| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003K19 | Sequence | 377 | 007882 (6) | ref|XP_010102017.1| | 4e-64 | hypothetical protein L484_016307 [Morus notabilis] gb|EXB91237.1| hypothetical p | 705 | 008511 (6) | gb|KDO58315.1| | 2e-60 | hypothetical protein CISIN_1g0085681mg, partial [Citrus sinensis] |
| JMSF021C09 | Sequence | 717 | 007882 (6) | ref|XP_004251075.1| | 3e-78 | PREDICTED: nicalin-1-like [Solanum lycopersicum] | 784 | 008511 (6) | gb|KDO58315.1| | 7e-62 | hypothetical protein CISIN_1g0085681mg, partial [Citrus sinensis] |
| JMSF021D06 | Sequence | 642 | 007882 (6) | gb|EYU36051.1| | 2e-62 | hypothetical protein MIMGU_mgv1a003633mg [Erythranthe guttata] | 779 | 008511 (6) | gb|KDO58315.1| | 7e-61 | hypothetical protein CISIN_1g0085681mg, partial [Citrus sinensis] |
| JMSF023C04 | Sequence | 684 | 007882 (6) | gb|EYU36051.1| | 3e-62 | hypothetical protein MIMGU_mgv1a003633mg [Erythranthe guttata] | 775 | 008511 (6) | gb|KDO58315.1| | 1e-72 | hypothetical protein CISIN_1g0085681mg, partial [Citrus sinensis] |
| JMSF041B18 | Sequence | 649 | 007882 (6) | gb|EYU36051.1| | 2e-62 | hypothetical protein MIMGU_mgv1a003633mg [Erythranthe guttata] | 650 | 008511 (6) | ref|XP_009793459.1| | 7e-33 | PREDICTED: nicalin-1-like isoform X2 [Nicotiana sylvestris] |
| JMSF049I12 | Sequence | 641 | 007882 (6) | gb|EYU36051.1| | 3e-62 | hypothetical protein MIMGU_mgv1a003633mg [Erythranthe guttata] | 775 | 008511 (6) | gb|KDO58315.1| | 3e-73 | hypothetical protein CISIN_1g0085681mg, partial [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF049I12+ AT
rJMSF023C04+ T
____________________________________________________________
consensus AT
. : . : . : . : . : . :
rJMSF049I12+ TCAGGGTGTCAAGCTTGTTGCCAAAAGTTTAGCCAAGCACATNTACGGCCATGAGGGGAA
rJMSF023C04+ TCAGGGTGTCAAGCTTGNTGCCAAAAGTTTAGCCAAGCACATCTACGGCCATGAGGGGAA
____________________________________________________________
consensus TCAGGGTGTCAAGCTTGTTGCCAAAAGTTTAGCCAAGCACATCTACGGCCATGAGGGGAA
. : . : . : . : . : . :
rJMSF049I12+ GAACATTAACATATTTGCAGATGGTAGTAGCTTAGCTATCAATCCCTTTTATATACGTTC
rJMSF023C04+ GAACATTAACATATTTGCAGATGGTAGTAGCTTAGCTATCAATCCCTTTTATATACGTTC
rJMSF003K19+ CATTAACATATTTGCAGATGGTAGTAGCTTAGCTATCAATCCCTTTTATATACGTTC
rJMSF021D06+ CATTAACATATTTGCAGATGGTAGTAGCTTAGCTATCAATCCCTTTTATATACGTTC
rJMSF021C09+ TAACATATTTGCAGATGGTAGTAGCTTAGCTATCAATCCCTTTTATATACGTTC
____________________________________________________________
consensus GAACATTAACATATTTGCAGATGGTAGTAGCTTAGCTATCAATCCCTTTTATATACGTTC
. : . : . : . : . : . :
rJMSF049I12+ TTGGATGGATCTGCTATCAACAACACCTCGAGTGGCACCATTCCTCTCAAAAAATGATCC
rJMSF023C04+ TTGGATGGATCTGCTATCAACAACACCTCGAGTGGCACCATTCCTCTCAAAAAATGATCC
rJMSF003K19+ TTGGATGGATCTGCTATCAACAACACCTCGAGTGGCACCATTCCTCTCAAAAAATGATCC
rJMSF021D06+ TTGGATGGATCTGCTATCAACAACACCTCGAGTGGCACCATTCCTCTCAAAAAATGATCC
rJMSF021C09+ TTGGATGGATCTGCTATCAACAACACCTCGAGTGGCACCATTCCTCTCAAAAAATGATCC
____________________________________________________________
consensus TTGGATGGATCTGCTATCAACAACACCTCGAGTGGCACCATTCCTCTCAAAAAATGATCC
. : . : . : . : . : . :
rJMSF049I12+ ACTTATCATGGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
rJMSF023C04+ ACTTATCATGGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
rJMSF003K19+ ACTTATCATGGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
rJMSF021D06+ ACTTATCATGGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
rJMSF041B18+ GGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
rJMSF021C09+ ACTTATCATGGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
____________________________________________________________
consensus ACTTATCATGGCATTAAAAAAGGAATTAGCTGATCATACTGCTGATGTCAGTGTACAGCA
. : . : . : . : . : . :
rJMSF049I12+ TGAGGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
rJMSF023C04+ TGAGGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
rJMSF003K19+ TGAGGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
rJMSF021D06+ TGAGGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
rJMSF041B18+ TGAAGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
rJMSF021C09+ TGAAGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
____________________________________________________________
consensus TGAGGTGCTTGATGGAATGTTCACCTTTTACGACTCAACAAGTAGCAAATTGCATATATA
. : . : . : . : . : . :
rJMSF049I12+ TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
rJMSF023C04+ TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
rJMSF003K19+ TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
rJMSF021D06+ TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
rJMSF041B18+ TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
rJMSF021C09+ TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
____________________________________________________________
consensus TCAGGTTGCCAGCGTGACATTCGACTTGCTTTTGCTATTAGCGCTAGGATCATACTTGAT
. : . : . : . : . : . :
rJMSF049I12+ TACCCTTTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
rJMSF023C04+ TACCCTNTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
rJMSF003K19+ TACCCTTTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
rJMSF021D06+ TACCCTTTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
rJMSF041B18+ TACCCTTTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
rJMSF021C09+ TACCCTTTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
____________________________________________________________
consensus TACCCTTTTCTGTTTTCTAGTAATCACAACCAGGGGTCTTGATGATCTCATCAGTATATT
. : . : . : . : . : . :
rJMSF049I12+ TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
rJMSF023C04+ TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
rJMSF003K19+ TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
rJMSF021D06+ TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
rJMSF041B18+ TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
rJMSF021C09+ TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
____________________________________________________________
consensus TCGCCGACCACCCTCCCGAAAGGTGAAAACTGCCTAATTAGTGAAGCAGGATTTATAGCA
. : . : . : . : . : . :
rJMSF049I12+ GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
rJMSF023C04+ GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
rJMSF003K19+ GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
rJMSF021D06+ GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
rJMSF041B18+ GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
rJMSF021C09+ GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
____________________________________________________________
consensus GAGGGGAGTGGGAATCATGGCAGATTTGGCAGGGTAGTCTGGCTTTTCTTGGCCCAAAGT
. : . : . : . : . : . :
rJMSF049I12+ AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCACTAGAAG
rJMSF023C04+ AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCNCTAGAAG
rJMSF003K19+ AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCACTAGAAG
rJMSF021D06+ AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCACTAGAAG
rJMSF041B18+ AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCACTAGAAG
rJMSF021C09+ AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCACTAGAAG
____________________________________________________________
consensus AAAATTTGCCTCGTCAGTTTTCATACTCGTTTCTAGTTCAATCGAAGTACCCACTAGAAG
. : . : . : . : . : . :
rJMSF049I12+ TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
rJMSF023C04+ TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
rJMSF003K19+ TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
rJMSF021D06+ TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
rJMSF041B18+ TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
rJMSF021C09+ TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
____________________________________________________________
consensus TGAAAAAAAAATTGTGCTAAAAAGGAGATATCCGGTCTAACTTTGGAGGATGGAGGGAAT
. : . : . : . : . : . :
rJMSF049I12+ TAGTTTTCTGATAACAAATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
rJMSF023C04+ TAGTTTTCTGATAACAAATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
rJMSF003K19+ TAGTTTTCTGATAACAAATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
rJMSF021D06+ TAGTTTTCTGATAACAAATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
rJMSF041B18+ TAGTTTTCTGATAAC-AATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
rJMSF021C09+ TAGTTTTCTGATAAC-AATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
____________________________________________________________
consensus TAGTTTTCTGATAACAAATTTTGTTGTGTACTGTGTAATCTTATTGCCTGGCTTTTCAAT
. : . : . : . : . : . :
rJMSF049I12+ AGGGCCCTGCATTTTTAGCCACATTTTTATAAGGGTTTTGTAATTTT
rJMSF023C04+ AGGGCCCTGCATTTTTAGCCACATNTTTATAAGGGTTTTGTAATTTT
rJMSF003K19+ AGGGCCCTGCATTTTTAGCCACATTTTTATAAGGGTTTTGTAATTTTT
rJMSF021D06+ AGGGCCCTGCATTTTTAGCCACATTTTTATAAGGGTTTTGTAATTTTTGTTTGCTTGTTT
rJMSF041B18+ AGGGCCCTGCATTTTTAGCCACATTTTTATAAGGGTTTTGTAATTTTTGTTTGCTTGTTT
rJMSF021C09+ AGGGCCCTGCATTTTTAGCCACATTTTTATAAGGGTTTTGTAATTTTTGTTTGCTTGTTT
____________________________________________________________
consensus AGGGCCCTGCATTTTTAGCCACATTTTTATAAGGGTTTTGTAATTTTTGTTTGCTTGTTT
. : . : . : . : . : . :
rJMSF021D06+ TAGGAAGTTAAAAGACAGGTTGGAAGAAATGATTAATGACTACTTTGATAAACTCTAACT
rJMSF041B18+ TAGGAAGTTAAAAGACAGGTTGGAAGAAATGATTAATGACTACTTTGATAAACTCTAACT
rJMSF021C09+ TAGGAAGTTAAAAGACAGGTTGGAAGAAATGATTAATGACTACTTTGATAAACTCTAACT
____________________________________________________________
consensus TAGGAAGTTAAAAGACAGGTTGGAAGAAATGATTAATGACTACTTTGATAAACTCTAACT