| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025N06 | Sequence | 731 | 008480 (9) | dbj|BAD06582.1| | 2e-52 | PERK1-like protein kinase [Nicotiana tabacum] | |||||
| JMSF002J13 | Sequence | 438 | 010702 (9) | 717 | 008480 (9) | dbj|BAD06582.1| | 8e-51 | PERK1-like protein kinase [Nicotiana tabacum] | |||
| JMSF002K13 | Sequence | 434 | 010702 (9) | 727 | 008480 (9) | dbj|BAD06582.1| | 2e-52 | PERK1-like protein kinase [Nicotiana tabacum] | |||
| JMSF006C18 | Sequence | 355 | 010730 (53) | gb|ADB03784.1| | 1e-55 | catalase [Ipomoea batatas] | 399 | 008480 (9) | |||
| JMSF012N08 | Sequence | 447 | 010702 (9) | 711 | 008480 (9) | dbj|BAD06582.1| | 2e-49 | PERK1-like protein kinase [Nicotiana tabacum] | |||
| JMSF015D03 | Sequence | 304 | 010702 (9) | 782 | 008480 (9) | dbj|BAD06582.1| | 7e-61 | PERK1-like protein kinase [Nicotiana tabacum] | |||
| JMSF023E16 | Sequence | 693 | 010702 (9) | 736 | 008480 (9) | dbj|BAD06582.1| | 2e-72 | PERK1-like protein kinase [Nicotiana tabacum] | |||
| JMSF032D22 | Sequence | 634 | 010702 (9) | 646 | 008480 (9) | dbj|BAD06582.1| | 5e-50 | PERK1-like protein kinase [Nicotiana tabacum] | |||
| JMSF051H21 | Sequence | 641 | 010702 (9) | 712 | 008480 (9) | dbj|BAD06582.1| | 2e-49 | PERK1-like protein kinase [Nicotiana tabacum] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF023E16+ TTTCATGGACGATAGCTTGGTGGACTGGGCAAGGCCTTTA
rJMSF015D03+ TA
____________________________________________________________
consensus TTTCATGGACGATAGCTTGGTGGACTGGGCAAGGCCTTTA
. : . : . : . : . : . :
rJMSF023E16+ CTCAATCGAGCTCTAGAAGATGGAAACTTTAATACCCTTGTTGATCCACGGCTAGAAAAC
rJMSF002K13+ AAAAC
rJMFF025N06+ AAAAC
rJMSF015D03+ CTCCATCGAGCTNTAGAAGATGGAAACTTTAATACCCTTGTTGATCCACGGCTAGAAAAC
____________________________________________________________
consensus CTCCATCGAGCTCTAGAAGATGGAAACTTTAATACCCTTGTTGATCCACGGCTAGAAAAC
. : . : . : . : . : . :
rJMSF023E16+ GATTTCAACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
rJMSF002J13+ TTCAACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
rJMSF002K13+ GATTTCAACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
rJMFF025N06+ GATTTCAACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
rJMSF051H21+ ACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
rJMSF012N08+ CCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
rJMSF015D03+ GATTTCAACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
____________________________________________________________
consensus GATTTCAACCACAATGAAATGTTACGCATGATTGCTTGTGCAGCTGCTAGTGTCCGTCAT
. : . : . : . : . : . :
rJMSF023E16+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMSF002J13+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMSF002K13+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMFF025N06+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMSF051H21+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMSF012N08+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMSF032D22+ GACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
rJMSF015D03+ TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
____________________________________________________________
consensus TCTGCCAGGCGTCGACCTAGAATGAGCCAGGTAGTGAGGGCTCTAGAAGGAGATATGTCG
. : . : . : . : . : . :
rJMSF023E16+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMSF002J13+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMSF002K13+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMFF025N06+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMSF051H21+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMSF012N08+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMSF032D22+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
rJMSF015D03+ TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
____________________________________________________________
consensus TTGTCTGATCTTAACGAAGGAATCAGGCCGGGGCACAGTGCAGCATACGGAAGTTCATAC
. : . : . : . : . : . :
rJMSF023E16+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMSF002J13+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMSF002K13+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMFF025N06+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMSF051H21+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMSF012N08+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMSF032D22+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
rJMSF015D03+ GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
____________________________________________________________
consensus GAGAGTTCAGATTACGATGCAATGCAATACAACGAAGACATGAAGAAATTCAGAAAGATG
. : . : . : . : . : . :
rJMSF023E16+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMSF002J13+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMSF002K13+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMFF025N06+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMSF051H21+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMSF012N08+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMSF032D22+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
rJMSF015D03+ GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
____________________________________________________________
consensus GCCTTGGGAAGTCAAGAATATGGCAGCACTGGCCAGTACAGCAATCCAACCAGCGAATAC
. : . : . : . : . : . :
rJMSF023E16+ GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF002J13+ GGTTTAAACCCATCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF002K13+ GGTTTAAACCCATCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF006C18+ GATCGAGCAGCGAAGGNCAAACAACGCANGAAATNGAAATGGGT
rJMFF025N06+ GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF051H21+ GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF012N08+ GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF032D22+ GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
rJMSF015D03+ GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
____________________________________________________________
consensus GGTTTAAACCCGTCTGGATCGAGCAGCGAAGGCCAAACAACGCAAGAAATGGAAATGGGT
. : . : . : . : . : . :
rJMSF023E16+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF002J13+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF002K13+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF006C18+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGNGGCTTCAAC
rJMFF025N06+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF051H21+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF012N08+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF032D22+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
rJMSF015D03+ AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
____________________________________________________________
consensus AGGATGAGGAAAGACAGTAGAGGGTACGGTGGTAGTGGAAGTAAGGGCGGTGGCTTCAAC
. : . : . : . : . : . :
rJMSF023E16+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF002J13+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF002K13+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF006C18+ TGATNGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMFF025N06+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF051H21+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF012N08+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF032D22+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
rJMSF015D03+ TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
____________________________________________________________
consensus TGATCGAAGGTACTGTCGTCTATGTTCAGATGCGCATATCTGTGTGTATAAACTCTACAG
. : . : . : . : . : . :
rJMSF023E16+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF002J13+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF002K13+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF006C18+ GCTGCTANCTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCANC
rJMFF025N06+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF051H21+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF012N08+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF032D22+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
rJMSF015D03+ GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
____________________________________________________________
consensus GCTGCTAACTCTCTTACTGTCTCGGCAATTGCAAGAAACTGCGTGAATTGCTTAGCCAAC
. : . : . : . : . : . :
rJMSF023E16+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF002J13+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF002K13+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF006C18+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATNTTTTCCACAT
rJMFF025N06+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF051H21+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF012N08+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF032D22+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
rJMSF015D03+ GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
____________________________________________________________
consensus GAGCACATTTTTTTTTCCTGAATTTTGTGTGAAATATTCTTACATACATTTTTTCCACAT
. : . : . : . : . : . :
rJMSF023E16+ CATTGTATTTATTATGACCTATATATACACGAAAAA
rJMSF002J13+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMSF002K13+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMSF006C18+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMFF025N06+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMSF051H21+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMSF012N08+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMSF032D22+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
rJMSF015D03+ CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
____________________________________________________________
consensus CATTGTATTTATTATGACCTATATATACACGAAAAAAGGGATGAGATACTCTACTTTAAT
. : . : . : . : . : . :
rJMSF002J13+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTG
rJMSF002K13+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTGAACCCAC
rJMSF006C18+ TCTTTTCTGTTCATATCTNATTCAGAGACTTTTGTCTCAGCTTCTTGCTCT
rJMFF025N06+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTG
rJMSF051H21+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTGAACCCAC
rJMSF012N08+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTGAACCCAC
rJMSF032D22+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTGAACCCAC
rJMSF015D03+ TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTGAACCCACA
____________________________________________________________
consensus TCTTTTCTGTTCATATCTTATTCAGAGACTTTTGTCTCAGCTTCTTGCTCTGAACCCACA