Contig 008504:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019K21Sequence258010865 (2)ref|XP_009589069.1|2e-47PREDICTED: KH domain-containing protein At2g38610 [Nicotiana tomentosiformis]369008504 (2)
JMSF043E10Sequence694010865 (2)ref|XP_009589069.1|3e-121PREDICTED: KH domain-containing protein At2g38610 [Nicotiana tomentosiformis]328008504 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043E10+ TTA
                      ____________________________________________________________
consensus TTA
 
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rJMSF043E10+ TTTGCCCTGTTNCCNGAAACCNAGAANNTNTTTCGNGAAACNTACCNAGNGGGGGGGGGC
                      ____________________________________________________________
consensus TTTGCCCTGTTNCCNGAAACCNAGAANNTNTTTCGNGAAACNTACCNAGNGGGGGGGGGC
 
. : . : . : . : . : . :
rJMSF043E10+ CCNTGCGNGNGGGATTTTCCNGGGGGNTTTTACTTNTCTTTACATNTCAAANAGCNNAAA
                      ____________________________________________________________
consensus CCNTGCGNGNGGGATTTTCCNGGGGGNTTTTACTTNTCTTTACATNTCAAANAGCNNAAA
 
. : . : . : . : . : . :
rJMSF043E10+ NCNANGGGGGTNCCGNGGAAGGGNCNTAAGTTGTTTTTTTTTTTTNTATACAGTTGCCTT
rJMSF019K21+ TTTTTTTTTTTTTATACAGTTGCCTT
                      ____________________________________________________________
consensus NCNANGGGGGTNCCGNGGAAGGGNCNTAAGTTGTTTTTTTTTTTTTTATACAGTTGCCTT
 
. : . : . : . : . : . :
rJMSF043E10+ AATTTATAAGGTTGGTCGTGCGAGTTGGAGTTTCGTGTGGGTTCTTGTGGAACTTCATTC
rJMSF019K21+ AATTTATAAGGTTGGTCGTGCGAGTTGGAGTTTCGTGTGGGTTCTTGTGGAACTTCATTC
                      ____________________________________________________________
consensus AATTTATAAGGTTGGTCGTGCGAGTTGGAGTTTCGTGTGGGTTCTTGTGGAACTTCATTC
 
. : . : . : . : . : . :
rJMSF043E10+ TTTGGATNTATNTGTCATGTTNGTAAA
rJMSF019K21+ TTTGGATTTATTTGTCATGTTAGTAAATTGTAGTGTGAAATATGCTAGCAAAATTACTAT
                      ____________________________________________________________
consensus TTTGGATTTATTTGTCATGTTAGTAAATTGTAGTGTGAAATATGCTAGCAAAATTACTAT
 
. : . : . : . : . : . :
rJMSF019K21+ TATTATTGTTATTAGTTCATTGTAGAGGGTTAGTGGGTTNGAAAGCTTGTAGCTAATACC
                      ____________________________________________________________
consensus TATTATTGTTATTAGTTCATTGTAGAGGGTTAGTGGGTTNGAAAGCTTGTAGCTAATACC
 
. : . : . : . : . : . :
rJMSF019K21+ TTTTGCCTTGTCCATTATTTTGTTAGTGAACTGAACCAATGATGACTAATANTGTGCTAT
                      ____________________________________________________________
consensus TTTTGCCTTGTCCATTATTTTGTTAGTGAACTGAACCAATGATGACTAATANTGTGCTAT