| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012J22 | Sequence | 590 | 008499 (3) | ref|XP_009804514.1| | 2e-49 | PREDICTED: myosin heavy chain kinase B-like [Nicotiana sylvestris] | 738 | 014820 | ref|XP_009606144.1| | 1e-82 | PREDICTED: myosin heavy chain kinase B-like [Nicotiana tomentosiformis] |
| JMSF018G11 | Sequence | 520 | 010659 (4) | ref|XP_009606155.1| | 4e-40 | PREDICTED: putative proline-rich receptor-like protein kinase PERK11 isoform X1 | 713 | 008499 (3) | ref|XP_009804514.1| | 1e-53 | PREDICTED: myosin heavy chain kinase B-like [Nicotiana sylvestris] |
| JMSF050P06 | Sequence | 627 | 010659 (4) | ref|XP_004238593.1| | 1e-42 | PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X1 [Solanum l | 708 | 008499 (3) | ref|XP_009804514.1| | 1e-52 | PREDICTED: myosin heavy chain kinase B-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF012J22+ GTCGCCGGATATCACGATGGCCTTCACCAGCCC
rJMSF050P06+ TGGCCCGTGAAAATCCGGTCGCCGGATATCACGATGGCCTTCACCAGCCC
rJMSF018G11+ TGGTGGCCCGTGAAAATCCGGTCGCCGGATATCACGATGGCCTTCACCAGCCC
____________________________________________________________
consensus TGGTGGCCCGTGAAAATCCGGTCGCCGGATATCACGATGGCCTTCACCAGCCC
. : . : . : . : . : . :
JMFF012J22+ ACTGTTGGATTTGAAAGCCGCGAATTCCTTCATGTCCTTCCACACCCGAATGTTCTTGCT
rJMSF050P06+ ACTGTTGGATTTGAAAGCCGCGAATTCCTTCATGTCCTTCCACACCCGAATGTTCTTGCT
rJMSF018G11+ ACTGTTGGATTTGAAAGCCGCGAATTCCTTCATGTCCTTCCACACCCGAATGTTCTTGCT
____________________________________________________________
consensus ACTGTTGGATTTGAAAGCCGCGAATTCCTTCATGTCCTTCCACACCCGAATGTTCTTGCT
. : . : . : . : . : . :
JMFF012J22+ GTCCGACCCCGTGTACAGAATCTTATCCCGGGAAGCCAGAGAATATATATGCCCTTCCTC
rJMSF050P06+ GTCCGACCCCGTGTACAGAATCTTATCCCGGGAAGCCAGAGAATATATATGCCCTTCCTC
rJMSF018G11+ GTCCGACCCCGTGTACAGAATCTTATCCCGGGAAGCCAGAGAATATATATGCCCTTCCTC
____________________________________________________________
consensus GTCCGACCCCGTGTACAGAATCTTATCCCGGGAAGCCAGAGAATATATATGCCCTTCCTC
. : . : . : . : . : . :
JMFF012J22+ CCTAACCAGAGACCCAATCAGGCAGTTCTGCGGGAGATTCTGCGCCGCCGCATTGTTCAT
rJMSF050P06+ CCTAACCAGAGACCCAATCAGGCAGTTCTGCGGGAGATTCTGCGCCGCCGCATTGTTCAT
rJMSF018G11+ CCTAACCAGAGACCCAATCAGGCAGTTCTGCGGGAGATTCTGCGCCGCCGCATTGTTCAT
____________________________________________________________
consensus CCTAACCAGAGACCCAATCAGGCAGTTCTGCGGGAGATTCTGCGCCGCCGCATTGTTCAT
. : . : . : . : . : . :
JMFF012J22+ CCCCATCGCCCCCGCCCCCGCCGCGCTTTGCGATTGCGACCATGGAGACTTGGCGAACGG
rJMSF050P06+ CCCCATCGCCCCCGCCCCCGCCGCGCTTTGCGATTGCGACCATGGAGACTTGGCGAACGG
rJMSF018G11+ CCCCATCGCCCCCGCCCCCGCCGCGCTTTGCGATTGCGACCATGGAGACTTGGCGAACGG
____________________________________________________________
consensus CCCCATCGCCCCCGCCCCCGCCGCGCTTTGCGATTGCGACCATGGAGACTTGGCGAACGG
. : . : . : . : . : . :
JMFF012J22+ GGAGTTCTGGTTCCACGGCGACAACATGGTCGGCGACCCATCCACGCTCAGGCGGACGTT
rJMSF050P06+ GGAGTTCTGGTTCCACGGCGACAACATGGTCGGCGACCCATCCACGCTCAGGCGGACGTT
rJMSF018G11+ GGAGTTCTGGTTCCACGGCGACAACATGGTCGGCGACCCATCCACGCTCAGGCGGACGTT
____________________________________________________________
consensus GGAGTTCTGGTTCCACGGCGACAACATGGTCGGCGACCCATCCACGCTCAGGCGGACGTT
. : . : . : . : . : . :
JMFF012J22+ AGGATCGTACGCCGAGTAGCTGCTCTTACGCCCGTTAAAATCCTCGTCGGTTTGGCCCAC
rJMSF050P06+ AGGATCGTACGCCGAGTAGCTGCTCTTACGCCCGTTAAAATCCTCGTCGGTTTGGCCCAC
rJMSF018G11+ AGGATCGTACGCCGAGTAGCTGCTCTTACGCCCGTTAAAATCCTCGTCGGTTTGGCCCAC
____________________________________________________________
consensus AGGATCGTACGCCGAGTAGCTGCTCTTACGCCCGTTAAAATCCTCGTCGGTTTGGCCCAC
. : . : . : . : . : . :
JMFF012J22+ CGGCATGTTGGGATCGGAATGCGCCATTTTTTAGGATATATCTTTGTTCTTCAATTCCTT
rJMSF050P06+ CGGCATGTTGGGATCGGAATGCGCCATTTTTTAGGATATATCTTTGTTCTTCAATTCCTT
rJMSF018G11+ CGGCATGTTGGGATCGGAATGCGCCATTTTTTAGGATATATCTTTGTTCTTCAATTCCTT
____________________________________________________________
consensus CGGCATGTTGGGATCGGAATGCGCCATTTTTTAGGATATATCTTTGTTCTTCAATTCCTT
. : . : . : . : . : . :
JMFF012J22+ GCGGTCTATTATCATATACTCCAATCCCAATGCCAATGCCAATTCCAATTCCACCATAGA
rJMSF050P06+ GCGGTCTATTATCATATACTCCAATCCCAATGCCAATGCCAATTCCAATTCCACCATAGA
rJMSF018G11+ GCGGTCTATTATCATATACTCCAATCCCAATGCCAATGCCAATTCCAATTCCACCATAGA
____________________________________________________________
consensus GCGGTCTATTATCATATACTCCAATCCCAATGCCAATGCCAATTCCAATTCCACCATAGA
. : . : . : . : . : . :
JMFF012J22+ AATAAAGACAGAAAGATTGCAGGGGAGGGAGGAAGAATGATTGAATGGGAGAGAGATTTT
rJMSF050P06+ AATAAAGACAGAAAGATTGCAGGGGAGGGAGGAAGAATGATTGAATGGGAGAGAGATTTT
rJMSF018G11+ AATAAAGACAGAAAGATTGCAGGGGAGGGAGGAAGAATGATTGAATGGGAGAGAGATTTT
____________________________________________________________
consensus AATAAAGACAGAAAGATTGCAGGGGAGGGAGGAAGAATGATTGAATGGGAGAGAGATTTT
. : . : . : . : . : . :
JMFF012J22+ GTAGGGAAGAATAATAT
rJMSF050P06+ GTAGGGAAGAATAATATAGGACGGAGGCGGGAGAAGATGAATTTATGATGTCGTTGGCAG
rJMSF018G11+ GTAGGGAAGAATAATATAGGACGGAGGCGGGAGAAGATGAATTTATGATGTCGTTGGCAG
____________________________________________________________
consensus GTAGGGAAGAATAATATAGGACGGAGGCGGGAGAAGATGAATTTATGATGTCGTTGGCAG
. : . : . : . : . : . :
rJMSF050P06+ TTACGTTGACACCTGTAAAATATTTCGATTCGAATCTTTATCAACTAACAATCATCCA
rJMSF018G11+ TTACGTTGACACCTGTAAAATATTTCGATTCGAATCTTTATCAACTAACAATCATCCAAT
____________________________________________________________
consensus TTACGTTGACACCTGTAAAATATTTCGATTCGAATCTTTATCAACTAACAATCATCCAAT