . : . : . : . : . :
rJMSF023G11+ CTGGCTAGCTGTTTCAAGTGATAAAGGAACCGTTCATGTGTTTAGCCTAAAGGCTGATTT
rJMSF042M08+ CTGGCTAGCTGTTTCAAGTGATAAAGGAACCGTTCATGTGTTTAGCCTAAAGGCTGATTT
rJMSF024G11+ GCTAGCTGTNTCAAGTGATAAAGGAACCGTTCATGTGTTTAGCCTAAAGGCTGNTTT
                      ____________________________________________________________
consensus CTGGCTAGCTGTTTCAAGTGATAAAGGAACCGTTCATGTGTTTAGCCTAAAGGCTGATTT
 
. : . : . : . : . : . :
rJMSF023G11+ AGAATCAACAGGAGTTGAGAAAGCTCATGATCCATCTGAAACGAAAGAAACTACTTCACC
rJMSF042M08+ AGAATCAACAGGAGTTGAGAAAGCTCATGATCCATCTGAAACGAAAGAAACTACTTCACC
rJMSF024G11+ AGAATCANCAGGAGTTGAGAAAGCTCATGATCCATNTGAAACGAAAGAAACTACTTCACC
                      ____________________________________________________________
consensus AGAATCAACAGGAGTTGAGAAAGCTCATGATCCATCTGAAACGAAAGAAACTACTTCACC
 
. : . : . : . : . : . :
rJMSF023G11+ AGGTGTTTCACAGCTCTCCTTCATCAAAGGTGTGCTACCAAAATATTTCAGTTCCGAGTG
rJMSF042M08+ AGGTGTTTCACAGCTCTCCTTCATCAAAGGTGTGCTACCAAAATATTTCAGTTCCGAGTG
rJMSF024G11+ AGGNGTNTCACAGCTNTCNTTCATCAAAGGTGTGCNACCAAAATATTTCAGTTCCGAGTG
                      ____________________________________________________________
consensus AGGTGTTTCACAGCTCTCCTTCATCAAAGGTGTGCTACCAAAATATTTCAGTTCCGAGTG
 
. : . : . : . : . : . :
rJMSF023G11+ GTCTGTTGCCCAGTTCCGCTTGCAAGAAGGTTTGCAGCATATTGTTGCCTTTGGCCACCA
rJMSF042M08+ GTCTGTTGCCCAGTTCCGCTTGCAAGAAGGTTTGCAGCATATTGTTGCCTTTGGCCACCA
rJMSF024G11+ GTCTGTNGCCCAGTTCCGCTTGCAAGAAGGTTTGCAGCATATGGTTGCCTTTGGCCACCA
                      ____________________________________________________________
consensus GTCTGTTGCCCAGTTCCGCTTGCAAGAAGGTTTGCAGCATATTGTTGCCTTTGGCCACCA
 
. : . : . : . : . : . :
rJMSF023G11+ AAAGAATACCATTGTGATACTTGGCATGGATGGCAGTTTCTACAGATGCCAGTTCAATGC
rJMSF042M08+ AAAGAATACCATTGTGATACTTGGCATGGATGGCAGTTTCTACAGATGCCAGTTCAATGC
rJMSF024G11+ AAAGAATACCATTGTGATACTTGGCATGGATGGCAGTTTCTACAGATGCCAGTTCAATGC
                      ____________________________________________________________
consensus AAAGAATACCATTGTGATACTTGGCATGGATGGCAGTTTCTACAGATGCCAGTTCAATGC
 
. : . : . : . : . : . :
rJMSF023G11+ AGCAGAAGGTGGGGAGATGAGACTTCTTGAACATCA
rJMSF042M08+ AGCAGAAGGTGGGGAGATGAGACTTCTTGAACATCA
rJMSF024G11+ AGCAGAAGGTGGGGAGATGAGACTTCTTGAACATCACAACTTCTTGAAGCCTGAGGATAA
                      ____________________________________________________________
consensus AGCAGAAGGTGGGGAGATGAGACTTCTTGAACATCACAACTTCTTGAAGCCTGAGGATAA