Contig 008519:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025B04+                                          TTGCTTGAAGCAGCGATTCCCAATCTCG
rJMSF021N23+                                                            CCCAATCTCG
                      ____________________________________________________________
consensus                                             TTGCTTGAAGCAGCGATTCCCAATCTCG
 
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rJMSF025B04+          CCCAGACAACCTTGGACGCCACCAAGATTCAGTGCAACAAGGATGTGGGAAAGTCGATCC
rJMSF021N23+          CCCAGACAACCTTGGACGCCACCAAGATTCAGTGCAACAAGGATGTGGGAAAGTCGATCC
                      ____________________________________________________________
consensus             CCCAGACAACCTTGGACGCCACCAAGATTCAGTGCAACAAGGATGTGGGAAAGTCGATCC
 
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rJMSF025B04+          TCGAGAGCTATTCGAGAGTCTTGGAGAGTCTGGCTTTCAATATCGCAGCACGGATTGATG
rJMSF021N23+          TCGAGAGCTATTCGAGAGTCTTGGAGAGTCTGGCTTTCAATATCGCAGCACGGATTGATG
                      ____________________________________________________________
consensus             TCGAGAGCTATTCGAGAGTCTTGGAGAGTCTGGCTTTCAATATCGCAGCACGGATTGATG
 
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rJMSF025B04+          ATTTACTATACGTGGACGACATAACCAGGCAATCCGATAAGCATTCTTCAGTTACTGCAC
rJMSF021N23+          ATTTACTATACGTGGACGACATAACCAGGCAATCCGATAAGCATTCTTCAGTTACTGCAC
                      ____________________________________________________________
consensus             ATTTACTATACGTGGACGACATAACCAGGCAATCCGATAAGCATTCTTCAGTTACTGCAC
 
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rJMSF025B04+          TCAACACATACGCGAACAGAAAAGTTTCGAGCCCATTCTCCATGCCCCCCCTCTCAGGCA
rJMSF021N23+          TCAACACATACGCGAACAGAAAAGTTTCGAGCCCATTCTCCATGCCCCCCCTCTCAGGCA
                      ____________________________________________________________
consensus             TCAACACATACGCGAACAGAAAAGTTTCGAGCCCATTCTCCATGCCCCCCCTCTCAGGCA
 
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rJMSF025B04+          CCCCATTCAAATCCGCTTTTTCCACTCCAACCCTCTCACCCACCCCTCTGATAAGCCCCG
rJMSF021N23+          CCCCATTCAAATCCGCTTTTTCCACTCCAACCCTCTCACCCACCCCTCTGATAAGCCCCG
                      ____________________________________________________________
consensus             CCCCATTCAAATCCGCTTTTTCCACTCCAACCCTCTCACCCACCCCTCTGATAAGCCCCG
 
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rJMSF025B04+          CCAGGGGAGGAGAGTTAACCCCATTCCTCCATGCCAACACTGCTAAGCTTGCCCGACGTG
rJMSF021N23+          CCAGGGGAGGAGAGTTAACCCCATTCCTCCATGCCAACACTGCTAAGCTTGCCCGACGTG
                      ____________________________________________________________
consensus             CCAGGGGAGGAGAGTTAACCCCATTCCTCCATGCCAACACTGCTAAGCTTGCCCGACGTG
 
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rJMSF025B04+          GCCTTGGAGTAAAACGAGCACTGTCCAACTACCTCGGTGGTGAGACAAAGACGAAGACCT
rJMSF021N23+          GCCTTGGAGTAAAACGAGCACTGTCCAACTACCTCGGTGGTGAGACAAAGACGAAGACCT
                      ____________________________________________________________
consensus             GCCTTGGAGTAAAACGAGCACTGTCCAACTACCTCGGTGGTGAGACAAAGACGAAGACCT
 
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rJMSF025B04+          GTGGAAATCCTCTGGCCTCCATTTCCAACAAAAGTTCCGGCTCACTAGCATCGAAACCTT
rJMSF021N23+          GTGGAAATCCTCTGGCCTCCATTTCCAACAAAAGTTCCGGCTCACTAGCATCGAAACCTT
                      ____________________________________________________________
consensus             GTGGAAATCCTCTGGCCTCCATTTCCAACAAAAGTTCCGGCTCACTAGCATCGAAACCTT
 
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rJMSF025B04+          GCGTGGAAGCTCAAGAATTGCAGAAGGAGCAGTGTTCTGTGTTAAAACCAGTTAACCGCT
rJMSF021N23+          GCGTGGAAGCTCAAGAATTGCAGAAGGAGCAGTGTTCTGTGTTAAAACCAGTTAACCGCT
                      ____________________________________________________________
consensus             GCGTGGAAGCTCAAGAATTGCAGAAGGAGCAGTGTTCTGTGTTAAAACCAGTTAACCGCT
 
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rJMSF025B04+          GAAACCTGTAGAGTTACAGACTTACCACTTGTAGAAGAGAGGGATATATATATAGGGAGC
rJMSF021N23+          GAAACCTGTAGAGTTACAGACTTACCACTTGTAGAAGAGAGGGATATATATATAGGGAGC
                      ____________________________________________________________
consensus             GAAACCTGTAGAGTTACAGACTTACCACTTGTAGAAGAGAGGGATATATATATAGGGAGC
 
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rJMSF025B04+          ACACAATCAAATTCTGGACCAGTTGACATACAAATTGTTGCAGAA               
rJMSF021N23+          ACACAATCAAATTCTGGA-CAGTTGACATACAAATTGTTGCAGAAACTAATTGTATTCCA
                      ____________________________________________________________
consensus             ACACAATCAAATTCTGGACCAGTTGACATACAAATTGTTGCAGAAACTAATTGTATTCCA