Contig 008534:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002F22Sequence271012201 (25)ref|XP_006340788.1|1e-15PREDICTED: phospholipase D delta-like [Solanum tuberosum]755008534 (5)ref|XP_006340788.1|3e-76PREDICTED: phospholipase D delta-like [Solanum tuberosum]
JMSF024E14Sequence635012201 (25)ref|XP_006340788.1|2e-77PREDICTED: phospholipase D delta-like [Solanum tuberosum]776008534 (5)ref|XP_006340788.1|2e-78PREDICTED: phospholipase D delta-like [Solanum tuberosum]
JMSF027L19Sequence635012201 (25)ref|XP_006340788.1|2e-77PREDICTED: phospholipase D delta-like [Solanum tuberosum]704008534 (5)ref|XP_009788033.1|9e-91PREDICTED: phospholipase D delta-like isoform X2 [Nicotiana sylvestris]
JMSF028E04Sequence672012201 (25)ref|XP_004232528.1|1e-84PREDICTED: phospholipase D delta [Solanum lycopersicum]750008534 (5)ref|XP_009788033.1|3e-93PREDICTED: phospholipase D delta-like isoform X2 [Nicotiana sylvestris]
JMSF052C23Sequence599012201 (25)ref|XP_006340788.1|6e-32PREDICTED: phospholipase D delta-like [Solanum tuberosum]952008534 (5)ref|XP_006340788.1|6e-141PREDICTED: phospholipase D delta-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF052C23+                                                                    GA
                      ____________________________________________________________
consensus                                                                       GA
 
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rJMSF052C23+          TCCCAATGGAGTTGGCACTAAAAGTTGTTAGTAAAATTAGAGCCAAGGAACAATTTGCTG
                      ____________________________________________________________
consensus             TCCCAATGGAGTTGGCACTAAAAGTTGTTAGTAAAATTAGAGCCAAGGAACAATTTGCTG
 
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rJMSF052C23+          TATATGTAGTTGTGCCAATGTGGCCTGAAGGGGACCCCAAGTCGGCTACCGTGCAAGAAA
                      ____________________________________________________________
consensus             TATATGTAGTTGTGCCAATGTGGCCTGAAGGGGACCCCAAGTCGGCTACCGTGCAAGAAA
 
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rJMSF052C23+          TTCTCTATTGGCAGAGCCAAACAATGCAGATGATGTATCAAGTCATTGCACGGGAGATCA
                      ____________________________________________________________
consensus             TTCTCTATTGGCAGAGCCAAACAATGCAGATGATGTATCAAGTCATTGCACGGGAGATCA
 
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rJMSF027L19+                                                           CCTTGGCAACC
rJMSF028E04+             CTATGCAACCTGATGCACATCCTACAGACTACTTGAATTTCTA-TGCCTTGGCAACC
rJMSF052C23+          AATCTATGCAACTTGATGCACATCCTACAGACTACTTGAATTTCTATTGCCTTGGCAACC
rJMSF024E14+             CTATGCAACTTGATGCACATCCTACAGACTACNTGAATTTCTATTGCCTTGGCAACC
                      ____________________________________________________________
consensus             AATCTATGCAACTTGATGCACATCCTACAGACTACTTGAATTTCTATTGCCTTGGCAACC
 
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rJMSF027L19+          GGGAAGAAGTTCCAAGTTCAGTGGCTGAGTCCATTAGTGCCACAGATAAGGTTTCAGACT
rJMSF028E04+          GGGAAGAAGTTCCAAGTTCAGTGGCTGAGTCCATTAGTGCCACAGATAAGGTTTCAGACT
rJMSF052C23+          GGGAAGAAGTTCCAAGTTCAGTGGCTGAGTCCATTAGTGCCACAGATAAGGTTTCAGACT
rJMSF024E14+          GGGAAGAAGTTCCAAGTTCAGTGGCTGAGTCCATTAGTGCCACAGATAAGGTTTCAGACT
                      ____________________________________________________________
consensus             GGGAAGAAGTTCCAAGTTCAGTGGCTGAGTCCATTAGTGCCACAGATAAGGTTTCAGACT
 
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rJMSF027L19+          CGTTTAAGTTTCAGCGCTTCATGATATATGTGCATGCTAAAGGAATGATAGTGGATGATG
rJMSF028E04+          CGTTTAAGTTTCAGCGCTTCATGATATATGTGCATGCTAAAGGAATGATAGTGGATGATG
rJMSF052C23+          CGTTTAAGTTTCAGCGCTTCATGATATATGTGCATGCTAAAGGAATGATAGTGGATGATG
rJMSF024E14+          CGTTTAAGTTTCAGCGCTTCATGATATATGTGCATGCTAAAGGAATGATAGTGGATGATG
                      ____________________________________________________________
consensus             CGTTTAAGTTTCAGCGCTTCATGATATATGTGCATGCTAAAGGAATGATAGTGGATGATG
 
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rJMSF027L19+          AGTATGTGATTATAGGATCTGCAAATATAAACCAGCGATCTATGGCTGGCTCGAAGGACA
rJMSF028E04+          AGTATGTGATTATAGGATCTGCAAATATAAACCAGCGATCTATGGCTGGCTCGAAGGACA
rJMSF052C23+          AGTATGTGATTATAGGATCTGCAAATATAAACCAGCGATCTATGGCTGGCTCGAAGGACA
rJMSF002F22+                       AGGATCTGCAAATATAAACCAGCGATCTATGGCTGGCTCGAAGGACA
rJMSF024E14+          AGTATGTGATTATAGGATCTGCAAATATAAACCAGCGATCTATGGCTGGCTCGAAGGAC-
                      ____________________________________________________________
consensus             AGTATGTGATTATAGGATCTGCAAATATAAACCAGCGATCTATGGCTGGCTCGAAGGACA
 
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rJMSF027L19+          CTGAGATAGCTATGGGTGCTTACCAGCCTCATCATACTTGGGCAACAAAGCAGGGGCATC
rJMSF028E04+          CTGAGATAGCTATGGGTGCTTACCAGCCTCATCATACTTGGGCAACAAAGCAGGGGCATC
rJMSF052C23+          CTGAGATAGCTATGGGTGCTTACCAGCCTCATCATACTTGGGCAACAAAGCAGGGGCATC
rJMSF002F22+          CTGAGATAGCTATGGGTGCTTACCAGCCTCATCATACTTGGGCAACAAAGCAGGGGCATC
rJMSF024E14+          CTGAGATAGCTATGGGTGCTTACCAGCCTCATCATACTTGGGCAACAAAGCAGGGGCATC
                      ____________________________________________________________
consensus             CTGAGATAGCTATGGGTGCTTACCAGCCTCATCATACTTGGGCAACAAAGCAGGGGCATC
 
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rJMSF027L19+          CTCGGGGACAGATCTATGGATACCGGAAGTCGTTGTGGGCAGAACACCTGGGAACGATTG
rJMSF028E04+          CTCGGGGACAGATCTATGGATACCGGAAGTCGTTGTGGGCAGAACACCTGGGAACGATTG
rJMSF052C23+          CTCGGGGACAGATCTATGGATACCGGAAGTCGTTGTGGGCAGAACACCTGGGAACGATTG
rJMSF002F22+          CTCGGGGACAGATCTATGGATACCGGAAGTCGTTGTGGGCAGAACACCTGGGAACGATTG
rJMSF024E14+          CTCGGGGACAGATCTATGGATACCGGAAGTCGTTGTGGGCAGAACACCTGGGAACGATTG
                      ____________________________________________________________
consensus             CTCGGGGACAGATCTATGGATACCGGAAGTCGTTGTGGGCAGAACACCTGGGAACGATTG
 
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rJMSF027L19+          AAAAATGTTTTAACGAGCCAGGAAAAGTGAAGTGCGTGAAGTTTGTGAACGAGGTTGCTC
rJMSF028E04+          AAAAATGTTTTAACGAGCCAGGAAAAGTGAAGTGCGTGAAGTTTGTGAACGAGGTTGCTC
rJMSF052C23+          AAAAATGTTTTAACGAGCCAGGAAAAGTGAAGTGCGTGAAGTTTGTGAACGAGGTTGCTC
rJMSF002F22+          AAAAATGTTTTAACGAGCCAGGAAAAGTGAAGTGCGTGAAGTTTGTGAACGAGGTTGCTC
rJMSF024E14+          AAAAATGTTTTAACGAGCCAGGAAAAGTGAAGTGCGTGAAGTTTGTGAACTAGGTTGCTC
                      ____________________________________________________________
consensus             AAAAATGTTTTAACGAGCCAGGAAAAGTGAAGTGCGTGAAGTTTGTGAACGAGGTTGCTC
 
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rJMSF027L19+          AAGAAAACTGGAGAAAATACACAGACGAGAATTTCAATCGCTTGCAGGGCCATCTTCTGA
rJMSF028E04+          AAGAAAACTGGAGAAAATACACAGACGAGAATTTCAATCGCTTGCAGGGCCATCTTCTGA
rJMSF052C23+          AAGAAAACTGGAGAAAATACACAGACGAGAATTTCAATCGCTTGCAGGGCCATCTTCTGA
rJMSF002F22+          AAGAAAACTGGAGAAAATACACAGACGAGAATTTCAATCGCTTGCAGGGCCATCTTCTGA
rJMSF024E14+          AAGAAAACTGGAGAAAATACACAGACGAGAATTTCAATCGCTTGCAGGGCCATCTTCTGA
                      ____________________________________________________________
consensus             AAGAAAACTGGAGAAAATACACAGACGAGAATTTCAATCGCTTGCAGGGCCATCTTCTGA
 
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rJMSF027L19+          AGTATCCTTTAGAGGTGAAAGAAGACGGTACAGTATGCCCGTTACCTGGGAATGAAAATT
rJMSF028E04+          AGTATCCTTTAGAGGTGAAAGAAGACGGTACAGTATGCCCGTTACCTGGGAATGAAAATT
rJMSF052C23+          AGTATCCTTTAGAGGTGAAAGAAGACGGTACAGTATGCCCGTTACCTGGGAATGAAAATT
rJMSF002F22+          AGTATCCTTTAGAGGTGAAAGAAGACGGTACAGTATGCCCGTTACCTGGGAATGAAAATT
rJMSF024E14+          AGTATCCTTTAGAGGTGAAAGAAGACGGTACAGTATGCCCGTTACCTGGGAATGAAAATT
                      ____________________________________________________________
consensus             AGTATCCTTTAGAGGTGAAAGAAGACGGTACAGTATGCCCGTTACCTGGGAATGAAAATT
 
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rJMSF027L19+          TCCCGGATATTGGGGGTAAAGTCATCGGAACTCCCTCGGCTACACTTCCTGATGTTCTCA
rJMSF028E04+          TCCCGGATATTGGGGGTAAAGTCATCGGAACTCCCTCGGCTACACTTCCTGATGTTCTCA
rJMSF052C23+          TCCCGGATATTGGGGGTAAAGTCATCGGAACTCCCTCGGCTACACTTCCTGATGTTCTCA
rJMSF002F22+          TCCCGGATATTGGGGGTAAAGTCATCGGAACTCCCTCGGCTACACTTCCTGATGTTCTCA
rJMSF024E14+          TCCCGGATATTGGGGGTAAAGTCATCGGAACTCCCTCGGCTACACTTCCTGATGTTCTCA
                      ____________________________________________________________
consensus             TCCCGGATATTGGGGGTAAAGTCATCGGAACTCCCTCGGCTACACTTCCTGATGTTCTCA
 
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rJMSF027L19+          CAACATAGTTGTCGATAACCATGAGTGGATTGCATCTGCTTTTGTTTTGTTTTCCTGATT
rJMSF028E04+          CAACATAGTTGTCGATAACCATGAGTGGATTGCATCTGCTTTTGTTTTGTTTTCCTGATT
rJMSF052C23+          CAACATAGTTGTCGATAACCATGAGTGGATTGCATCTGCTTTTGTTTTGTTTTCCTGATT
rJMSF002F22+          CAACATAGTTGTCGATAACCATGAGTGGATTGCATCTGCTTTTGTTTTGTTTTCCTGATT
rJMSF024E14+          CAACATAGTTGTCGATAACCATGAGTGGATTGCATCTGCTTTTGTTTTGTTTTCCTGATT
                      ____________________________________________________________
consensus             CAACATAGTTGTCGATAACCATGAGTGGATTGCATCTGCTTTTGTTTTGTTTTCCTGATT
 
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rJMSF027L19+          TGGATGCCATTGTTAAGAGTGGGTTGTTGTTGGATGGAAATTCAGCCCTGTTTGGACCAT
rJMSF028E04+          TGGATGCCATTGTTAAGAGTGGGTTGTTGTTGGATGGAAATTCAGCCCTGTTTGGACCAT
rJMSF052C23+          TGGATGCCATTGTTAAGAGTGGGTTGTTGTTGGATGGAAATTCAGCCCTGTTTGGACCAT
rJMSF002F22+          TGGATGCCATTGTTAAGAGTGGGTTGTTGTTGGATGGAAATTCAGCCCTGTTTGGACCAT
rJMSF024E14+          TGGATGCCATTGTTAAGAGTGGGTTGTTGTTGGATGGAAATTCAGCCCTGTTTGGACCAT
                      ____________________________________________________________
consensus             TGGATGCCATTGTTAAGAGTGGGTTGTTGTTGGATGGAAATTCAGCCCTGTTTGGACCAT
 
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rJMSF027L19+          AGATTGTTAGAACTGAATTCTTTGATGGATGCT                           
rJMSF028E04+          AGATTGTTAGAACTGAATTCTTTGATGGATGCT                           
rJMSF052C23+          AGATTGTTAGAACTGAATTCTTTGATGGATGCTGTTCTTGATGTGTTGAT          
rJMSF002F22+          AGATTGTTAGAACTGAATTCTTTGATGGATGCTGTTCTTGATGTGTTGAT          
rJMSF024E14+          AGATTGTTAGAACTGAATTCTTTGATGGATGCTGTTCTTGATGTGTTGATGTGAGAAGTT
                      ____________________________________________________________
consensus             AGATTGTTAGAACTGAATTCTTTGATGGATGCTGTTCTTGATGTGTTGATGTGAGAAGTT