Contig 008505:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019N05Sequence562008505 (2)emb|CBI28297.3|3e-29unnamed protein product [Vitis vinifera]743008505 (2)ref|XP_006425602.1|3e-16hypothetical protein CICLE_v10026940mg, partial [Citrus clementina] gb|ESR38842.

Alignment

This contig is upended


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JMSF019N05-                            GGCTTACATCGCTAGGGTTCTTCAGCCTCAACAGCAGCTCAGC
                      ____________________________________________________________
consensus                              GGCTTACATCGCTAGGGTTCTTCAGCCTCAACAGCAGCTCAGC
 
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JMSF019N05-           TTCTACAGCTCTCTTCCACCCACCTGAAGCCATGTCAAGGAGAAAGACCAGAGAGCCCAA
                      ____________________________________________________________
consensus             TTCTACAGCTCTCTTCCACCCACCTGAAGCCATGTCAAGGAGAAAGACCAGAGAGCCCAA
 
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JMSF019N05-           GGAGGAGAATGTGACCCTTGGACCTGCCATTAGGGAAGGGGAATTGGTGTTTGGTGTTGC
                      ____________________________________________________________
consensus             GGAGGAGAATGTGACCCTTGGACCTGCCATTAGGGAAGGGGAATTGGTGTTTGGTGTTGC
 
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JMSF019N05-           CCACATTTTTGCATCATTCAATGACACATTCATTCACGTTACTGATTTGTCTGGCCGGGA
                      ____________________________________________________________
consensus             CCACATTTTTGCATCATTCAATGACACATTCATTCACGTTACTGATTTGTCTGGCCGGGA
 
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JMSF019N05-           AACACTGGTTCGCATCACTGGTATGTTGGGAACATCTTTTGTTCGTTTCTTTACTACTGT
                      ____________________________________________________________
consensus             AACACTGGTTCGCATCACTGGTATGTTGGGAACATCTTTTGTTCGTTTCTTTACTACTGT
 
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JMSF019N05-           TATTGTTCCATTTATGGTTTTTTGATTTAGTCAATTTTGCCAACACCCCTTTTTGCATTC
                      ____________________________________________________________
consensus             TATTGTTCCATTTATGGTTTTTTGATTTAGTCAATTTTGCCAACACCCCTTTTTGCATTC
 
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JMSF019N05-           TAAAACTAACCTTACAGATATGATTCTGGCACAAGTTACTCTTAGGCTTTTAAAACTAAA
                      ____________________________________________________________
consensus             TAAAACTAACCTTACAGATATGATTCTGGCACAAGTTACTCTTAGGCTTTTAAAACTAAA
 
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JMSF019N05-           CTTATAATCCATTCGTCATCTTAATTGTCTAATATACTCTTCTATCCTTTAAATAATTTC
                      ____________________________________________________________
consensus             CTTATAATCCATTCGTCATCTTAATTGTCTAATATACTCTTCTATCCTTTAAATAATTTC
 
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JMSF019N05-           GTGGGTAATGATCCTTGACTGCAGGTGGAATGAAGGTCAAGGCTGACAGAGATGAATCTT
rJMSF019N05+                                 GGTGGAATGAAGGTCAAGGCTGACAGAGATGAATCTT
                      ____________________________________________________________
consensus             GTGGGTAATGATCCTTGACTGCAGGTGGAATGAAGGTCAAGGCTGACAGAGATGAATCTT
 
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JMSF019N05-           CTCCATATGCAGCTATGCTTGCAGCACAAGATGTGTCTC                     
rJMSF019N05+          CTCCATATGCAGCTATGCTTGCAGCACAAGATGTGTCTCAACGATGCAAGGTAGCCTGTT
                      ____________________________________________________________
consensus             CTCCATATGCAGCTATGCTTGCAGCACAAGATGTGTCTCAACGATGCAAGGTAGCCTGTT
 
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rJMSF019N05+          GTTCCTTTTTTAATGTGTTGAACTGTAGGCTCTCTTTACGTAACTTTGTCTTTCTAGCCT
                      ____________________________________________________________
consensus             GTTCCTTTTTTAATGTGTTGAACTGTAGGCTCTCTTTACGTAACTTTGTCTTTCTAGCCT
 
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rJMSF019N05+          CAGTTTAAACAGTTATTATGTATGTTAAGTGCTAGTAAACATTGTTTCAAGTCGTGATAT
                      ____________________________________________________________
consensus             CAGTTTAAACAGTTATTATGTATGTTAAGTGCTAGTAAACATTGTTTCAAGTCGTGATAT
 
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rJMSF019N05+          AACAATGAAATATATTTTATTTTTTTTCTTATAAGATTTCATCCTTTTATGTCTGCTTTG
                      ____________________________________________________________
consensus             AACAATGAAATATATTTTATTTTTTTTCTTATAAGATTTCATCCTTTTATGTCTGCTTTG
 
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rJMSF019N05+          GAGACTGACTTAGCAGTTGATAATATTGCAGGAGCTCGGGATTACAGCTCTTCACATTAA
                      ____________________________________________________________
consensus             GAGACTGACTTAGCAGTTGATAATATTGCAGGAGCTCGGGATTACAGCTCTTCACATTAA
 
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rJMSF019N05+          GCTTCGAGCTACAGGTGGTAACAAGACCAAGACTCCCGGTCCAGGTGCTCAGTCTGCTCT
                      ____________________________________________________________
consensus             GCTTCGAGCTACAGGTGGTAACAAGACCAAGACTCCCGGTCCAGGTGCTCAGTCTGCTCT
 
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rJMSF019N05+          CAGAGCCCTTGCTCGGTCAGGCATGAAGATTGGCCGTATAGAGGATGTTACTCCAATTCC
                      ____________________________________________________________
consensus             CAGAGCCCTTGCTCGGTCAGGCATGAAGATTGGCCGTATAGAGGATGTTACTCCAATTCC
 
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rJMSF019N05+          CACCGATAGCACTCGTAGAAAGGGTGGAAGAAGGGGAAGAAGGCTGTGATTCCTTCGTTA
                      ____________________________________________________________
consensus             CACCGATAGCACTCGTAGAAAGGGTGGAAGAAGGGGAAGAAGGCTGTGATTCCTTCGTTA
 
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rJMSF019N05+          TACTTGTGCACTCACCACCATGTTTCGAACCCTCAAGTCCGGTCATTTTTGTTTCGCTTT
                      ____________________________________________________________
consensus             TACTTGTGCACTCACCACCATGTTTCGAACCCTCAAGTCCGGTCATTTTTGTTTCGCTTT
 
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rJMSF019N05+          CGTTCTTTATTTCGGGTGTTTAAACATTTTGTAGCCAAGAGGCACTTGTGGTTGTCAATT
                      ____________________________________________________________
consensus             CGTTCTTTATTTCGGGTGTTTAAACATTTTGTAGCCAAGAGGCACTTGTGGTTGTCAATT
 
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rJMSF019N05+          TTACCAACTTTTGGTAGTAGTATGTAAGATGATGGAGTTGTTTCATATTACAACCTAATC
                      ____________________________________________________________
consensus             TTACCAACTTTTGGTAGTAGTATGTAAGATGATGGAGTTGTTTCATATTACAACCTAATC