Contig 008528:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN003C22Sequence629008528 (6)ref|XP_011072561.1|1e-144PREDICTED: threonine synthase, chloroplastic [Sesamum indicum]
JMSF019C05Sequence780008528 (6)ref|XP_011072561.1|3e-128PREDICTED: threonine synthase, chloroplastic [Sesamum indicum]
JMSF023I04Sequence741008528 (6)ref|XP_011072561.1|8e-109PREDICTED: threonine synthase, chloroplastic [Sesamum indicum]
JMSF031F20Sequence706008528 (6)ref|XP_011072561.1|5e-108PREDICTED: threonine synthase, chloroplastic [Sesamum indicum]
JMSF031P22Sequence660008528 (6)ref|XP_011072561.1|8e-105PREDICTED: threonine synthase, chloroplastic [Sesamum indicum]
JMSF046G05Sequence831008528 (6)ref|XP_011072561.1|2e-155PREDICTED: threonine synthase, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


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JMFN003C22-                                                                 CCTGTG
                      ____________________________________________________________
consensus                                                                   CCTGTG
 
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JMFN003C22-           GGTGAAACACTGCGGGATTAGCCACACCGGGAGCTTTAAAGATCTGGGCATGACGGTTTT
                      ____________________________________________________________
consensus             GGTGAAACACTGCGGGATTAGCCACACCGGGAGCTTTAAAGATCTGGGCATGACGGTTTT
 
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JMFN003C22-           GGTGAGCCAGGTGAACCGGCTGCGGAAAATGAAGAAACCGGTGGTCGGCGTGGGCTGCGC
                      ____________________________________________________________
consensus             GGTGAGCCAGGTGAACCGGCTGCGGAAAATGAAGAAACCGGTGGTCGGCGTGGGCTGCGC
 
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JMFN003C22-           TTCCACCGGCGACACCTCGGCGGCGCTATCGGCCTATTGCGCCTCCGCTGGGATCCCGTC
                      ____________________________________________________________
consensus             TTCCACCGGCGACACCTCGGCGGCGCTATCGGCCTATTGCGCCTCCGCTGGGATCCCGTC
 
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JMFN003C22-           CATCGTCTTCCTCCCCGCAAATCGGATATCCCTTGCCCAATTAGTCCAGCCTATCGCGAA
                      ____________________________________________________________
consensus             CATCGTCTTCCTCCCCGCAAATCGGATATCCCTTGCCCAATTAGTCCAGCCTATCGCGAA
 
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JMFN003C22-           TGGCGCATTCGTGTTAAGCATCGACACAGATTTCGACGGGTGTATGCAGATGATTCGCGA
rJMSF046G05+                                                    TATGCAGATGATTCGCGA
                      ____________________________________________________________
consensus             TGGCGCATTCGTGTTAAGCATCGACACAGATTTCGACGGGTGTATGCAGATGATTCGCGA
 
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JMFN003C22-           AGTCACATCGGAATTGCCCATTTACTTAGCCAATTCCCTCAACAGTTTGAGACTCGAGGG
rJMSF046G05+          AGTCACATCGGAATTGCCCATTTACTTAGCCAATTCCCTCAACAGTTTGAGACTCGAGGG
                      ____________________________________________________________
consensus             AGTCACATCGGAATTGCCCATTTACTTAGCCAATTCCCTCAACAGTTTGAGACTCGAGGG
 
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JMFN003C22-           CCAGAAAACGGCGGCCATTGAGATTTTGCAGCAATTCGATTGGCAAGTCCCAGATTGGGT
rJMSF046G05+          CCAGAAAACGGCGGCCATTGAGATTTTGCAGCAATTCGATTGGCAAGTCCCAGATTGGGT
rJMSF019C05+                                    TGCAGCNATTCGATTGGCAAGTCCCAGATTGGGT
                      ____________________________________________________________
consensus             CCAGAAAACGGCGGCCATTGAGATTTTGCAGCAATTCGATTGGCAAGTCCCAGATTGGGT
 
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JMFN003C22-           GATAGTTCCAGGTGGAAACTTAGGGAATATTTACGCATTCTACAAAGGGTTTCACATGTG
rJMSF046G05+          GATAGTTCCAGGTGGAAACTTAGGGAATATTTACGCATTCTACAAAGGGTTTCACATGTG
rJMSF031P22+                                                                    TG
rJMSF019C05+          GATAGTTCCAGGTGGAAACTTAGGGAATATTTACGCATTCTACAAAGGGTTTCACATGTG
rJMSF031F20+                                                   ACAAAGGGTTTCACATGTG
rJMSF023I04+                                                 CTACAAAGGGTTTCACATGTG
                      ____________________________________________________________
consensus             GATAGTTCCAGGTGGAAACTTAGGGAATATTTACGCATTCTACAAAGGGTTTCACATGTG
 
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JMFN003C22-           CAAAGAATTAGGGCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
rJMSF046G05+          CAAAGAATTAGGGCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
rJMSF031P22+          CAAAGAATTAGGNCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
rJMSF019C05+          CAAAGAATTAGGGCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
rJMSF031F20+          CAAAGAATTAGGGCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
rJMSF023I04+          CAAAGAATTAGGGCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
                      ____________________________________________________________
consensus             CAAAGAATTAGGGCTTGTTGACAGGATTCCCAGGCTGGTTTGTGCTCAAGCCGCCAATGC
 
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JMFN003C22-           TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
rJMSF046G05+          TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
rJMSF031P22+          TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
rJMSF019C05+          TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
rJMSF031F20+          TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
rJMSF023I04+          TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
                      ____________________________________________________________
consensus             TAATCCTCTTTACTTGCATTACAAATCCGGGTGGAAAGACTTCAAGCCCGTCAAAGCAAG
 
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JMFN003C22-           TTCCACTTTTGCATCCGCCATTC                                     
rJMSF046G05+          TTCCACTTTTGCATCCGCCATTCAGATTGGTGACCCTGTATCTATAGATAGAGCTGTTTT
rJMSF031P22+          TTCCACTTTTGCATCCGCCATTCAGATTGGTGACCCTGTATCTATAGATAGAGCTGTTTT
rJMSF019C05+          TTCCACTTTTGCATCCGCCATTCAGATTGGTGACCCTGTATCTATAGATAGAGCTGTTTT
rJMSF031F20+          TTCCACTTTTGCATCCGCCATTCAGATTGGTGACCCTGTATCTATAGATAGAGCTGTTTT
rJMSF023I04+          TTCCACTTTTGCATCCGCCATTCAGATTGGTGACCCTGTATCTATAGATAGAGCTGTTTT
                      ____________________________________________________________
consensus             TTCCACTTTTGCATCCGCCATTCAGATTGGTGACCCTGTATCTATAGATAGAGCTGTTTT
 
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rJMSF046G05+          TGCTCTCAAGAACTCAAATGGCATTGTCGAGGAGGCCACCGAGGAAGAATTGATGGATGC
rJMSF031P22+          TGCTCTCAAGAACTCAAATGGCATTGTCGAGGAGGCCACCGAGGAAGAATTGATGGATGC
rJMSF019C05+          TGCTCTCAAGAACTCAAATGGCATTGTCGAGGAGGCCACCGAGGAAGAATTGATGGATGC
rJMSF031F20+          TGCTCTCAAGAACTCAAATGGCATTGTCGAGGAGGCCACCGAGGAAGAATTGATGGATGC
rJMSF023I04+          TGCTCTCAAGAACTCAAATGGCATTGTCGAGGAGGCCACCGAGGAAGAATTGATGGATGC
                      ____________________________________________________________
consensus             TGCTCTCAAGAACTCAAATGGCATTGTCGAGGAGGCCACCGAGGAAGAATTGATGGATGC
 
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rJMSF046G05+          CACGGCCCAGGCAGACTCAACCGGGATGTTCATATGCCCTCACACCGGGGTGGCATTGAC
rJMSF031P22+          CACGGCCCAGGCAGACTCAACCGGGATGTTCATATGCCCTCACACCGGGGTGGCATTGAC
rJMSF019C05+          CACGGCCCAGGCAGACTCAACCGGGATGTTCATATGCCCTCACACCGGGGTGGCATTGAC
rJMSF031F20+          CACGGCCCAGGCAGACTCAACCGGGATGTTCATATGCCCTCACACCGGGGTGGCATTGAC
rJMSF023I04+          CACGGCCCAGGCAGACTCAACCGGGATGTTCATATGCCCTCACACCGGGGTGGCATTGAC
                      ____________________________________________________________
consensus             CACGGCCCAGGCAGACTCAACCGGGATGTTCATATGCCCTCACACCGGGGTGGCATTGAC
 
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rJMSF046G05+          TGCTCTAATCAAGTTAAGGAACAAAGGGGTGATCGGAGCAACGGATAGGACTGTTGTGGT
rJMSF031P22+          TGCTCTAATCAAGTTAAGGAACAAAGGGGTGATCGGAGCAACGGATAGGACTGTTGTGGT
rJMSF019C05+          TGCTCTAATCAAGTTAAGGAACAAAGGGGTGATCGGAGCAACGGATAGGACTGTTGTGGT
rJMSF031F20+          TGCTCTAATCAAGTTAAGGAACAAAGGGGTGATCGGAGCAACGGATAGGACTGTTGTGGT
rJMSF023I04+          TGCTCTAATCAAGTTAAGGAACAAAGGGGTGATCGGAGCAACGGATAGGACTGTTGTGGT
                      ____________________________________________________________
consensus             TGCTCTAATCAAGTTAAGGAACAAAGGGGTGATCGGAGCAACGGATAGGACTGTTGTGGT
 
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rJMSF046G05+          TAGCACAGCTCATGGGCTCAAGTTTACTCAGTCCAAGATTGATTATCATTCGCAGGACAT
rJMSF031P22+          TAGCACAGCTCATGGGCTCAAGTTTACTCAGTCCAAGATTGATTATCATTCGCAGGACAT
rJMSF019C05+          TAGCACAGCTCATGGGCTCAAGTTTACTCAGTCCAAGATTGATTATCATTCGCAGGACAT
rJMSF031F20+          TAGCACAGCTCATGGGCTCAAGTTTACTCAGTCCAAGATTGATTATCATTCGCAGGACAT
rJMSF023I04+          TAGCACAGCTCATGGGCTCAAGTTTACTCAGTCCAAGATTGATTATCATTCGCAGGACAT
                      ____________________________________________________________
consensus             TAGCACAGCTCATGGGCTCAAGTTTACTCAGTCCAAGATTGATTATCATTCGCAGGACAT
 
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rJMSF046G05+          AAAGGACATGGCTTGCCGCTTTGCAAACCCGCCTGTGCAGGTGAAAGCGGATTTTGGTTC
rJMSF031P22+          AAAGGACATGGCTTGCCGCTTTGCAAACCCGCCTGTGCAGGTGAAAGCGGATTTTGGTTC
rJMSF019C05+          AAAGGACATGGCTTGCCGCTTTGCAAACCCGCCTGTGCAGGTGAAAGCGGATTTTGGTTC
rJMSF031F20+          AAAGGACATGGCTTGCCGCTTTGCAAACCCGCCTGTGCAGGTGAAAGCGGATTTTGGTTC
rJMSF023I04+          AAAGGACATGGCTTGCCGCTTTGCAAACCCGCCTGTGCAGGTGAAAGCGGATTTTGGTTC
                      ____________________________________________________________
consensus             AAAGGACATGGCTTGCCGCTTTGCAAACCCGCCTGTGCAGGTGAAAGCGGATTTTGGTTC
 
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rJMSF046G05+          TGTCATGGATGTTCTTAAGAAATACTTGTTGAGCAAAGATTCCAAGAAGTAGGTAATTTT
rJMSF031P22+          TGTCATGGATGTTCTTAAGAAATACTTGTTGAGCAAAGATTCCAAGAAGTAGGTAATTTT
rJMSF019C05+          TGTCATGGATGTTCTTAAGAAATACTTGTTGAGCAAAGATTCCAAGAAGTAGGTAATTTT
rJMSF031F20+          TGTCATGGATGTTCTTAAGAAATACTTGTTGAGCAAAGATTCCAAGAAGTAGGTAATTTT
rJMSF023I04+          TGTCATGGATGTTCTTAAGAAATACTTGTTGAGCAAAGATTCCAAGAAGTAGGTAATTTT
                      ____________________________________________________________
consensus             TGTCATGGATGTTCTTAAGAAATACTTGTTGAGCAAAGATTCCAAGAAGTAGGTAATTTT
 
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rJMSF046G05+          TTCGTTTTGGTTATATATATTCTCTGGCAGGATAGTAAGTTTTGCTCATCTTCTATTGTT
rJMSF031P22+          TTCGTTTTGGTTATATATATTCTCTGGCAGGATAGTAAGTTTTGCTCATCTTCTATTGTT
rJMSF019C05+          TTCGTTTTGGTTATATATATTCTCTGGCAGGATAGTAAGTTTTGCTCATCTTCTATTGTT
rJMSF031F20+          TTCGTTTTGGTTATATATATTCTCTGGCAGGATAGTAAGTTTTGCTCATCTTCTATTGTT
rJMSF023I04+          TTCGTTTTGGTTATATATATTCTCTGGCAGGATAGTAAGTTTTGCTCATCTTCTATTGTT
                      ____________________________________________________________
consensus             TTCGTTTTGGTTATATATATTCTCTGGCAGGATAGTAAGTTTTGCTCATCTTCTATTGTT
 
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rJMSF046G05+          GTTTACATGCTATATTATGTAGAATATGGT                              
rJMSF031P22+          GTTTACATGCTATATTATGTAGAATATGGTTGAATAATTTGTAGGGCCTGGGAATTTG  
rJMSF019C05+          GTTTACATGCTATATTATGTAGAATATGGTTGAATAATTTGTAGGGCCTGGGAATTTGTT
rJMSF031F20+          GTTTACATGCTATATTATGTAGAATATGGTTGAATAATTTGTAGGGCCTGGGAATTTGTT
rJMSF023I04+          GTTTACATGCTATATTATGTAGAATATGGTTGAATAATTTGTAGGGCCTGGGAATTTGTT
                      ____________________________________________________________
consensus             GTTTACATGCTATATTATGTAGAATATGGTTGAATAATTTGTAGGGCCTGGGAATTTGTT
 
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rJMSF019C05+          GTTCTAAAC                                                   
rJMSF031F20+          GTTCTAAAC                                                   
rJMSF023I04+          GTTCTAAACATATGTTGTGTGAAGACTATACAACTCATGAAGCTTTTTTTATGGAGTGTG
                      ____________________________________________________________
consensus             GTTCTAAACATATGTTGTGTGAAGACTATACAACTCATGAAGCTTTTTTTATGGAGTGTG