Contig 008476:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037E14+                                            CTAAACTCGCGAGGCCGGTCATCCAAA
                      ____________________________________________________________
consensus                                              CTAAACTCGCGAGGCCGGTCATCCAAA
 
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JMSF037E14+           TTGTCGAAAAAATAATCCGGCGGGTCTGAAATGACGGAGGAAACCTCCGACCGTCCACGC
rJMSF013M05+                                                                   CGC
                      ____________________________________________________________
consensus             TTGTCGAAAAAATAATCCGGCGGGTCTGAAATGACGGAGGAAACCTCCGACCGTCCACGC
 
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JMSF037E14+           TCCAAAACCGGTTCACAGTTAAGCGCGTCGATGAACCACTGCTCGCTCTTAGCCGAGCCG
rJMSF013M05+          TCCAAAACCGGTTCACAGTTAAGCGCGTCGATGAACCACTGCTCGCTNTTAGCCGAGCCG
                      ____________________________________________________________
consensus             TCCAAAACCGGTTCACAGTTAAGCGCGTCGATGAACCACTGCTCGCTCTTAGCCGAGCCG
 
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JMSF037E14+           TCGAGAATGGAGGTGATGGCGGAAGCCGGCGTGGAGTGATCAGCTTCGTTAGGGAAAAGG
rJMSF013M05+          TCGAGAATGGAGGTGATGGCGGAAGCCGGCGTGGAGTGATCAGCTTCGTTAGGGAAAAGG
                      ____________________________________________________________
consensus             TCGAGAATGGAGGTGATGGCGGAAGCCGGCGTGGAGTGATCAGCTTCGTTAGGGAAAAGG
 
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JMSF037E14+           AAGAGCCGCAACCGAGCCGACTTCTGAGCGGCGTGAACCAGCAGCCGGTCGTACTCCTCC
rJMSF013M05+          AAGAGCCGCAACCGAGCCGACTTCTGAGCGGCGTGAACCAGCAGCCGGTCGTACTCCTCC
                      ____________________________________________________________
consensus             AAGAGCCGCAACCGAGCCGACTTCTGAGCGGCGTGAACCAGCAGCCGGTCGTACTCCTCC
 
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JMSF037E14+           ACCATGTTCTCCACGTCCTCGTCGGAAGTGACGGTGATGAGAGCGTCCAGGTCCTCGTTG
rJMSF013M05+          ACCATGTTCTCCACGTCCTCGTCGGAAGTGACGGTGATGAGAGCGTCCAGGTCCTCGTTG
                      ____________________________________________________________
consensus             ACCATGTTCTCCACGTCCTCGTCGGAAGTGACGGTGATGAGAGCGTCCAGGTCCTCGTTG
 
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JMSF037E14+           GGGAGCTGGTATTTCAAGCACATATTCCCAAACCCCGACAGTTTTGACAGTTTGGCGACG
rJMSF013M05+          GGGAGCTGGTATTTCAAGCACATATTCCCAAACCCCGACAGTTTTGACAGTTTGGCGACG
                      ____________________________________________________________
consensus             GGGAGCTGGTATTTCAAGCACATATTCCCAAACCCCGACAGTTTTGACAGTTTGGCGACG
 
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JMSF037E14+           AGGGACGAGAAGTTGGTTCGACGGTCCACCGCCACTATGCGGGTGTCGCCGCCGACGTAG
rJMSF013M05+          AGGGACGAGAAGTTGGTTCGACGGTCCACCGCCACTATGCGGGTGTCGCCGCCGACGTAG
                      ____________________________________________________________
consensus             AGGGACGAGAAGTTGGTTCGACGGTCCACCGCCACTATGCGGGTGTCGCCGCCGACGTAG
 
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JMSF037E14+           CGCAGCTGATTGTCGAAAGGACGGGGGAGGATTTTCCCGCCGAAGCTGCACATCAAGCGC
rJMSF013M05+          CGCAGCTGATTGTCGAAAGGACGGGGGAGGATTTTCCCGCCGAAGCTGCACATCAAGCGC
                      ____________________________________________________________
consensus             CGCAGCTGATTGTCGAAAGGACGGGGGAGGATTTTCCCGCCGAAGCTGCACATCAAGCGC
 
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JMSF037E14+           ACCGGCGGCGACGGTTGCGCTTGCATGGAGGCGGCGGCGCCGTCGTCTCGGTACGAGCGC
rJMSF013M05+          ACCGGCGGCGACGGTTGCGCTTGCATGGAGGCGGCGGCGCCGTCGTCTCGGTACGAGCGC
                      ____________________________________________________________
consensus             ACCGGCGGCGACGGTTGCGCTTGCATGGAGGCGGCGGCGCCGTCGTCTCGGTACGAGCGC
 
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JMSF037E14+           GGAGTGGAAGTATTGGAACCATTCTCGGTTGCAAGATGGAGAGCCGCCATCACTGTAATT
rJMSF013M05+          GGAGTGGAAGTATTGGAACCATTCTCGGTTGCAAGATGGAGAGCCGCCATCACTGTAATT
                      ____________________________________________________________
consensus             GGAGTGGAAGTATTGGAACCATTCTCGGTTGCAAGATGGAGAGCCGCCATCACTGTAATT
 
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JMSF037E14+           AGAATGT                                                     
rJMSF013M05+          AGAATGTGGAGGGAGAATCAAGAATATTGGGGTATATATATTGTAAAAATAGTGGGCTCA
                      ____________________________________________________________
consensus             AGAATGTGGAGGGAGAATCAAGAATATTGGGGTATATATATTGTAAAAATAGTGGGCTCA
 
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rJMSF013M05+          CGGAATATAATGGGGTTAGGGTAGCAGGTACTGTTAGCGTAAATTCCATCTCAACATGGC
                      ____________________________________________________________
consensus             CGGAATATAATGGGGTTAGGGTAGCAGGTACTGTTAGCGTAAATTCCATCTCAACATGGC
 
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rJMSF013M05+          CTCCATGCATTCTAACTAGCTAGTTCATCTTGTTCTTGCAAGACCATACCACCAGGAATT
                      ____________________________________________________________
consensus             CTCCATGCATTCTAACTAGCTAGTTCATCTTGTTCTTGCAAGACCATACCACCAGGAATT