Contig 008530:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023N12Sequence637008530 (2)gb|EYU35110.1|1e-53hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata]687008530 (2)gb|EYU35110.1|8e-54hypothetical protein MIMGU_mgv1a016565mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF023N12-                                                 GGTCTCCGCCCTTGTTCATATT
                      ____________________________________________________________
consensus                                                   GGTCTCCGCCCTTGTTCATATT
 
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JMSF023N12-           CAACTTTCTGCCACATAACCCTTTAATTCCTTATTCAAATAATAATCCGTTTTGAGCAAT
                      ____________________________________________________________
consensus             CAACTTTCTGCCACATAACCCTTTAATTCCTTATTCAAATAATAATCCGTTTTGAGCAAT
 
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JMSF023N12-           CATCCCATTCTGTTGCACCTCCTCGCCTCCGCGCATTGCGGCACCTCGCAAGATCGTTGA
                      ____________________________________________________________
consensus             CATCCCATTCTGTTGCACCTCCTCGCCTCCGCGCATTGCGGCACCTCGCAAGATCGTTGA
 
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JMSF023N12-           GCCAGCAACCAGTACCCAAACCATCTTCCGTCTTCGTCTCGGTCAGCAGCTACACCGGCG
                      ____________________________________________________________
consensus             GCCAGCAACCAGTACCCAAACCATCTTCCGTCTTCGTCTCGGTCAGCAGCTACACCGGCG
 
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JMSF023N12-           ACGATTGTCGATTTCTTCTCCGCCCGCTCTTTCACCGTCGTTCGCCAACAACGTGCAGCT
                      ____________________________________________________________
consensus             ACGATTGTCGATTTCTTCTCCGCCCGCTCTTTCACCGTCGTTCGCCAACAACGTGCAGCT
 
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JMSF023N12-           GCTCAGTTTGGTGTAAGTATGTCAGGCACAGAGGAGGAGGTCAAAGAGCAATCAGATGAA
                      ____________________________________________________________
consensus             GCTCAGTTTGGTGTAAGTATGTCAGGCACAGAGGAGGAGGTCAAAGAGCAATCAGATGAA
 
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JMSF023N12-           GCTGCTTTGGAAAACACTGAAAAACCCATGCCATCACCCCAAGAGGAGGAGGAAACAATG
                      ____________________________________________________________
consensus             GCTGCTTTGGAAAACACTGAAAAACCCATGCCATCACCCCAAGAGGAGGAGGAAACAATG
 
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JMSF023N12-           AAGAAAAAATATGGAGGAATCATGCCCAAGAAGCCACCATTGATTTCAAATGACCATGAA
rJMSF023N12+          AAGAAAAAATATGGAGGAATCATGCCCAAGAAGCCACCATTGATTTCAAATGACCATGAA
                      ____________________________________________________________
consensus             AAGAAAAAATATGGAGGAATCATGCCCAAGAAGCCACCATTGATTTCAAATGACCATGAA
 
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JMSF023N12-           CGGGCTTATTTTGATTCTGCTGATTGGGCTCTTGGAAAGCAAGGTGTAGAGAAGCCCAAA
rJMSF023N12+          CGGGCTTATTTTGATTCTGCTGATTGGGCTCTTGGAAAGCAAGGTGTAGAGAAGCCCAAA
                      ____________________________________________________________
consensus             CGGGCTTATTTTGATTCTGCTGATTGGGCTCTTGGAAAGCAAGGTGTAGAGAAGCCCAAA
 
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JMSF023N12-           GGTCCACTGGAGGCACTTCGGCCGAAGTTACAGCCAACACAACAGCAAACTCGATACCGC
rJMSF023N12+          GGTCCACTGGAGGCACTTCGGCCGAAGTTACAGCCAACACAACAGCAAACTCGATACCGC
                      ____________________________________________________________
consensus             GGTCCACTGGAGGCACTTCGGCCGAAGTTACAGCCAACACAACAGCAAACTCGATACCGC
 
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JMSF023N12-           AAATCTCCTTATGCCCCAGCAGAAGGTGAAGATCGAAGCAATGCCCCACCAGAGGATTAA
rJMSF023N12+          AAATCTCCTTATGCCCCAGCAGAAGGTGAAGATCGAAGCAATGCCCCACCAGAGGATTAA
                      ____________________________________________________________
consensus             AAATCTCCTTATGCCCCAGCAGAAGGTGAAGATCGAAGCAATGCCCCACCAGAGGATTAA
 
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JMSF023N12-           CTCCNAATGAATGAG                                             
rJMSF023N12+          CTCCAAATGAATGAGAAAGAAATGCCATCTTTTGATCCCTGGATGATGCTGATTTTAGTT
                      ____________________________________________________________
consensus             CTCCAAATGAATGAGAAAGAAATGCCATCTTTTGATCCCTGGATGATGCTGATTTTAGTT
 
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rJMSF023N12+          ATAGTTACCAGTACTTGAGTAATTTTCTTCACTTCTGTTTAAATTTTTTTTAAGAATAAG
                      ____________________________________________________________
consensus             ATAGTTACCAGTACTTGAGTAATTTTCTTCACTTCTGTTTAAATTTTTTTTAAGAATAAG
 
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rJMSF023N12+          ACAAAAAGTTATTGTCCTTGTTGAGGGGAAAGTAGAATCATTTAATGCAGGCTTTGATTG
                      ____________________________________________________________
consensus             ACAAAAAGTTATTGTCCTTGTTGAGGGGAAAGTAGAATCATTTAATGCAGGCTTTGATTG
 
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rJMSF023N12+          TGAGATTTTCCCGTCTTCCACCGATGTAACAATTCTGCTGAGTTATATGTAATGCAAAAC
                      ____________________________________________________________
consensus             TGAGATTTTCCCGTCTTCCACCGATGTAACAATTCTGCTGAGTTATATGTAATGCAAAAC