Contig 008501:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018N10Sequence478007852 (2)ref|XP_004245687.1|5e-08PREDICTED: probable aminotransferase ACS10 isoform X2 [Solanum lycopersicum]740008501 (2)ref|XP_002281504.3|5e-65PREDICTED: probable aminotransferase ACS10, partial [Vitis vinifera]
JMSF048E18Sequence618007852 (2)ref|XP_004245687.1|7e-35PREDICTED: probable aminotransferase ACS10 isoform X2 [Solanum lycopersicum]741008501 (2)ref|XP_007040037.1|7e-88ACC synthase 10 isoform 2 [Theobroma cacao] gb|EOY24538.1| ACC synthase 10 isofo

Alignment

This contig is upended


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rJMSF048E18+          TCTGTCAAAGGATCTCTCTCTCCCGGGATTTAGGGTAGGAGTCATCTATACTTTCAACGA
                      ____________________________________________________________
consensus             TCTGTCAAAGGATCTCTCTCTCCCGGGATTTAGGGTAGGAGTCATCTATACTTTCAACGA
 
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rJMSF048E18+          AAGTGTTCTGGCTGCTGCTAGAAAACTGACCCGATTTTCATCCGTTTCGGTTCCTTCCCA
rJMSF018N10+                                                  TCCGTTTCGGTTCCTTCCCA
                      ____________________________________________________________
consensus             AAGTGTTCTGGCTGCTGCTAGAAAACTGACCCGATTTTCATCCGTTTCGGTTCCTTCCCA
 
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rJMSF048E18+          ACGAATTCTTGTCTCAATGCTATCAGATACGAGATTCATTAGCGTGTTCATTAAGAACCA
rJMSF018N10+          ACGAATTCTTGTCTCAATGCTATCAGATACGAGATTCATTAGCGTGTTCATTAAGAACCA
                      ____________________________________________________________
consensus             ACGAATTCTTGTCTCAATGCTATCAGATACGAGATTCATTAGCGTGTTCATTAAGAACCA
 
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rJMSF048E18+          TCGAGAAAGGCTCAGAAGGATGTATTCTGAATTTGTCTCGGGGCTAAAGAAGTTAGGTAT
rJMSF018N10+          TCGAGAAAGGCTCAGAAGGATGTATTCTGAATTTGTCTCGGGGCTAAAGAAGTTAGGTAT
                      ____________________________________________________________
consensus             TCGAGAAAGGCTCAGAAGGATGTATTCTGAATTTGTCTCGGGGCTAAAGAAGTTAGGTAT
 
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rJMSF048E18+          CGAGTGCATGCAGAGTAATGGCGGCCTCTACTGCTGGGCTGACATGAGTGGTTTAATTCG
rJMSF018N10+          CGAGTGCATGCAGAGTAATGGCGGCCTCTACTGCTGGGCTGACATGAGTGGTTTAATTCG
                      ____________________________________________________________
consensus             CGAGTGCATGCAGAGTAATGGCGGCCTCTACTGCTGGGCTGACATGAGTGGTTTAATTCG
 
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rJMSF048E18+          CTCGTATGGGGAAAAAGGCGAAATTGAACTCTGGGACAAGTTGCTAAATATAGCCAAGAT
rJMSF018N10+          CTCGTATGGGGAAAAAGGCGAAATTGAACTCTGGGACAAGTTGCTAAATATAGCCAAGAT
                      ____________________________________________________________
consensus             CTCGTATGGGGAAAAAGGCGAAATTGAACTCTGGGACAAGTTGCTAAATATAGCCAAGAT
 
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rJMSF048E18+          AAACGTCACTCCCGGCTCTTCCTGTCACTGTGTTGAACCCGGGTGGTTCCGGTTGTGTTT
rJMSF018N10+          AAACGTCACTCCCGGCTCTTCCTGTCACTGTGTTGAACCCGGGTGGTTCCGGTTGTGTTT
                      ____________________________________________________________
consensus             AAACGTCACTCCCGGCTCTTCCTGTCACTGTGTTGAACCCGGGTGGTTCCGGTTGTGTTT
 
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rJMSF048E18+          TACAACAATAAGCGAAAGGGATATTCCGGTTGTCATGGAAAGAATCCAAAAAGTGTCTGA
rJMSF018N10+          TACAACAATAAGCGAAAGGGATATTCCGGTTGTCATGGAAAGAATCCAAAAAGTGTCTGA
                      ____________________________________________________________
consensus             TACAACAATAAGCGAAAGGGATATTCCGGTTGTCATGGAAAGAATCCAAAAAGTGTCTGA
 
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rJMSF048E18+          AATTTTTAAGTCTCGCACTTGAAAAGTTTATATTGATTCATTATATTGGAAGATAATAAA
rJMSF018N10+          AATTTTTAAGTCTCGCACTTGAAAAGTTTATATTGATTCATTATATTGGAAGATAATAAA
                      ____________________________________________________________
consensus             AATTTTTAAGTCTCGCACTTGAAAAGTTTATATTGATTCATTATATTGGAAGATAATAAA
 
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rJMSF048E18+          TTTGTGCAGATACTTTGGTGTGGAAAGTCCAAATCGAGGATTCCAATCGAGGATTATCAA
rJMSF018N10+          TTTGTGCAGATACTTTGGTGTGGAAAGTCCAAATCGAGGATTCCAATCGAGGATTATCAA
                      ____________________________________________________________
consensus             TTTGTGCAGATACTTTGGTGTGGAAAGTCCAAATCGAGGATTCCAATCGAGGATTATCAA
 
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rJMSF048E18+          CTGATGCTGAAGCAAAAGAATTCGGTTTCTTCCCACTTTGATGACTCTTTGTGAATCCTG
rJMSF018N10+          CTGATGCTGAAGCAAAAGAATTCGGTTTCTTCCCACTTTGATGACTCTTTGTGAATCCTG
                      ____________________________________________________________
consensus             CTGATGCTGAAGCAAAAGAATTCGGTTTCTTCCCACTTTGATGACTCTTTGTGAATCCTG
 
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rJMSF048E18+          CCATTTTGCAATTTCTGGATTTTACCTTCACCTGGGTTTTTGAATACTGTAGGTAGTCAA
rJMSF018N10+          CCATTTTGCAATTTCTGGATTTTACCTTCACCTGGGTTTTTGAATACTGTAGGTAGTCAA
                      ____________________________________________________________
consensus             CCATTTTGCAATTTCTGGATTTTACCTTCACCTGGGTTTTTGAATACTGTAGGTAGTCAA
 
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rJMSF048E18+          TTAGTTTGTGCAAAGGCAAAT                                       
rJMSF018N10+          TTAGTTTGTGCAAAGGCAAATATGTAAAGGAGATCATATAATCCAGTTCCCATGTTCTTC
                      ____________________________________________________________
consensus             TTAGTTTGTGCAAAGGCAAATATGTAAAGGAGATCATATAATCCAGTTCCCATGTTCTTC
 
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rJMSF018N10+          TGCAGACTCATTGTGAGCTCATTCTTTTGTTTTTTACTTCTATAAGCTCAAGGAAATTAT
                      ____________________________________________________________
consensus             TGCAGACTCATTGTGAGCTCATTCTTTTGTTTTTTACTTCTATAAGCTCAAGGAAATTAT