Contig 008533:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006D09Sequence169008533 (10)
JMCP009G06Sequence180008533 (10)
JMCP015A07Sequence312008533 (10)
JMCP015D09Sequence185008533 (10)
JMCP016G02Sequence224008533 (10)
JMCP016G12Sequence257008533 (10)588019480gb|ABL67954.2|3e-211-aminocyclopropane-1-carboxylate oxidase [Ipomoea nil]
JMFF026D12Sequence508008533 (10)476008533 (10)
JMFF032K20Sequence557007304 (7)ref|XP_007016698.1|9e-06RNA-binding family protein, putative isoform 1 [Theobroma cacao] ref|XP_00701669717008533 (10)emb|CDP09683.1|3e-04unnamed protein product [Coffea canephora]
JMSF024D15Sequence685007304 (7)ref|XP_004228485.1|7e-24PREDICTED: UBP1-associated protein 2A [Solanum lycopersicum] ref|XP_004228486.1|791008533 (10)ref|XP_004228485.1|1e-18PREDICTED: UBP1-associated protein 2A [Solanum lycopersicum] ref|XP_004228486.1|

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP015A07+                                       AAACCACCAAAGTAAATTTCCTGAGAGACAT
                      ____________________________________________________________
consensus                                          AAACCACCAAAGTAAATTTCCTGAGAGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016G02+                                                                   AAA
rJMCP015A07+          TGATAAGGAAAACCTACCAGCTTCTCAGATCATTTTAGACAGAAACGTACTGAAATCAAA
JMCP016G12+                                                     AAACGTACTGAAATCAAA
rJMFF026D12-                                                                    AA
                      ____________________________________________________________
consensus             TGATAAGGAAAACCTACCAGCTTCTCAGATCATTTTAGACAGAAACGTACTGAAATCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016G02+          ATGTGCTACATAGACCATAGTCATTGCCATAGTTTTAGAAAACAACTGCTAGATCGAAAG
rJMCP015A07+          ATGTGCTACATAGACCATAGTCATTGCCATAGTTTTAGAAAACAACTGCTAGATCGAAAG
JMCP016G12+           ATGTGCTACATAGACCATAGTCATTGCCATAGTTTTAGAAAACAtgaGCTAGATCGAAAG
JMCP015D09+                                               AGAAAACAACTGCTAGATCGAAAG
rJMFF026D12-          ATGTGCTACATAGACCATAGTCATTGCCATAGTTTTAGAAAACAACTGCTAGATCGAAAG
rJMFF032K20-           TGTGCTACATAGACCATAGTCATTGCCATAGTTTTAGAAAACAACTGCTAGATCGAAAG
JMCP009G06+                                                             AGATCGAAAG
rJMSF024D15-                                                           TAGATCGAAAG
                      ____________________________________________________________
consensus             ATGTGCTACATAGACCATAGTCATTGCCATAGTTTTAGAAAACAACTGCTAGATCGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016G02+          TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
rJMCP015A07+          TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
JMCP016G12+           TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAAgttAgtcTAACT
JMCP015D09+           TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
JMCP006D09+            GTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
rJMFF026D12-          TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
rJMFF032K20-          TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
JMCP009G06+           TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
rJMSF024D15-          TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
                      ____________________________________________________________
consensus             TGTTTGAAGAAAACAGAAAGATACATATTCAAGATTCCAGTCTTTAAACAAACAGTAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016G02+          TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACgt
rJMCP015A07+          TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
JMCP016G12+           TTTTGCTAgttTAAAAATACGAgtaTTGgtaTTGATagTGGAACTTCAGAAGAATCACgt
JMCP015D09+           TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
JMCP006D09+           TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
rJMFF026D12-          TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
rJMFF032K20-          TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
JMCP009G06+           TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
rJMSF024D15-          TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
                      ____________________________________________________________
consensus             TTTTGCTACAATAAAAATACGACATTTGCATTTGATTCTGGAACTTCAGAAGAATCACCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP016G02+          cTCCAAAAgttAAAGATTGATGgtaTTATGAAGGAATCTTC                   
rJMCP015A07+          GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTC                   
JMCP016G12+           cTCgttAAgttAAAGATTGATGgtaTTATcAAGGttagaTCTGCCCGGCC          
JMFF026D12+                                             AATCTTCTGCCAGGCCTAATGACCAC
JMCP015D09+           GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTC                   
JMCP006D09+           GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTCTGCCAGGCC          
rJMFF026D12-          GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTCTGCCAGGCCTAATGACCAC
rJMFF032K20-          GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTCTGCCAGGCCTAATGACCAC
JMCP009G06+           GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTCTGCCAGGCC          
rJMSF024D15-          GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTCTGCCAGGCCTAATGACCAC
                      ____________________________________________________________
consensus             GTCCAAAACAAAAAGATTGATGCATTTATGAAGGAATCTTCTGCCAGGCCTAATGACCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF026D12+           GCCAATGGGCACCACCTTGCGGCCTCACTCCTCCCTGCCCCATAGCTGGGTTCTGATATC
rJMFF026D12-          GCCAATGGGCACCACCTTGCGGCCTCACTCCTCCCTGCCCCATAGCTGGGTTCTGATATC
rJMFF032K20-          GTCAATGGGCACCACCTTGCGGCCTCACTCCTCCCTGCCCCATAGCTGGGTTCTGATATC
rJMSF024D15-          GCCAATGGGCACCACCTTGCGGCCTCACTCCTCCCTGCCCCATAGCTGGGTTCTGATATC
                      ____________________________________________________________
consensus             GCCAATGGGCACCACCTTGCGGCCTCACTCCTCCCTGCCCCATAGCTGGGTTCTGATATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF026D12+           CTCCCTGCATTCCTGGATGACCTGCATAGCCTCCTGCAGCACTCTGAGCCCCATATCCCG
rJMFF026D12-          CTCCCTGCATTCCTGGATGACCTGCATAGCCTCCTGCAGCACTCTGAGCCCCATATCCCG
rJMFF032K20-          CTCCCTGCATTCCTGGATGACCTGCATAGCCTCCTGCAGCACTCTGAGCCCCATATCCCG
rJMSF024D15-          CTCCCTGCATTCCTGGATGACCTGCATAGCCTCCTGCAGCACTCTGAGCCCCATATCCCG
                      ____________________________________________________________
consensus             CTCCCTGCATTCCTGGATGACCTGCATAGCCTCCTGCAGCACTCTGAGCCCCATATCCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF026D12+           GTGCATTGTTCACCACAGGTGGAACCCCATGAGGATTCACAGGAAGTCCTCCAAGTAGAT
rJMFF026D12-          GTGCATTGTTCACCACAGGTGGAACCCCATGAGGATTCACAGGAAGTCCTCCAAGTAGAT
rJMFF032K20-          GTGCATTGTTCACCACAGGTGGAACCCCATGAGGATTCACAGGAAGTCCTCCAAGTAGAT
rJMSF024D15-          GTGCATTGTTCACCACAGGTGGAACCCCATGAGGATTCACAGGAAGTCCTCCAAGTAGAT
                      ____________________________________________________________
consensus             GTGCATTGTTCACCACAGGTGGAACCCCATGAGGATTCACAGGAAGTCCTCCAAGTAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF026D12+           TACCAATCCCTAGTCCAGCTCCTTGTGTTGTAAGCAATGCAGTGAGTGCCTGTC      
rJMFF026D12-          TACCAATCCCTAGTCCAGCTCCTTGTGTTGTAAGCAATGCAGTGAGTGCCTGTC      
rJMFF032K20-          TACCAATCCCTAGTCCAGCTCCTTGTGTTGTAAGCAATGCAGTGAGTGCCTGTCCAAGAA
rJMSF024D15-          TACCAATCCCTAGTCCAGCTCCTTGTGTTGTAAGCAATGCAGTGAGTGCCTGTCCAAGAA
                      ____________________________________________________________
consensus             TACCAATCCCTAGTCCAGCTCCTTGTGTTGTAAGCAATGCAGTGAGTGCCTGTCCAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF032K20-          CAGGGGCCACAGCTGGATTGAACCCAACAGCTCCAGGCCCTGCAGCTGGAGCCATCAAAT
rJMSF024D15-          CAGGGGCCACAGCTGGATTGAACCCAACAGCTCCAGGCCCTGCAGCTGGAGCCATCAAAT
                      ____________________________________________________________
consensus             CAGGGGCCACAGCTGGATTGAACCCAACAGCTCCAGGCCCTGCAGCTGGAGCCATCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF032K20-          GTCCTGCTGAAGTAGCTCCACTTCCACCACCAGAAGAATATTTCCCCTTCTTAGCTGTGT
rJMSF024D15-          GTCCTGCTGAAGTAGCTCCACTTCCACCACCAGAAGAATATTTCCCCTTCTTAGCTGTGT
                      ____________________________________________________________
consensus             GTCCTGCTGAAGTAGCTCCACTTCCACCACCAGAAGAATATTTCCCCTTCTTAGCTGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF032K20-          GCTGATAATACTGCTGTTGCTGATGCTGATGTTGGGGATAATGTGGCTGCTGTTGNTGCT
rJMSF024D15-          GCTGATAATACTGCTGTTGCTGATGCTGATGTTGGGGATAATGTGGCTGCTGTTGTTGCT
                      ____________________________________________________________
consensus             GCTGATAATACTGCTGTTGCTGATGCTGATGTTGGGGATAATGTGGCTGCTGTTGTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF032K20-          GCTGTGAATAATTCTTATGCTGCTTTGGCCCATCAATTGCCTTCTGGCAATTCAGTGT  
rJMSF024D15-          GCTGTGAATAATTCTTATGCTGCTTTGGCCCATCAATTGCCTTCTGGCAATTCAGTGTAT
                      ____________________________________________________________
consensus             GCTGTGAATAATTCTTATGCTGCTTTGGCCCATCAATTGCCTTCTGGCAATTCAGTGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024D15-          GCCCCTCAAAAATCTTATGAGGCTCCTCCAGCGCCTTCTTTGCACCCTCAACAGACCTGT
                      ____________________________________________________________
consensus             GCCCCTCAAAAATCTTATGAGGCTCCTCCAGCGCCTTCTTTGCACCCTCAACAGACCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF024D15-          ACACAAACAAACAGAAACCTTTTGGTTTCCTGTATACTTGTCNATCCCAGAGGTCCTTCC
                      ____________________________________________________________
consensus             ACACAAACAAACAGAAACCTTTTGGTTTCCTGTATACTTGTCNATCCCAGAGGTCCTTCC