Contig 008510:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN016J22Sequence576008510 (3)
JMSF020O03Sequence678006653 (17)781008510 (3)gb|KDP31435.1|1e-09hypothetical protein JCGZ_11811 [Jatropha curcas]
JMSF052M24Sequence614006653 (17)ref|XP_006348608.1|7e-51PREDICTED: ASC1-like protein-like [Solanum tuberosum]868008510 (3)ref|XP_009605053.1|81.3PREDICTED: uncharacterized protein LOC104099690 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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rJMSF052M24+                             TGTGATATACAATTAATTATCTGGTTGACATGAGAGATTTT
                      ____________________________________________________________
consensus                                TGTGATATACAATTAATTATCTGGTTGACATGAGAGATTTT
 
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rJMSF052M24+          GTTGCATTTGTGCAGGGAATAGGGCCTCTTAGAAGATGGAAGACATCTTGACAGATATTC
                      ____________________________________________________________
consensus             GTTGCATTTGTGCAGGGAATAGGGCCTCTTAGAAGATGGAAGACATCTTGACAGATATTC
 
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rJMSF052M24+          CTCCACCCTCAAGGTTGTTCTTGGAAGATGTCTTTGCCCCGCGATTGAAGCATCCTCTTC
                      ____________________________________________________________
consensus             CTCCACCCTCAAGGTTGTTCTTGGAAGATGTCTTTGCCCCGCGATTGAAGCATCCTCTTC
 
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rJMSF052M24+          CGTCTCCATTCCTGTTGTTTTCTACACCTAACGCTGAGAAATATTCTCACCCCTCTCTCC
                      ____________________________________________________________
consensus             CGTCTCCATTCCTGTTGTTTTCTACACCTAACGCTGAGAAATATTCTCACCCCTCTCTCC
 
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rJMSF052M24+          TTATAATTGCAATGTCTTTTTACTTTTTTCACCATTTGTCTTCCAAAATCTTTGTTGGAA
                      ____________________________________________________________
consensus             TTATAATTGCAATGTCTTTTTACTTTTTTCACCATTTGTCTTCCAAAATCTTTGTTGGAA
 
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rJMSF052M24+          CACTTATCCTACCTGAGATTGATGTTTGTAGTCTCAGTCCAATATCCGATCACTGCAGAG
                      ____________________________________________________________
consensus             CACTTATCCTACCTGAGATTGATGTTTGTAGTCTCAGTCCAATATCCGATCACTGCAGAG
 
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rJMSF052M24+          AGATCTGATGCAGTGGCAAAGCTTTAGGGGTAAGCTTCCAGCCGATGAAACACTTGCGTT
JMFN016J22-                                        GTAAGCTTCCAGCCGATGAAACACTTGCGTT
                      ____________________________________________________________
consensus             AGATCTGATGCAGTGGCAAAGCTTTAGGGGTAAGCTTCCAGCCGATGAAACACTTGCGTT
 
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rJMSF052M24+          CAAGCTGGAGACATCATTAGAGAGAGAAGGGTAAGCTAAAGGGCGATAGCGCTTCTGGAA
JMFN016J22-           CAAGCTGGAGACATCATTAGAGAGAGAAGGGTAAGCTAAAGGGCGATAGCGCTTCTGGAA
rJMSF020O03+                                                                     A
                      ____________________________________________________________
consensus             CAAGCTGGAGACATCATTAGAGAGAGAAGGGTAAGCTAAAGGGCGATAGCGCTTCTGGAA
 
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rJMSF052M24+          ATTATGGAATTTCCGACTACTTGAAAGTGATCTTAAATCAAATCGAAAGCCTTGTTTCGA
JMFN016J22-           ATTATGGAATTTCCGACTACTTGAAAGTGATCTTAAATCAAATCGAAAGCCTTGTTTCGA
rJMSF020O03+          ATTATGGAATTTCCGACTACCTGAAAGTGATCTTAAATCAAATCGAAAGCCTTGTTTCGA
                      ____________________________________________________________
consensus             ATTATGGAATTTCCGACTACTTGAAAGTGATCTTAAATCAAATCGAAAGCCTTGTTTCGA
 
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rJMSF052M24+          CCACTTTTGGTATCCGGAAAAACCTTTGTTGCTATTTTTGACCACTTTTTGCTTTCTACT
JMFN016J22-           CCACTTTTGGTATCCGGAAAAACCTTTGTTGCTATTTTTGACCACTTTTTGCTTTCTACT
rJMSF020O03+          CCACTTTTGGTATCCGGAAAAACCTTTGTTGCTATTTTTGACCACTTTTTGCTTTCTACT
                      ____________________________________________________________
consensus             CCACTTTTGGTATCCGGAAAAACCTTTGTTGCTATTTTTGACCACTTTTTGCTTTCTACT
 
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rJMSF052M24+          TGATTTAAAATCACTTTCAGGTGGTCGAAAATTCCATAATTTTCAGC             
JMFN016J22-           TGATTTAAAATCACTTTCAGGTGGTCGAAAATTTCATAATTTTCAGCGGTGGCCATGATG
rJMSF020O03+          TGATTTAAAATCACTTTCAGGTGGTCGAAAATTTCATAATTTTCAGCGGTGGCCATGATG
                      ____________________________________________________________
consensus             TGATTTAAAATCACTTTCAGGTGGTCGAAAATTTCATAATTTTCAGCGGTGGCCATGATG
 
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JMFN016J22-           ATTCTCGGTTGGTTAGACTATTTCCCATCAGGAAGTGTAGTGGATGGCTTGGCTGCCGCA
rJMSF020O03+          ATTCTCGGTTGGTTAGACTATTTCCCATCAGGAAGTGTAGTGGATGGCTTGGCTGCCGCA
                      ____________________________________________________________
consensus             ATTCTCGGTTGGTTAGACTATTTCCCATCAGGAAGTGTAGTGGATGGCTTGGCTGCCGCA
 
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JMFN016J22-           CTATTGGGCAGTGTGTGTTTCATGGCCTCAACCTTCTGTGAAATCTTCGCTGCTCAAGGA
rJMSF020O03+          CTATTGGGCAGTGTGTGTTTCATGGCCTCAACCTTCTGTGAAATCTTCGCTGCTCAAGGA
                      ____________________________________________________________
consensus             CTATTGGGCAGTGTGTGTTTCATGGCCTCAACCTTCTGTGAAATCTTCGCTGCTCAAGGA
 
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JMFN016J22-           TGTCTTACCGGGAATGGATCATATGACTTTGCTTGGACTTGGCGTAGTAAAGATTATCTT
rJMSF020O03+          TGTCTTACCGGGAATGGATCATATGACTTTGCTTGGACTTGGCGTAGTAAAGATTATCTT
                      ____________________________________________________________
consensus             TGTCTTACCGGGAATGGATCATATGACTTTGCTTGGACTTGGCGTAGTAAAGATTATCTT
 
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JMFN016J22-           CTTGATTCTGATCCGTACACCTGATATTTAGATTTTAACAAGAACTGTCTTAATTATTTC
rJMSF020O03+          CTTGATTCTGATCCGTACACCTGATATTTAGATTTTAACAAGAACTGTCTTAATTATTTC
                      ____________________________________________________________
consensus             CTTGATTCTGATCCGTACACCTGATATTTAGATTTTAACAAGAACTGTCTTAATTATTTC
 
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JMFN016J22-           AACATTCTATATTTTCCCTTTAATTTGTTTCAGACATTCCAGTTTCATTTTCTTGCCAAC
rJMSF020O03+          AACATTCTATATTTTCCCTTTAATTTGTTTCAGACATTCCAGTTTCATTTTCTTGCCAAC
                      ____________________________________________________________
consensus             AACATTCTATATTTTCCCTTTAATTTGTTTCAGACATTCCAGTTTCATTTTCTTGCCAAC
 
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JMFN016J22-           ATTAG                                                       
rJMSF020O03+          ATTAGTTACATCCTCTATTGACTCTCTACACATGTTTACAAGGTCTCATCAGATCAGCTT
                      ____________________________________________________________
consensus             ATTAGTTACATCCTCTATTGACTCTCTACACATGTTTACAAGGTCTCATCAGATCAGCTT
 
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rJMSF020O03+          GCACAGTTAGTTGTACCCCAACAACGTAAGACGGTGAAAAACATCATGGATCTTTTCGGG
                      ____________________________________________________________
consensus             GCACAGTTAGTTGTACCCCAACAACGTAAGACGGTGAAAAACATCATGGATCTTTTCGGG
 
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rJMSF020O03+          TTGCGATGGGTGGGTTTTGTTGGATGATACGGAGACACTAAAAGGAGAGAAAGGGAGCTC
                      ____________________________________________________________
consensus             TTGCGATGGGTGGGTTTTGTTGGATGATACGGAGACACTAAAAGGAGAGAAAGGGAGCTC
 
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rJMSF020O03+          CGGAGAACAAAGATGCATTGAAAGGGTTCGGAATCATTGACAAGATCAAGAACTCAATTG
                      ____________________________________________________________
consensus             CGGAGAACAAAGATGCATTGAAAGGGTTCGGAATCATTGACAAGATCAAGAACTCAATTG
 
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rJMSF020O03+          AATCTGAATGTTCGGGGATTGTATCATGTGCTCACATTTTTANCTGTGATGCCGATGTGA
                      ____________________________________________________________
consensus             AATCTGAATGTTCGGGGATTGTATCATGTGCTCACATTTTTANCTGTGATGCCGATGTGA