Contig 008518:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016L15Sequence512013364 (3)ref|XP_009779634.1|2e-26PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Nicotiana sylvestr787008518 (3)ref|XP_004237858.1|4e-73PREDICTED: alkylated DNA repair protein alkB homolog 8 [Solanum lycopersicum]
JMSF021N12Sequence652013364 (3)ref|XP_009779634.1|2e-59PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Nicotiana sylvestr742008518 (3)ref|XP_004237858.1|7e-59PREDICTED: alkylated DNA repair protein alkB homolog 8 [Solanum lycopersicum]
JMSF023C07Sequence655013364 (3)ref|XP_009779634.1|3e-60PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Nicotiana sylvestr810008518 (3)ref|XP_004237858.1|2e-78PREDICTED: alkylated DNA repair protein alkB homolog 8 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023C07+ ACTTAAGTNCAGAAAATAGGAGGAGAAAAGCTGTAGAAGAACTAGTACGCAT
rJMSF016L15+ AAGCTGTAGAAGAACTAGTACGCAT
                      ____________________________________________________________
consensus ACTTAAGTNCAGAAAATAGGAGGAGAAAAGCTGTAGAAGAACTAGTACGCAT
 
. : . : . : . : . : . :
rJMSF023C07+ AGTTAAAAAGGGAGGCTTTGTATTGATTACAGTTTGGGCTAGGGAACAGGAAGATGGATC
rJMSF016L15+ AGTTAAAAAGGGAGGCTTTGTATTGATTACAGTTTGGGCTAGGGAACAGGAAGATGGATC
rJMSF021N12+ CTAGGGAACAGGAAGATGGATC
                      ____________________________________________________________
consensus AGTTAAAAAGGGAGGCTTTGTATTGATTACAGTTTGGGCTAGGGAACAGGAAGATGGATC
 
. : . : . : . : . : . :
rJMSF023C07+ ATTGGTTAACAAATGGACACCACTTACAGAGAAGTATTTGGAGGAATGGGTAGCACCAAG
rJMSF016L15+ ATTGGTTAACAAATGGACACCACTTACAGAGAAGTATTTGGAGGAATGGGTAGCACCAAG
rJMSF021N12+ ATTGGTTAACAAATGGACACCACTTACAGAGAAGTATTTGGAGGAATGGGTAGCACCAAG
                      ____________________________________________________________
consensus ATTGGTTAACAAATGGACACCACTTACAGAGAAGTATTTGGAGGAATGGGTAGCACCAAG
 
. : . : . : . : . : . :
rJMSF023C07+ CAGTCCTCGGATTCGCAATCCTTCCTCTCCTCGGACTCTAGCAAGCATCCCGGAGACTGA
rJMSF016L15+ CAGTCCTCGGATTCGCAATCCTTCCTCTCCTCGGACTCTAGCAAGCATCCCGGAGACTGA
rJMSF021N12+ CAGTCCTCGGATTCGCAATCCTTCCTCTCCTCGGACTCTAGCAAGCATCCCGGAGACTGA
                      ____________________________________________________________
consensus CAGTCCTCGGATTCGCAATCCTTCCTCTCCTCGGACTCTAGCAAGCATCCCGGAGACTGA
 
. : . : . : . : . : . :
rJMSF023C07+ GGAAAATGGCTCGGGAGTGAATAAATCAGCTGAAATTTCACATTCAGCAGTTCATGATAG
rJMSF016L15+ GGAAAATGGCTCGGGAGTGAATAAATCAGCTGAAATTTCACATTCAGCAGTTCATGATAG
rJMSF021N12+ GGAAAATGGCTCGGGAGTGAATAAATCAGCTGAAATTTCACATTCAGCAGTTCATGATAG
                      ____________________________________________________________
consensus GGAAAATGGCTCGGGAGTGAATAAATCAGCTGAAATTTCACATTCAGCAGTTCATGATAG
 
. : . : . : . : . : . :
rJMSF023C07+ AGGTCATTTGGATTCTGGAATTGAAAATGCTTCTATAGAGCAACAGGAATACTTTGTTCC
rJMSF016L15+ AGGTCATTTGGATTCTGGAATTGAAAATGCTTCTATAGAGCAACAGGAATACTTTGTTCC
rJMSF021N12+ AGGTCATTTGGATTCTGGAATTGAAAATGCTTCTATAGAGCAACAGGAATACTTTGTTCC
                      ____________________________________________________________
consensus AGGTCATTTGGATTCTGGAATTGAAAATGCTTCTATAGAGCAACAGGAATACTTTGTTCC
 
. : . : . : . : . : . :
rJMSF023C07+ TTGGCATTTACCTTATCATAGAGCTGAAGTAAGCGGGGCTTCTGCTTGTGCCCTCGCAAG
rJMSF016L15+ TTGGCATTTACCTTATCATAGAGCTGAAGTAAGCGGGGCTTCTGCTTGTGCCCTCGCAAG
rJMSF021N12+ TTGGCATTTACCTTATCATAGAGCTGAAGTAAGCGGGGCTTCTGCTTGTGCCCTCGCAAG
                      ____________________________________________________________
consensus TTGGCATTTACCTTATCATAGAGCTGAAGTAAGCGGGGCTTCTGCTTGTGCCCTCGCAAG
 
. : . : . : . : . : . :
rJMSF023C07+ TGGCCTGGCAAAGAAAGATGATAAAAAGGGTGCAGTTGTGTATAACAGATATTACCATGT
rJMSF016L15+ TGGCCTGGCAAAGAAAGATGATAAAAAGGGTGCAGTTGTGTATAACAGATATTACCATGT
rJMSF021N12+ TGGCCTGGCAAAGAAAGATGATAAAAAGGGTGCAGTTGTGTATAACAGATATTACCATGT
                      ____________________________________________________________
consensus TGGCCTGGCAAAGAAAGATGATAAAAAGGGTGCAGTTGTGTATAACAGATATTACCATGT
 
. : . : . : . : . : . :
rJMSF023C07+ TTTTAGTGAAGGTGAACTAGAAAGGTTGGTGTCTGGTTTGGATAATGCAGTCATTGTTGA
rJMSF016L15+ TTTTAGTGAAGGTGAACTAGAAAGGTTGGTGTCTGGTTTGGATAATGCAGTCATTGTTGA
rJMSF021N12+ TTTTAGTGAAGGTGAACTAGAAAGGTTGGTGTCTGGTTTGGATAATGCAGTCATTGTTGA
                      ____________________________________________________________
consensus TTTTAGTGAAGGTGAACTAGAAAGGTTGGTGTCTGGTTTGGATAATGCAGTCATTGTTGA
 
. : . : . : . : . : . :
rJMSF023C07+ TAGATTCTATGATAAATCAAATTGGTGCATCATACTCGAGAAGACATCCTGATAAAGTGA
rJMSF016L15+ TAGATTCTATGATAAATCAAATTGGTGCATCATACTCGAGAAGACATCCTGATAAAGTGA
rJMSF021N12+ TAGATTCTATGATAAATCAAATTGGTGCATCATACTCGAGAAGACATCCTGATAAAGTGA
                      ____________________________________________________________
consensus TAGATTCTATGATAAATCAAATTGGTGCATCATACTCGAGAAGACATCCTGATAAAGTGA
 
. : . : . : . : . : . :
rJMSF023C07+ CACCATAAAATACGATGACAATAAGACTACATAGATGTGTTCCGAGATTAGGGTGATTGA
rJMSF016L15+ CACCATAAAATACGATGACAATAAGACTACATAGATGTGTTCCGAGATTAGGGTGATTGA
rJMSF021N12+ CACCATAAAATACGATGACAATAAGACTACATAGATGTGTTCCGAGATTAGGGTGATTGA
                      ____________________________________________________________
consensus CACCATAAAATACGATGACAATAAGACTACATAGATGTGTTCCGAGATTAGGGTGATTGA
 
. : . : . : . : . : . :
rJMSF023C07+ ACATCGTGCTAATCTTTGCTGGGGTTGAGAAGTCATTGCAGGCTTTTCAACCAAGACCAG
rJMSF016L15+ ACATCGTGCTAATCTTTGCTGGGGTTGAGAAGTCATTGCAGGCTTTTCAACCAAGACCAG
rJMSF021N12+ ACATCGTGCTAATCTTTGCTGGGGTTGAGAAGTCATTGCAGGCTTTTCAACCAAGACCAG
                      ____________________________________________________________
consensus ACATCGTGCTAATCTTTGCTGGGGTTGAGAAGTCATTGCAGGCTTTTCAACCAAGACCAG
 
. : . : . : . : . : . :
rJMSF023C07+ CACATCCATACATTAGTCAATAAAACTACTGAAGGGGAGCTCTTTTTCTTATGGGAGACT
rJMSF016L15+ CACATCCATACATTAGTCAATAAAACTACTGAAGGGGAGCTCTTTTTCTTATGGGAGACT
rJMSF021N12+ CACATCCATACATTAGTCAATAAAACTACTGAAGGGGAGCTCTTTTTCTTATGGGAGACT
                      ____________________________________________________________
consensus CACATCCATACATTAGTCAATAAAACTACTGAAGGGGAGCTCTTTTTCTTATGGGAGACT
 
. : . : . : . : . : . :
rJMSF023C07+ TCTTTTATGCTTCTCTCCTTGCCTGTAATGTCTGAATG
rJMSF016L15+ TCTTTTATGCTTCTCTCCTTGCCTGTAATGTCTGAATG
rJMSF021N12+ TCTTTTATGCTTCTCTCCTTGCCTGTAATGTCTGAATGTACACTTCTCCCTCTTGTGATT
                      ____________________________________________________________
consensus TCTTTTATGCTTCTCTCCTTGCCTGTAATGTCTGAATGTACACTTCTCCCTCTTGTGATT