| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018P07 | Sequence | 356 | 005012 (8) | ref|XP_006306517.1| | 2e-12 | hypothetical protein CARUB_v10012516mg [Capsella rubella] gb|EOA39415.1| hypothe | 202 | 008492 (6) | emb|CAA09458.1| | 2e-19 | hypothetical protein [Cicer arietinum] |
| JMSF013F08 | Sequence | 299 | 005012 (8) | 708 | 008492 (6) | ref|XP_006362549.1| | 2e-101 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum] | |||
| JMSF013M11 | Sequence | 477 | 005012 (8) | ref|XP_009800603.1| | 4e-31 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris] | 686 | 008492 (6) | ref|XP_009800603.1| | 2e-116 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris] |
| JMSF017D16 | Sequence | 436 | 005012 (8) | ref|XP_006362549.1| | 5e-24 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum] | 724 | 008492 (6) | ref|XP_006362549.1| | 1e-100 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum] |
| JMSF024L13 | Sequence | 663 | 005012 (8) | ref|XP_009800603.1| | 1e-76 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris] | 701 | 008492 (6) | ref|XP_009800603.1| | 6e-117 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana sylvestris] |
| JMSF044I07 | Sequence | 719 | 005012 (8) | ref|XP_009608744.1| | 1e-90 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Nicotiana tomentosiformis | 704 | 008492 (6) | ref|XP_006362549.1| | 8e-101 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF013M11+ TCAGATTAAAG
rJMSF024L13+ TTCTCAGATTAAAG
____________________________________________________________
consensus TTCTCAGATTAAAG
. : . : . : . : . : . :
rJMSF013M11+ CCTCCTCCTTCTCATACTGCCTCGTGGACCGTGACTCCGACTCGACCTCAACTCTCGAGT
rJMSF024L13+ CCTCCTCCTTCTCATACTGCCTCGTGGACCGTGACTCCGACTCGACCTCAACTCTCGAGT
rJMSF044I07+ TCGAGT
rJMSF013F08+ TCGAGT
rJMSF017D16+ CGAGT
____________________________________________________________
consensus CCTCCTCCTTCTCATACTGCCTCGTGGACCGTGACTCCGACTCGACCTCAACTCTCGAGT
. : . : . : . : . : . :
rJMSF013M11+ TTGACTCGGCCACCCCTCCTGGCGCGGTCACTGCTCCGTTAATCCGCAACTCGAAGCTGG
rJMSF024L13+ TTGACTCGGCCACCCCTCCTGGCGCGGTCACTGCTCCGTTAATCCGCAACTCGAAGCTGG
rJMSF044I07+ TTGACTCGGCCACCCCTCCTGGCGCGGTCACTGCTCCGTTAATCCGCAACTCGAAGCTGG
rJMSF013F08+ TTGACTCGGCCACCCCTCCTGGCGCGGTCACTGCTCCGTTAATCCGCAACTCGAAGCTGG
rJMSF017D16+ TTGACTCGGCCACCCCTCCTGGCGCGGTCACTGCTCCGTTAATCCGCAACTCGAAGCTGG
____________________________________________________________
consensus TTGACTCGGCCACCCCTCCTGGCGCGGTCACTGCTCCGTTAATCCGCAACTCGAAGCTGG
. : . : . : . : . : . :
rJMSF013M11+ ACACATTCTACTACGTGGACCTGACGGGGCTGAGTGTCGCCGGGAACATGCTCCCCATCT
rJMSF024L13+ ACACATTCTACTACGTGGACCTGACGGGGCTGAGTGTCGCCGGGAACATGCTCCCCATCT
rJMSF044I07+ ACACATTCTACTACGTGGACCTGACGGGGCTGAGTGTCGCCGGGAACATGCTCCCCATCT
rJMSF013F08+ ACACATTCTACTACGTGGACCTGACGGGGCTGAGTGTCGCCGGGAACATGCTCCCCATCT
rJMSF017D16+ ACACATTCTACTACGTGGACCTGACGGGGCTGAGTGTCGCCGGGAACATGCTCCCCATCT
____________________________________________________________
consensus ACACATTCTACTACGTGGACCTGACGGGGCTGAGTGTCGCCGGGAACATGCTCCCCATCT
. : . : . : . : . : . :
rJMSF013M11+ CCACCTCCGCTCTGAAGCTAGACGATAACGGTGACGGCGGGGTGATCGTGGACTCGGGAA
rJMSF024L13+ CCACCTCCGCTCTGAAGCTAGACGATAACGGTGACGGCGGGGTGATCGTGGACTCGGGAA
rJMSF044I07+ CCACCTCCGCTCTGAAGCTAGACGATAACGGTGACGGCGGGGTGATCGTGGACTCGGGAA
rJMSF013F08+ CCACCTCCGCTCTGAAGCTAGACGATAACGGTGACGGCGGGGTGATCGTGGACTCGGGAA
rJMSF017D16+ CCACCTCCGCTCTGAAGCTAGACGATAACGGTGACGGCGGGGTGATCGTGGACTCGGGAA
____________________________________________________________
consensus CCACCTCCGCTCTGAAGCTAGACGATAACGGTGACGGCGGGGTGATCGTGGACTCGGGAA
. : . : . : . : . : . :
rJMSF013M11+ CGGCGGTGACCCGGCTGCAAACAGACGTGTACAACTCCCTCCGCGACGAGTTCGTTAAGG
rJMSF024L13+ CGGCGGTGACCCGGCTGCAAACAGACGTGTACAACTCCCTCCGCGACGAGTTCGTTAAGG
rJMSF044I07+ CGGCGGTGACCCGGCTGCAAACAGACGTGTACAACTCCCTCCGCGACGAGTTCGTTAAGG
rJMSF013F08+ CGGCGGTGACCCGGCTGCAAACAGACGTGTACAACTCCCTCCGCGACGAGTTCGTTAAGG
rJMSF017D16+ CGGCGGTGACCCGGCTGCAAACAGACGTGTACAACTCCCTCCGCGACGAGTTCGTTAAGG
____________________________________________________________
consensus CGGCGGTGACCCGGCTGCAAACAGACGTGTACAACTCCCTCCGCGACGAGTTCGTTAAGG
. : . : . : . : . : . :
rJMSF013M11+ GGACGCGTCACCTGCCGTCAACAAACGGCGTGGCCTTATTCGACACGTGCTTCGACTTGT
rJMSF024L13+ GGACGCGTCACCTGCCGTCAACAAACGGCGTGGCCTTATTCGACACGTGCTTCGACTTGT
rJMSF044I07+ GGACGCGTCACCTGCCGTCAACAAACGGCGTGGCCTTATTCGACACGTGCTTCGACTTGT
rJMSF013F08+ GGACGCGTCACCTGCCGTCAACAAACGGCGTGGCCTTATTCGACACGTGCTTCGACTTGT
rJMSF017D16+ GGACGCGTCACCTGCCGTCAACAAACGGCGTGGCCTTATTCGACACGTGCTTCGACTTGT
____________________________________________________________
consensus GGACGCGTCACCTGCCGTCAACAAACGGCGTGGCCTTATTCGACACGTGCTTCGACTTGT
. : . : . : . : . : . :
rJMSF013M11+ CAAAGAAGAAGAGCGTTGACGTGCCAACGGTGTCGTTCCACTTCTCAAACGGGAAAGAGT
rJMSF024L13+ CAAAGAAGAAGAGCGTTGACGTGCCAACGGTGTCGTTCCACTTCTCAAACGGGAAAGAGT
rJMSF044I07+ CAAAGAAGAAGAGCGTTGACGTGCCAACGGTGTCGTTCCACTTCTCAAACGGGAAAGAGT
rJMSF013F08+ CAAAGAAGAAGAGCGTTGACGTGCCAACGGTGTCGTTCCACTTCTCAAACGGGAAAGAGT
rJMSF017D16+ CAAAGAAGAAGAGCGTTGACGTGCCAACGGTGTCGTTCCACTTCTCAAACGGGAAAGAGT
____________________________________________________________
consensus CAAAGAAGAAGAGCGTTGACGTGCCAACGGTGTCGTTCCACTTCTCAAACGGGAAAGAGT
. : . : . : . : . : . :
rJMFF018P07+ CCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
rJMSF013M11+ TAGCGTTACCGGCTAAGAACTACCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
rJMSF024L13+ TAGCGTTACCGGCTAAGAACTACCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
rJMSF044I07+ TAGCGTTACCGGCTAAGAACTACCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
rJMSF013F08+ TAGCGTTACCGGCTAAGAACTACCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
rJMSF017D16+ TAGCGTTACCGGCTAAGAACTACCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
____________________________________________________________
consensus TAGCGTTACCGGCTAAGAACTACCTGATTCCGGTGGACTCGTCAGGGACGTTTTGCTTGG
. : . : . : . : . : . :
rJMFF018P07+ CCTTTGCTCGGACGTCGTNTTCGCTGTNGATCATAGGGAACGTACAGCAACAGGGGACNC
rJMSF013M11+ CCTTTGCTCCGACGTCGTCTTCGCTGTCGATCATAGGGAACGTACAGCAACAGGGGACAC
rJMSF024L13+ CCTTTGCTCCGACGTCGTCTTCGCTGTCGATCATAGGGAACGTACAGCAACAGGGGACAC
rJMSF044I07+ CCTTTGCTCCGACGTCGTCTTCGCTGTCGATCATAGGGAACGTACAGCAACAGGGGACAC
rJMSF013F08+ CCTTTGCTCCGACGTCGTCTTCGCTGTCGATCATAGGGAACGTACAGCAACAGGGGACAC
rJMSF017D16+ CCTTTGCTCCGACGTCGTCTTCGCTGTCGATCATAGGGAACGTACAGCAACAGGGGACAC
____________________________________________________________
consensus CCTTTGCTCCGACGTCGTCTTCGCTGTCGATCATAGGGAACGTACAGCAACAGGGGACAC
. : . : . : . : . : . :
rJMFF018P07+ GTGTCACTTTCGACCNTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
rJMSF013M11+ GTGTCACTTTCGACCTTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
rJMSF024L13+ GTGTCACTTTCGACCTTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
rJMSF044I07+ GTGTCACTTTCGACCTTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
rJMSF013F08+ GTGTCACTTTCGACCTTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
rJMSF017D16+ GTGTCACTTTCGACCTTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
____________________________________________________________
consensus GTGTCACTTTCGACCTTGCCAACTCCCTCATTGGATTCTCATCCAATAAATGCTAGAAGC
. : . : . : . : . : . :
rJMFF018P07+ CAAGCCACAATATTTAATTTCNTAGTTCTTGGCACTATTTAGTA
rJMSF013M11+ CAAGCCACAATATTTAATTTCTTAGTTCTTGGCACTATTTAGTATTTGTATTTGTATTTA
rJMSF024L13+ CAAGCCACAATATTTAATTTCTTAGTTCTTGGCACTATTTAGTATTTGTATTTGTATTTA
rJMSF044I07+ CAAGCCACAATATTTAATTTCTTAGTTCTTGGCACTATTTAGTATTTGTATTTGTATTTA
rJMSF013F08+ CAAGCCACAATATTTAATTTCTTAGTTCTTGGCACTATTTAGTATTTGTATTTGTATTTA
rJMSF017D16+ CAAGCCACAATATTTAATTTCTTAGTTCTTGGCACTATTTAGTATTTGTATTTGTATTTA
____________________________________________________________
consensus CAAGCCACAATATTTAATTTCTTAGTTCTTGGCACTATTTAGTATTTGTATTTGTATTTA
. : . : . : . : . : . :
rJMSF013M11+ CCCTCTGAATTTACT
rJMSF024L13+ CCCTCTGAATTTACTTGCTTGTGGGTC
rJMSF044I07+ CCCTCTGAATTTACTTGCTTGTGGGTCCAACCTCACAAGTGTAACGTGA-CAGGTTTTGG
rJMSF013F08+ CCCTCTGAATTTACTTGCTTGTGGGTCCAACCTCACAAGTGTAACGTGACCAGGTTTTGG
rJMSF017D16+ CCCTCTGAATTTACTTGCTTGTGGGTCCAACCTCACAAGTGTAACGTGA-CAGGTTTTGG
____________________________________________________________
consensus CCCTCTGAATTTACTTGCTTGTGGGTCCAACCTCACAAGTGTAACGTGA-CAGGTTTTGG
. : . : . : . : . : . :
rJMSF044I07+ AGAATTTTAGAGC
rJMSF013F08+ AGAATTTTAGAGC
rJMSF017D16+ AGAATTTTAGAGCATGTTTGGTGTATAGTACAAGTTATTTATTGCCCGTTATGAGGGTAT
____________________________________________________________
consensus AGAATTTTAGAGCATGTTTGGTGTATAGTACAAGTTATTTATTGCCCGTTATGAGGGTAT