Contig 008508:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF020G11-                                                            GGGTCATTGAT
                      ____________________________________________________________
consensus                                                              GGGTCATTGAT
 
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JMSF020G11-           AGCAAGTCAATTGCCGGGACGAACAGATAACGAAATCAAGAATTACTGGAACTCTCATCT
rJMSF020G11+                                                                    CT
                      ____________________________________________________________
consensus             AGCAAGTCAATTGCCGGGACGAACAGATAACGAAATCAAGAATTACTGGAACTCTCATCT
 
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JMSF020G11-           CAGCCGCAAAATTTACAGTTT-CCGGTTGAGCATCAACGCCCCCATGGCGGTGCAAGTGG
rJMSF020G11+          CAGCCGCAAAATTTACAGTTTCCCGGTTGAGCATCAACGCCCCCATGGCNGTGCAAGTGG
                      ____________________________________________________________
consensus             CAGCCGCAAAATTTACAGTTTCCCGGTTGAGCATCAACGCCCCCATGGCGGTGCAAGTGG
 
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JMSF020G11-           CGGAGGACGCGGCGGCTGCACGGCGGAGAAGAGGAGGGCGTGTAAGCCGATCCGTCGCCA
rJMSF020G11+          CGGAGGACGCGGCGGCTGCACGGCGGAGAAGAGGAGGGCGTGTAAGCCGATCCGTCGCCA
                      ____________________________________________________________
consensus             CGGAGGACGCGGCGGCTGCACGGCGGAGAAGAGGAGGGCGTGTAAGCCGATCCGTCGCCA
 
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JMSF020G11-           AAAAGTACAACACCGCATCCTTCCACGTCGCAACCGCGTCTTTTAGAAATAAACACAAGC
rJMSF020G11+          AAAAGTACAACACCGCATCCTTCCACGTCGCAACCGCGTCTTTTAGAAATAAACACAAGC
                      ____________________________________________________________
consensus             AAAAGTACAACACCGCATCCTTCCACGTCGCAACCGCGTCTTTTAGAAATAAACACAAGC
 
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JMSF020G11-           CCCCCGGCAGTCAAGGATCCAGTTCGGCGGTCCACAACAGCGACGGCGGGACCGCCATTA
rJMSF020G11+          CCCCCGGCAGTCAAGGATCCAGTTCGGCGGTCCACAACAGCGACGGCGGGACCGCCATTA
                      ____________________________________________________________
consensus             CCCCCGGCAGTCAAGGATCCAGTTCGGCGGTCCACAACAGCGACGGCGGGACCGCCATTA
 
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JMSF020G11-           ATGCCTCGGAGGGCTCCGGAAAGGACGGGAAAGCGTTCGCCCCCAAAGGACGCGCTGAAA
rJMSF020G11+          ATGCCTCGGAGGGCTCCGGAAAGGACGGGAAAGCGTTCGCCCCCAAAGGACGCGCTGAAA
                      ____________________________________________________________
consensus             ATGCCTCGGAGGGCTCCGGAAAGGACGGGAAAGCGTTCGCCCCCAAAGGACGCGCTGAAA
 
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JMSF020G11-           ACGATGTCTTCTCGCCTGAGCCGTGCGACAATCGACAACTTGACTGCCAGGTGTTCGATG
rJMSF020G11+          ACGATGTCTTCTCGCCTGAGCCGTGCGACAATCGACAACTTGACTGCCAGGTGTTCGATG
                      ____________________________________________________________
consensus             ACGATGTCTTCTCGCCTGAGCCGTGCGACAATCGACAACTTGACTGCCAGGTGTTCGATG
 
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JMSF020G11-           AAATGACCCGTGAAGAAGATGCGAGTGGGGCTTTATTAGCAATAAATGGTGGGAGGGGGG
rJMSF020G11+          AAATGACCCGTGAAGAAGATGCGAGTGGGGCTTTATTAGCAATAAATGGTGGGA-GGGGG
                      ____________________________________________________________
consensus             AAATGACCCGTGAAGAAGATGCGAGTGGGGCTTTATTAGCAATAAATGGTGGGAGGGGGG
 
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JMSF020G11-           AGGGGGCACCCTTCGGAAAGTGGTCCTGAGCCGGAGAGTGAAGGCTACAGCGACGGCCAG
rJMSF020G11+          AGGGGGCACCCTTCGGAAAGTGGTCCTGAGCCGGAGAGTGAAGGCTACAGCGACGGCCAG
                      ____________________________________________________________
consensus             AGGGGGCACCCTTCGGAAAGTGGTCCTGAGCCGGAGAGTGAAGGCTACAGCGACGGCCAG
 
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JMSF020G11-           ACTGCAGCAACCACGACCCTGGGAATGTACACTTACCAGTTGCCGGCTCCCGGCGACTCC
rJMSF020G11+          ACTGCAGCAACCACGACCCTGGGAATGTACACTTACCAGTTGCCGGCTCCCGGCGACTCC
                      ____________________________________________________________
consensus             ACTGCAGCAACCACGACCCTGGGAATGTACACTTACCAGTTGCCGGCTCCCGGCGACTCC
 
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JMSF020G11-           ATCTTCGACG                                                  
rJMSF020G11+          ATCTTCGACGACGACGATTGGGTGAACTGGAGTTTGGGTGATGATGCGTTTCAAGGATAT
                      ____________________________________________________________
consensus             ATCTTCGACGACGACGATTGGGTGAACTGGAGTTTGGGTGATGATGCGTTTCAAGGATAT
 
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rJMSF020G11+          GATGAGTTCTGGGATGGCTTAGATGACATGTTCGCGTGGCCCTGGGATGATAATACTAAT
                      ____________________________________________________________
consensus             GATGAGTTCTGGGATGGCTTAGATGACATGTTCGCGTGGCCCTGGGATGATAATACTAAT
 
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rJMSF020G11+          ACTAATACAGCTAATGGTTCATGAAATACTACTAGCAACCTGCATGGGAAGATGATTGTG
                      ____________________________________________________________
consensus             ACTAATACAGCTAATGGTTCATGAAATACTACTAGCAACCTGCATGGGAAGATGATTGTG
 
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rJMSF020G11+          TTTGGTAATTGTATGTTAGTTAAGCCATAATTGTGTTTTAGACCCATAATTACTTAAGTT
                      ____________________________________________________________
consensus             TTTGGTAATTGTATGTTAGTTAAGCCATAATTGTGTTTTAGACCCATAATTACTTAAGTT