Contig 008477:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014E17Sequence508006448 (2)ref|XP_009773502.1|7e-21PREDICTED: dentin sialophosphoprotein [Nicotiana sylvestris]779008477 (2)ref|XP_009608106.1|2e-12PREDICTED: dentin sialophosphoprotein [Nicotiana tomentosiformis]
JMSF042N24Sequence754006448 (2)ref|XP_002271492.1|1e-67PREDICTED: ell-associated factor Eaf [Vitis vinifera] emb|CAN62810.1| hypothetic690008477 (2)

Alignment

This contig is upended


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rJMSF014E17+           CAGTNGGATATATTGAATGATGATGTAGAGGTTGATACAGCAGCTAATGGAGGAGGGGA
                      ____________________________________________________________
consensus              CAGTNGGATATATTGAATGATGATGTAGAGGTTGATACAGCAGCTAATGGAGGAGGGGA
 
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rJMSF042N24+                                        TGACATTAACATACCGCATCAGAATGATAT
rJMSF014E17+          TATTATAGTGAAAGAAATCGATACTGGTATTGACATTAACATACCGCATCAGAATGATAT
                      ____________________________________________________________
consensus             TATTATAGTGAAAGAAATCGATACTGGTATTGACATTAACATACCGCATCAGAATGATAT
 
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rJMSF042N24+          GGATGATGAAATTGCGGATGTGGATGCAAGTGACGATGATGATAAGGGCCGTAATGCAGC
rJMSF014E17+          GGATGATGAAATTGCGGATGTGGATGCAAGTGACGATGATGATAAGGGCCGTAATGCAGC
                      ____________________________________________________________
consensus             GGATGATGAAATTGCGGATGTGGATGCAAGTGACGATGATGATAAGGGCCGTAATGCAGC
 
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rJMSF042N24+          AGAAGAGCTTAGAGCACAGGTGAATGCAGAAGAACGTGGTGAACACACTTCAAGTTCCAG
rJMSF014E17+          AGAAGAGCTTAGAGCACAGGTGAATGCAGAAGAACGTGGTGAACACACTTCAAGTTCCAG
                      ____________________________________________________________
consensus             AGAAGAGCTTAGAGCACAGGTGAATGCAGAAGAACGTGGTGAACACACTTCAAGTTCCAG
 
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rJMSF042N24+          CAGTAGCAGCGGGAGTGAGAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAGCAG
rJMSF014E17+          CAGTAGCAGCGGGAGTGAGAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAGCAG
                      ____________________________________________________________
consensus             CAGTAGCAGCGGGAGTGAGAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAGCAG
 
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rJMSF042N24+          AAGCAGAAGTGCAAGTGGCAGTGGCAGTAGTGACAGCGAGAGTAGCGATGCTGAAACTGT
rJMSF014E17+          AAGCAGAAGTGCAAGTGGCAGTGGCAGTAGTGACAGCGAGAGTAGCGATGCTGAAACTGT
                      ____________________________________________________________
consensus             AAGCAGAAGTGCAAGTGGCAGTGGCAGTAGTGACAGCGAGAGTAGCGATGCTGAAACTGT
 
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rJMSF042N24+          CAATTCTATCTGAGAATTTTATACCATCAGGATCCTGCCATTGTTGCCAAGTCTGGTATT
rJMSF014E17+          CAATTCTATCTGAGAATTTTATACCATCAGGATCCTGCCATTGTTGCCAAGTCTGGTATT
                      ____________________________________________________________
consensus             CAATTCTATCTGAGAATTTTATACCATCAGGATCCTGCCATTGTTGCCAAGTCTGGTATT
 
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rJMSF042N24+          GGCATGCCCCCACTTCAGTTTACTCTTCTCATCAGTTCCTGCTGTTAAAACTACTAATTA
rJMSF014E17+          GGCATGCCCCCACTTCAGTTTACTCTTCTCATCAGTTCCTGCTGTTAAAACTACTAATTA
                      ____________________________________________________________
consensus             GGCATGCCCCCACTTCAGTTTACTCTTCTCATCAGTTCCTGCTGTTAAAACTACTAATTA
 
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rJMSF042N24+          TCGCTGTAAACGGTAGCCTTGTGGATTCATTTGTTGTGTTAAAAGAGCACTTCCATCCGA
rJMSF014E17+          TCGCTGTAAACGGTAGCCTTGTGGATTCATTTGTTGTGTTAAAAGAGCACTTCCATCCGA
                      ____________________________________________________________
consensus             TCGCTGTAAACGGTAGCCTTGTGGATTCATTTGTTGTGTTAAAAGAGCACTTCCATCCGA
 
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rJMSF042N24+          ATTCCTCAATGTGTTGACATGGATTCTTTCACTAATGGTGTCAACCTAGTAGGCTCCCTT
rJMSF014E17+          ATTCCTCAATGTGTTGACATGGATTCTTTCACTAATGGTGTCAACCTAGTAGGCTCCCTT
                      ____________________________________________________________
consensus             ATTCCTCAATGTGTTGACATGGATTCTTTCACTAATGGTGTCAACCTAGTAGGCTCCCTT
 
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rJMSF042N24+          TGGATGTATGGAGGCAGCGATACTCGGGGATGCTTGATTTAATGATTTCGACATGGATGT
rJMSF014E17+          TGGATGTATGGAGGCAGCGATACTCGGGGATGCTTGATTTAATGATTTCGACATGGATGT
                      ____________________________________________________________
consensus             TGGATGTATGGAGGCAGCGATACTCGGGGATGCTTGATTTAATGATTTCGACATGGATGT
 
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rJMSF042N24+          AAACGCGGGAATGACTCTATCTGCTCTTGTGATTTGGACATTTTATTTTTGTTTTTCCAG
rJMSF014E17+          AAACGCGGGAATGACTCTATCTGCTCTTGTGATTTGGACATTTTATTTTTGTTTTTCCAG
                      ____________________________________________________________
consensus             AAACGCGGGAATGACTCTATCTGCTCTTGTGATTTGGACATTTTATTTTTGTTTTTCCAG
 
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rJMSF042N24+          CTTGAATTGTTCTATTTTATTTTTATTTTTTATTTTTGCTAATTCCAAAACAAATAGCAT
rJMSF014E17+          CTTGAATTGTTCTATTTTATTTTTATTTTTTATTTTTGCTAATTCCAAAACAAATAGCAT
                      ____________________________________________________________
consensus             CTTGAATTGTTCTATTTTATTTTTATTTTTTATTTTTGCTAATTCCAAAACAAATAGCAT