Contig 008513:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011B22Sequence351013348 (2)738008513 (2)ref|XP_009759488.1|1e-96PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri
JMSF021I03Sequence690013348 (2)ref|XP_011093490.1|1e-25PREDICTED: probable receptor-like protein kinase At5g47070 [Sesamum indicum] re749008513 (2)ref|XP_009759488.1|7e-100PREDICTED: probable receptor-like protein kinase At5g47070 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF011B22+                                                    TACAGCGGTTGTAGGAAC
rJMSF021I03+                                         ACTCATGTTTNTACAGCGGTTGTAGGAAC
                      ____________________________________________________________
consensus                                            ACTCATGTTTNTACAGCGGTTGTAGGAAC
 
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rJMSF011B22+          ACATGGTTATGCAGCCCCCGATTACATCGAAACTGGTCACCTTACAACTAAGAGTGATGT
rJMSF021I03+          ACATGGTTATGCAGCCCCCGATTACATCGAAACTGGTCACCTTACAGCTAAGAGTGATGT
                      ____________________________________________________________
consensus             ACATGGTTATGCAGCCCCCGATTACATCGAAACTGGTCACCTTACAGCTAAGAGTGATGT
 
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rJMSF011B22+          TTGGAGCTTCGGTGTCGTACTATACGAGATCCTATCGGGTAGAAGATCACTCGACAGAAA
rJMSF021I03+          TTGGAGCTTCGGTGTCGTACTATACGAGATCCTATCGGGTAGAAGATCACTCGACAGAAA
                      ____________________________________________________________
consensus             TTGGAGCTTCGGTGTCGTACTATACGAGATCCTATCGGGTAGAAGATCACTCGACAGAAA
 
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rJMSF011B22+          CAGGCCTAGATCAGAACAAAAACTCTTGGAATGGGTTAAGCACTATCCTGCTGACAGTCG
rJMSF021I03+          CAGGCCTAGATCAGAACAAAAACTCTTGGAATGGGTTAAGCACTATCCTGCTGACAGTCG
                      ____________________________________________________________
consensus             CAGGCCTAGATCAGAACAAAAACTCTTGGAATGGGTTAAGCACTATCCTGCTGACAGTCG
 
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rJMSF011B22+          GAAATTCAGCACGATAATGGACCCGAGACTGGAAAATCAGTATTCACTAGGAGCAGCTCG
rJMSF021I03+          GAAATTCAGCACGATAATGGACCCGAGACTGGAAAATCAGTATTCACTAGGAGCAGCTCG
                      ____________________________________________________________
consensus             GAAATTCAGCACGATAATGGACCCGAGACTGGAAAATCAGTATTCACTAGGAGCAGCTCG
 
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rJMSF011B22+          AAAGGTTGCAAAGTTAGCAGATGCGTGTTTGTCCAAGAATTCAAAGGAACGGCCCAAAAT
rJMSF021I03+          AAAGGTTGCAAAGTTAGCAGATGCGTGTTTGTCCAAGAATTCAAAGGAACGGCCCAAAAT
                      ____________________________________________________________
consensus             AAAGGTTGCAAAGTTAGCAGATGCGTGTTTGTCCAAGAATTCAAAGGAACGGCCCAAAAT
 
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rJMSF011B22+          GAGCCAAGTCGTGGAATCCTTGAAACAGATCATTCAGAGCTGTGGCGGCGAGAGTAGCCC
rJMSF021I03+          GAGCCAAGTCGTGGAATCCTTGAAACAGATCATTCAGAGCTGTGGCGGCGAGAGTAGCCC
                      ____________________________________________________________
consensus             GAGCCAAGTCGTGGAATCCTTGAAACAGATCATTCAGAGCTGTGGCGGCGAGAGTAGCCC
 
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rJMSF011B22+          CTCCTTGCACAAGAGTTTCGAGTGCGTGGAAGATGATCCAGTTGACGACGAGAAACCCAA
rJMSF021I03+          CTCCTTGCACAAGAGTTTCGAGTGCGTGGAAGATGATCCAGTTGACGACGAGAAACCCAA
                      ____________________________________________________________
consensus             CTCCTTGCACAAGAGTTTCGAGTGCGTGGAAGATGATCCAGTTGACGACGAGAAACCCAA
 
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rJMSF011B22+          GCAGATGGGACCCGCGGAATCAGCGAAAAGGCGGATGGCACAGTTGGCCAAGCTAAGTGA
rJMSF021I03+          GCAGATGGGACCCGCGGAATCAGCGAAGAGGCGGATGGCACAGTTGGCCAAGCTAAGTGA
                      ____________________________________________________________
consensus             GCAGATGGGACCCGCGGAATCAGCGAAGAGGCGGATGGCACAGTTGGCCAAGCTAAGTGA
 
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rJMSF011B22+          ACATGTTGGTGGAATCAGCAGAAGAAGGTTTATGATGATGCAGAGAGCCAAAGTTACATG
rJMSF021I03+          ACATGTTGGTGGAATCAGCAGAAGAAGGTTTATGATGATGCAGAGAGCCAAAGTTACATG
                      ____________________________________________________________
consensus             ACATGTTGGTGGAATCAGCAGAAGAAGGTTTATGATGATGCAGAGAGCCAAAGTTACATG
 
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rJMSF011B22+          ATAAAAGGCAAGCATGCATTTTTTTTTAATGTGAAAGCTTCAAATATGAAGGAAATTTGA
rJMSF021I03+          ATAAAAGGCAAGCATGCATTTTTTTTTAATGTGAAAGCTTCAAATATGAAGGAAATTTGA
                      ____________________________________________________________
consensus             ATAAAAGGCAAGCATGCATTTTTTTTTAATGTGAAAGCTTCAAATATGAAGGAAATTTGA
 
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rJMSF011B22+          TGTTTCTATCAATCTGAAACAACGTTAACAAGACCACGAAACACATGTTCAAAGTAGTGT
rJMSF021I03+          TGTTTCTATCAATCTGAAACAACGTTAACAAGACCACGAAACACATGTTCAAAGTAGTGT
                      ____________________________________________________________
consensus             TGTTTCTATCAATCTGAAACAACGTTAACAAGACCACGAAACACATGTTCAAAGTAGTGT
 
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rJMSF011B22+          CACAGGTCTCAGGTTGTAGCCATATGTATGCCCATCTTGGCTGTTTGTTTATGT      
rJMSF021I03+          CACAGGTCTCAGGTTGTAGCCATATGTATGCCCATCTTGGCTGTTTGTTTATGTTGGGCC
                      ____________________________________________________________
consensus             CACAGGTCTCAGGTTGTAGCCATATGTATGCCCATCTTGGCTGTTTGTTTATGTTGGGCC