Contig 008494:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF017J06Sequence693008494 (2)ref|XP_009758709.1|1e-04PREDICTED: NAC domain-containing protein 19-like [Nicotiana sylvestris]
JMSF017K06Sequence529015723ref|XP_010106034.1|4e-33NAC domain-containing protein 78 [Morus notabilis] gb|EXC07304.1| NAC domain-con744008494 (2)ref|XP_009758709.1|3e-06PREDICTED: NAC domain-containing protein 19-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF017K06+                                              AGTCCAAAAGTGATTATGTTTCAA
                      ____________________________________________________________
consensus                                                 AGTCCAAAAGTGATTATGTTTCAA
 
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rJMSF017J06+                           TTGAATGATCTTGAAGGAGACATTGGACAGTCACCAGAAACCT
rJMSF017K06+          GCGATGATTTCATGGAATTGAATGATCTTGAAGGAGACATTGGACAGTCACCAGAAACCT
                      ____________________________________________________________
consensus             GCGATGATTTCATGGAATTGAATGATCTTGAAGGAGACATTGGACAGTCACCAGAAACCT
 
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rJMSF017J06+          GCAGGGTTGAGCATCCATCTGACCAAGATGTTTTGTATGATGGCTTCTTGGAATTGGCCG
rJMSF017K06+          GCAGGGTTGAGCATCCATCTGACCAAGATGTTTTGTATGATGGCTTCTTGGAATTGGCCG
                      ____________________________________________________________
consensus             GCAGGGTTGAGCATCCATCTGACCAAGATGTTTTGTATGATGGCTTCTTGGAATTGGCCG
 
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rJMSF017J06+          ATCTTGACAAAGACATTAGCAAATCCCCTGTGGTNGAAAAACCTGAAAACCCCCNTGATG
rJMSF017K06+          ATCTTGACAAAGACATTAGCAAATCCCCTGTGGTTGAAAAACCTGAAAACCCCCTTGATG
                      ____________________________________________________________
consensus             ATCTTGACAAAGACATTAGCAAATCCCCTGTGGTTGAAAAACCTGAAAACCCCCTTGATG
 
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rJMSF017J06+          TAGATCTTGNTGATACCATTTTAAGAGGCGACTACCTGGAACTAAATGATCTTGCAGAAT
rJMSF017K06+          TAGATCTTGCTGATACCATTTTAAGAGGCGACTACCTGGAACTAAATGATCTTGCAGAAT
                      ____________________________________________________________
consensus             TAGATCTTGCTGATACCATTTTAAGAGGCGACTACCTGGAACTAAATGATCTTGCAGAAT
 
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rJMSF017J06+          TGGCATCCCATTCTTCCAGTTCAGCAAATTCAAGTCATCGGAAATCTGATGAATTTTTTG
rJMSF017K06+          TGGCATCCCATTCTTCCAGTTCAGCAAATTCAAGTCATCGGAAATCTGATGAATTTTTTG
                      ____________________________________________________________
consensus             TGGCATCCCATTCTTCCAGTTCAGCAAATTCAAGTCATCGGAAATCTGATGAATTTTTTG
 
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rJMSF017J06+          GCCTTCTCCNGGATGATGAGAAAAGTCNAGATCTGCAGGCTAAGGGNTCGGGCTTCCATT
rJMSF017K06+          GCCTTCTCCTGGATGATGAGAAAAGTCAAGATCTGCAGGCTAAGGGTTCGGGCTTCCATT
                      ____________________________________________________________
consensus             GCCTTCTCCTGGATGATGAGAAAAGTCAAGATCTGCAGGCTAAGGGTTCGGGCTTCCATT
 
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rJMSF017J06+          GCAATTACATGGGATCCGGGAGACCGAATGAAGTGATATTGCCGCCTACCACATCAGAAT
rJMSF017K06+          GCAATTACATGGGATCCGGGAGACCGAATGAAGTGATATTGCCGCCTACCACATCAGAAT
                      ____________________________________________________________
consensus             GCAATTACATGGGATCCGGGAGACCGAATGAAGTGATATTGCCGCCTACCACATCAGAAT
 
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rJMSF017J06+          TGATGATTNCCGGGACTGGTACAAATGAACCACAAGTCCAGACTCGACCAACTTCATCCA
rJMSF017K06+          TGATGATTACCGGGACTGGTACAAATGAACCACAAGTCCAGACTCGACCAACTTCATCCA
                      ____________________________________________________________
consensus             TGATGATTACCGGGACTGGTACAAATGAACCACAAGTCCAGACTCGACCAACTTCATCCA
 
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rJMSF017J06+          CCAAATCANAATCTTCAGATAAAGCTCTCANGGATCCAAATGTCNNGAGGCCAAAGCCAG
rJMSF017K06+          CCAAATCAAAATCTTCAGATAAAGCTCTCAAGGATCCAAATGTCAAGAGGCCAAAGCCAG
                      ____________________________________________________________
consensus             CCAAATCAAAATCTTCAGATAAAGCTCTCAAGGATCCAAATGTCAAGAGGCCAAAGCCAG
 
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rJMSF017J06+          AATCTAGAAATGAAGANTCATCTAATGCTTCTNCCAGCAGGCACAGAAAGAAGAAGTTTA
rJMSF017K06+          AATCTAGAAATGAAGACTCATCTAATGCTTCTTCCAGCAGGCACAGAAAGAAGAAGTTTA
                      ____________________________________________________________
consensus             AATCTAGAAATGAAGACTCATCTAATGCTTCTTCCAGCAGGCACAGAAAGAAGAAGTTTA
 
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rJMSF017J06+          AGAAGTACTTCTGCTTCTTCCCTTTCTAATTTNTTAGTATTCAGCATCTATGATCATATA
rJMSF017K06+          AGAAGTACTTCTGCTTCTTCCCTTTCTAATTTATTAGTATTCAGCATCTATGATCATATA
                      ____________________________________________________________
consensus             AGAAGTACTTCTGCTTCTTCCCTTTCTAATTTATTAGTATTCAGCATCTATGATCATATA
 
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rJMSF017J06+          NATATATATNCANATTTTATGAGAGTGTGAA                             
rJMSF017K06+          TATATATATACATATTTTATGAGAGTGTGAACATAGATATNGNTAGATATNTACAACTCT
                      ____________________________________________________________
consensus             TATATATATACATATTTTATGAGAGTGTGAACATAGATATNGNTAGATATNTACAACTCT