Contig 008535:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024F01Sequence697008535 (2)ref|XP_009603778.1|9e-132PREDICTED: serine/threonine-protein kinase Aurora-3-like [Nicotiana tomentosifo672008535 (2)gb|KJB24646.1|1e-117hypothetical protein B456_004G155300 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF024F01-                                                                  GCTAG
                      ____________________________________________________________
consensus                                                                    GCTAG
 
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JMSF024F01-           ACCTTCAAATTCAACTACCAGATAGATAGAAATGACTTCCAGAGCACAAAATCAACTCCA
                      ____________________________________________________________
consensus             ACCTTCAAATTCAACTACCAGATAGATAGAAATGACTTCCAGAGCACAAAATCAACTCCA
 
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JMSF024F01-           AAAACCCCCCAAGCAGCCTCCGAGGATCCTCAAAAAGCAATGGTCCATCGACGATTTCGA
                      ____________________________________________________________
consensus             AAAACCCCCCAAGCAGCCTCCGAGGATCCTCAAAAAGCAATGGTCCATCGACGATTTCGA
 
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JMSF024F01-           GATCGGGAAACCCCTCGGAAGGGGCAAATTCGGCCGCGTCTATCTCGCCCGTGAAATCAA
                      ____________________________________________________________
consensus             GATCGGGAAACCCCTCGGAAGGGGCAAATTCGGCCGCGTCTATCTCGCCCGTGAAATCAA
 
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JMSF024F01-           GAGCAAGTATGTAGTGGCATTGAAGATAATTTTTAAAGAGCAAATAGAGAAGTACAGGCT
                      ____________________________________________________________
consensus             GAGCAAGTATGTAGTGGCATTGAAGATAATTTTTAAAGAGCAAATAGAGAAGTACAGGCT
 
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JMSF024F01-           GCATCATCAGCTGAGAAGGGAGTTGGAGATTCAGAGCAGTCTTCGCCACCCGAATGTTCT
                      ____________________________________________________________
consensus             GCATCATCAGCTGAGAAGGGAGTTGGAGATTCAGAGCAGTCTTCGCCACCCGAATGTTCT
 
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JMSF024F01-           TCGGCTCTTCGGCTGGTTCCATGACGACGAGAGGATTTTCCTGATCTTGGAGTATGCTCA
rJMSF024F01+                                                          GGAGTATGCTCA
                      ____________________________________________________________
consensus             TCGGCTCTTCGGCTGGTTCCATGACGACGAGAGGATTTTCCTGATCTTGGAGTATGCTCA
 
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JMSF024F01-           CGGCGGCGAGCTCTACAAGGAACTCCGCAAATCCGGAACCTTTTCTGAAGAACAAGCCGC
rJMSF024F01+          CGGCGGCGAGCTCTACAAGGAACTCCGCAAATCCGGAACCTTTTCTGAAGAACAAGCCGC
                      ____________________________________________________________
consensus             CGGCGGCGAGCTCTACAAGGAACTCCGCAAATCCGGAACCTTTTCTGAAGAACAAGCCGC
 
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JMSF024F01-           CACTTATATTTCAAGCCTTACTCAAGCACTGGCCTATTGCCACGAGAAACATGTGATTCA
rJMSF024F01+          CACTTATATTTCAAGCCTTACTCAAGCACTGGCCTATTGCCACGAGAAACATGTGATTCA
                      ____________________________________________________________
consensus             CACTTATATTTCAAGCCTTACTCAAGCACTGGCCTATTGCCACGAGAAACATGTGATTCA
 
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JMSF024F01-           CAGGGACATAAAGCCTGAAAACCTGTTGCTGGACCATGAGGGCCGATTGAAGATTGGAGA
rJMSF024F01+          CAGGGACATAAAGCCTGAAAACCTGTTGCTGGACCATGAGGGCCGATTGAAGATTGGAGA
                      ____________________________________________________________
consensus             CAGGGACATAAAGCCTGAAAACCTGTTGCTGGACCATGAGGGCCGATTGAAGATTGGAGA
 
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JMSF024F01-           CTTTGGGTGGTCAGTACAATCGAGAAGCAAGAGACATACAATGTGTGGAACTTTGGACTA
rJMSF024F01+          CTTTGGGTGGTCAGTACAATCGAGAAGCAAGAGACATACAATGTGTGGAACTTTGGACTA
                      ____________________________________________________________
consensus             CTTTGGGTGGTCAGTACAATCGAGAAGCAAGAGACATACAATGTGTGGAACTTTGGACTA
 
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JMSF024F01-           CTTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCT
rJMSF024F01+          CTTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCT
                      ____________________________________________________________
consensus             CTTGGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCT
 
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JMSF024F01-           AGGTATTCTTTGCTATGAGTTTCTGTATGGTA                            
rJMSF024F01+          AGGTATTCTTTGCTATGAGTTTCTGTATGGTATGCCCCCATTTGAGGCAGAAAGCCAGAA
                      ____________________________________________________________
consensus             AGGTATTCTTTGCTATGAGTTTCTGTATGGTATGCCCCCATTTGAGGCAGAAAGCCAGAA
 
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rJMSF024F01+          AGATACCTTTAGAAGGATTATGAGGGTCGACCTCAACTTTCCCTCCACTCCTCGGGTCTC
                      ____________________________________________________________
consensus             AGATACCTTTAGAAGGATTATGAGGGTCGACCTCAACTTTCCCTCCACTCCTCGGGTCTC
 
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rJMSF024F01+          TGCAGAAGCAAAGAATCTCATTATTCGTCTTCTGGTGAAGGACTCTTCAAAAAGGCTGTC
                      ____________________________________________________________
consensus             TGCAGAAGCAAAGAATCTCATTATTCGTCTTCTGGTGAAGGACTCTTCAAAAAGGCTGTC
 
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rJMSF024F01+          TCTTGGAAAGATCATGGATCATCCTTGGATAATAAAGAATGCTAATCCCATCGGAGCATG
                      ____________________________________________________________
consensus             TCTTGGAAAGATCATGGATCATCCTTGGATAATAAAGAATGCTAATCCCATCGGAGCATG
 
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rJMSF024F01+          CTGGAATTGAGATCATGGTTCAAGATAGTGAAGGATATTAATCATTTTGCTTGTAAATAC
                      ____________________________________________________________
consensus             CTGGAATTGAGATCATGGTTCAAGATAGTGAAGGATATTAATCATTTTGCTTGTAAATAC
 
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rJMSF024F01+          ATGTCATATATCAAGGCACTAAACCAAAGGGATTTATCTTGATTCCATTTGCCAATTGAT
                      ____________________________________________________________
consensus             ATGTCATATATCAAGGCACTAAACCAAAGGGATTTATCTTGATTCCATTTGCCAATTGAT