Contig 008490:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O03Sequence430003390 (5)ref|XP_009627336.1|49.3PREDICTED: probable transcription factor PosF21 [Nicotiana tomentosiformis] ref|753008490 (3)ref|XP_011088545.1|157PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum] ref|XP_0110885
JMSF029M19Sequence658003390 (5)ref|XP_009627336.1|137PREDICTED: probable transcription factor PosF21 [Nicotiana tomentosiformis] ref|696008490 (3)ref|XP_011088545.1|143PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum] ref|XP_0110885
JMSF046G11Sequence789003390 (5)ref|XP_009804619.1|123PREDICTED: probable transcription factor PosF21 [Nicotiana sylvestris] ref|XP_00829008490 (3)ref|XP_011088545.1|223PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum] ref|XP_0110885

Alignment

This contig is upended


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rJMSF046G11+                                                       TAGATTCAAATTCAA
                      ____________________________________________________________
consensus                                                          TAGATTCAAATTCAA
 
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rJMSF046G11+          ACACATTTAGTTTGGAGTTTGGGAACGGTGAATTTAGTGGGGCTGAANCTGAAAAAGATC
                      ____________________________________________________________
consensus             ACACATTTAGTTTGGAGTTTGGGAACGGTGAATTTAGTGGGGCTGAANCTGAAAAAGATC
 
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rJMSF046G11+          ATGGCTAATGAGAAACTTGCTGAGATTGCATTAACAGATCCAAAACGTGCCAAAAGAATT
                      ____________________________________________________________
consensus             ATGGCTAATGAGAAACTTGCTGAGATTGCATTAACAGATCCAAAACGTGCCAAAAGAATT
 
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rJMSF046G11+          TTGGCCAACCGTCAATNTGCTGCTCGTTCCAAGGAACGCAAGATGAGGTACATTGCAGAG
rJMSF029M19+                                                 AAGATGAGGTACATTGCAGAG
rJMSF016O03+                                     TCCAAGGAACGCAAGATGAGGTACATTGCAGAG
                      ____________________________________________________________
consensus             TTGGCCAACCGTCAATNTGCTGCTCGTTCCAAGGAACGCAAGATGAGGTACATTGCAGAG
 
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rJMSF046G11+          TTAGAACATAAGGTGCAAACATTGCAGACTGAGGCTACAACATTGTCTGCCCAACTTACA
rJMSF029M19+          TTAGAACATAAGGTGCAAACATTGCAGACTGAGGNTACAACATTGTCTGCCCAACNTACA
rJMSF016O03+          TTAGAACATAAGGTGCAAACATTGCAGACTGAGGCTACAACATTGTCTGCCCAACTTACA
                      ____________________________________________________________
consensus             TTAGAACATAAGGTGCAAACATTGCAGACTGAGGCTACAACATTGTCTGCCCAACTTACA
 
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rJMSF046G11+          CTTCTGCAGAGAGACTCTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
rJMSF029M19+          CTTCTGCAGAGAGACTCTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
rJMSF016O03+          CTTCTGCAGAGAGACTNTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
                      ____________________________________________________________
consensus             CTTCTGCAGAGAGACTCTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
 
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rJMSF046G11+          CAAGCCATGGAACAACAAGCTCAACTTCGTGATGCTCTGAATGAAGCATTAACTGCGGAA
rJMSF029M19+          CAAGCCATGGAACAACAAGCTCAANTTCGTGATGCTNTGAATGAAGCATTAACTGCGGAA
rJMSF016O03+          CAAGCCATGGAACAACAAGCTCAACTTCGTGATGCTCTGAATGAAGCATTAACTGCGGAA
                      ____________________________________________________________
consensus             CAAGCCATGGAACAACAAGCTCAACTTCGTGATGCTCTGAATGAAGCATTAACTGCGGAA
 
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rJMSF046G11+          GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
rJMSF029M19+          GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
rJMSF016O03+          GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
                      ____________________________________________________________
consensus             GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
 
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rJMSF046G11+          CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
rJMSF029M19+          CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
rJMSF016O03+          CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
                      ____________________________________________________________
consensus             CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
 
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rJMSF046G11+          CATCAGTTGCAGCAACAGCAACAGCATCAACAATCGTCCCAGCCTCAGCCGCAGCATAAC
rJMSF029M19+          CATCAGTTGCAGCAACAGCAACAGCATCAACAATNGTNCCAGCCTCAGCCGCAGCATAAC
rJMSF016O03+          CATCAGTTGCAGCAACAGCAACAGCATCAACAATCGTCCCAGCCTCAGCCGCAGCATAAC
                      ____________________________________________________________
consensus             CATCAGTTGCAGCAACAGCAACAGCATCAACAATCGTCCCAGCCTCAGCCGCAGCATAAC
 
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rJMSF046G11+          AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
rJMSF029M19+          AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
rJMSF016O03+          AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
                      ____________________________________________________________
consensus             AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
 
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rJMSF046G11+          TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
rJMSF029M19+          TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
rJMSF016O03+          TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
                      ____________________________________________________________
consensus             TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
 
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rJMSF046G11+          GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
rJMSF029M19+          GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
rJMSF016O03+          GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
                      ____________________________________________________________
consensus             GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
 
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rJMSF046G11+          CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
rJMSF029M19+          CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
rJMSF016O03+          CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
                      ____________________________________________________________
consensus             CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
 
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rJMSF046G11+          TACGGGCTTTAATATATAGTAGGGAGTATATAT                           
rJMSF029M19+          TACGGGCTTTAATATATAGTAGGGAGTATATATTGTTTACATGAACTTATGACATT    
rJMSF016O03+          TACGGGCTTTAATATATAGTAGGGAGTATATATTGTTTACATGAACTTATGACATTTGGA
                      ____________________________________________________________
consensus             TACGGGCTTTAATATATAGTAGGGAGTATATATTGTTTACATGAACTTATGACATTTGGA
 
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rJMSF016O03+          AAGGTGAACTCAGATGTTCTGTCAACCAGTAGTGGTTTTCGAAGCTCCTTTCCCTGTTGT
                      ____________________________________________________________
consensus             AAGGTGAACTCAGATGTTCTGTCAACCAGTAGTGGTTTTCGAAGCTCCTTTCCCTGTTGT